Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- extracellular 7
- endoplasmic reticulum 4
- vacuole 4
- plasma membrane 4
- golgi 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2A01G373000.1 | Wheat | extracellular | 75.41 | 81.85 |
| TraesCS2D01G369200.2 | Wheat | extracellular | 74.43 | 81.36 |
| TraesCS2B01G390000.1 | Wheat | extracellular | 74.43 | 80.78 |
| Zm00001d017377_P001 | Maize | extracellular | 68.2 | 77.61 |
| GSMUA_AchrUn_... | Banana | extracellular | 60.66 | 70.34 |
| GSMUA_Achr1P00120_001 | Banana | extracellular | 60.98 | 69.92 |
| VIT_12s0059g00190.t01 | Wine grape | extracellular | 57.05 | 67.18 |
| Bra026272.1-P | Field mustard | extracellular | 58.36 | 67.17 |
| CDY18990 | Canola | extracellular | 58.03 | 66.79 |
| GSMUA_Achr5P12080_001 | Banana | extracellular | 58.36 | 66.67 |
| KRH26935 | Soybean | extracellular | 57.05 | 66.67 |
| CDY58728 | Canola | extracellular | 57.7 | 66.42 |
| Bra024215.1-P | Field mustard | extracellular | 57.38 | 66.04 |
| CDY70556 | Canola | extracellular | 57.38 | 66.04 |
| AT4G28250.1 | Thale cress | extracellular | 57.05 | 65.91 |
| Solyc07g054170.2.1 | Tomato | extracellular | 56.07 | 64.04 |
| KRH25552 | Soybean | extracellular | 55.08 | 62.92 |
| KRH55988 | Soybean | extracellular | 55.08 | 62.92 |
| PGSC0003DMT400047177 | Potato | extracellular | 55.08 | 62.92 |
| AT2G20750.1 | Thale cress | extracellular | 55.74 | 62.73 |
| CDY05789 | Canola | extracellular | 54.43 | 62.64 |
| CDY31940 | Canola | extracellular | 54.1 | 62.26 |
| Bra036499.1-P | Field mustard | extracellular | 54.1 | 62.26 |
| KRH22402 | Soybean | extracellular | 52.13 | 61.63 |
| Solyc10g008440.2.1 | Tomato | extracellular | 52.46 | 61.07 |
| PGSC0003DMT400055827 | Potato | extracellular | 51.8 | 60.31 |
| Zm00001d026171_P001 | Maize | extracellular | 27.21 | 42.56 |
| Zm00001d051368_P001 | Maize | extracellular | 21.64 | 41.77 |
| Zm00001d017493_P001 | Maize | extracellular | 36.07 | 41.2 |
| Zm00001d045861_P001 | Maize | mitochondrion | 35.08 | 40.38 |
| Zm00001d045792_P001 | Maize | extracellular | 35.08 | 39.63 |
| Zm00001d017495_P001 | Maize | extracellular | 38.03 | 39.46 |
| Zm00001d017494_P001 | Maize | extracellular | 38.03 | 39.19 |
| Zm00001d026170_P001 | Maize | extracellular | 33.44 | 38.93 |
| Zm00001d029903_P002 | Maize | extracellular | 33.11 | 37.83 |
| Zm00001d026169_P001 | Maize | extracellular | 36.07 | 37.67 |
| Zm00001d047090_P002 | Maize | extracellular | 33.11 | 37.41 |
| Zm00001d029906_P001 | Maize | extracellular | 32.46 | 36.94 |
| Zm00001d047089_P001 | Maize | extracellular | 32.13 | 36.7 |
| Zm00001d047147_P001 | Maize | extracellular | 31.8 | 36.06 |
| Zm00001d047146_P001 | Maize | extracellular | 31.8 | 36.06 |
| Zm00001d047142_P001 | Maize | extracellular | 31.8 | 36.06 |
| Zm00001d047135_P011 | Maize | extracellular | 31.8 | 36.06 |
| Zm00001d047093_P001 | Maize | extracellular | 31.15 | 35.98 |
| Zm00001d027281_P001 | Maize | extracellular | 31.8 | 35.53 |
| Zm00001d029907_P001 | Maize | extracellular | 31.48 | 35.16 |
| Zm00001d047091_P001 | Maize | extracellular | 31.15 | 34.8 |
| Zm00001d017740_P001 | Maize | extracellular | 28.85 | 34.78 |
| Zm00001d019560_P001 | Maize | plasma membrane | 35.08 | 34.74 |
| Zm00001d017735_P001 | Maize | extracellular | 28.52 | 34.39 |
| Zm00001d017736_P001 | Maize | cytosol | 21.64 | 34.2 |
| Zm00001d029913_P001 | Maize | extracellular | 30.82 | 34.06 |
| Zm00001d029827_P001 | Maize | extracellular | 25.57 | 33.91 |
| Zm00001d040608_P001 | Maize | extracellular | 29.51 | 33.58 |
| Zm00001d029899_P001 | Maize | extracellular, mitochondrion | 30.82 | 33.33 |
| Zm00001d040609_P001 | Maize | extracellular | 29.18 | 33.09 |
| Zm00001d017731_P001 | Maize | extracellular | 25.25 | 33.05 |
| Zm00001d047096_P001 | Maize | extracellular | 30.49 | 32.98 |
| Zm00001d017737_P001 | Maize | extracellular | 29.18 | 32.96 |
| Zm00001d048384_P001 | Maize | extracellular | 28.85 | 32.71 |
| Zm00001d017732_P001 | Maize | extracellular | 28.85 | 32.59 |
| Zm00001d017733_P001 | Maize | extracellular | 28.85 | 32.59 |
| Zm00001d047087_P001 | Maize | extracellular | 30.16 | 32.17 |
| Zm00001d047094_P001 | Maize | extracellular | 28.85 | 31.54 |
| Zm00001d027283_P001 | Maize | extracellular | 32.79 | 31.45 |
| Zm00001d004586_P001 | Maize | extracellular | 32.13 | 31.31 |
| Zm00001d019557_P001 | Maize | extracellular, plastid | 28.85 | 30.45 |
| Zm00001d017741_P001 | Maize | extracellular | 15.08 | 28.93 |
| Zm00001d029783_P003 | Maize | extracellular | 24.26 | 26.91 |
| Zm00001d027520_P001 | Maize | extracellular | 23.61 | 25.9 |
| Zm00001d006360_P001 | Maize | extracellular | 22.95 | 25.74 |
| Zm00001d048344_P002 | Maize | extracellular | 21.31 | 23.72 |
| Zm00001d014826_P001 | Maize | endoplasmic reticulum, extracellular, vacuole | 21.64 | 20.69 |
| Zm00001d017734_P001 | Maize | cytosol | 28.85 | 19.21 |
| Zm00001d033231_P003 | Maize | extracellular | 31.15 | 13.31 |
Protein Annotations
| EntrezGene:100283681 | Gene3D:2.40.40.10 | MapMan:35.1 | UniProt:A0A1D6E4U7 | InterPro:Expan_Lol_pI | InterPro:Expansin/allergen_DPBB_dom |
| InterPro:Expansin_CBD | InterPro:Expansin_CBD_sf | GO:GO:0000003 | GO:GO:0005575 | GO:GO:0005576 | GO:GO:0008150 |
| GO:GO:0019953 | InterPro:IPR007112 | InterPro:IPR007117 | InterPro:IPR036749 | InterPro:IPR036908 | InterPro:LolPI |
| ProteinID:ONM15520.1 | PFAM:PF01357 | PFAM:PF03330 | PRINTS:PR00829 | PRINTS:PR01225 | PFscan:PS50842 |
| PFscan:PS50843 | PANTHER:PTHR31692 | PANTHER:PTHR31692:SF48 | InterPro:RlpA-like_DPBB | InterPro:RlpA-like_sf | SMART:SM00837 |
| SUPFAM:SSF49590 | SUPFAM:SSF50685 | SignalP:SignalP-noTM | TMHMM:TMhelix | UniParc:UPI0008455A9F | EnsemblPlantsGene:Zm00001d002860 |
| EnsemblPlants:Zm00001d002860_P002 | EnsemblPlants:Zm00001d002860_T002 | SEG:seg | : | : | : |
Description
Expansin-B3
Coordinates
chr2:-:24851162..24854883
Molecular Weight (calculated)
32888.6 Da
IEP (calculated)
9.206
GRAVY (calculated)
-0.006
Length
305 amino acids
Sequence
(BLAST)
(BLAST)
001: MASSRALALA LFLLCALLPA PPVSATLLFG GGESAKKAGV DAEWRPATAT WYGEAEGDGS DGGACGYGTL VDVVPMKARV GSVSPVLFKD GEGCGACYKV
101: RCLDRGVCSR RAVTVVVTDE CPGGLCAFGR THFDLSGAAF SRMAVAGAGG RLRDRGQLSV VYRRTACKYG GKNIAFRVNE GSTNFWLSLL VEFEDGEGDI
201: GSMQIKQLES VCFNLLFGTK KVRTDIQFRA EWHAAKRSAN SVEWLDMRHV WGATWCLVRG PLVGPFSVRL TTLSARKTLT ARDVIPRNWT PKATYTSRLN
301: FQPSL
101: RCLDRGVCSR RAVTVVVTDE CPGGLCAFGR THFDLSGAAF SRMAVAGAGG RLRDRGQLSV VYRRTACKYG GKNIAFRVNE GSTNFWLSLL VEFEDGEGDI
201: GSMQIKQLES VCFNLLFGTK KVRTDIQFRA EWHAAKRSAN SVEWLDMRHV WGATWCLVRG PLVGPFSVRL TTLSARKTLT ARDVIPRNWT PKATYTSRLN
301: FQPSL
001: MQLFPVMLAT LCIVLQLLIG SSALATTNRH VSNSHWLPAV ATWYGSPNGD GSDGGACGYG TLVDVKPLHA RVGAVNPILF KNGEGCGACY KVRCLDKSIC
101: SRRAVTVIIT DECPGCSKTS THFDLSGAVF GRLAIAGESG PLRNRGLIPV IYRRTACKYR GKNIAFHVNE GSTDFWLSLL VEFEDGEGDI GSMHIRQAGA
201: REWLEMKHVW GANWCIIGGP LKGPFSIKLT TLSAGKTLSA TDVVPRNWAP KATYSSRLNF SPVL
101: SRRAVTVIIT DECPGCSKTS THFDLSGAVF GRLAIAGESG PLRNRGLIPV IYRRTACKYR GKNIAFHVNE GSTDFWLSLL VEFEDGEGDI GSMHIRQAGA
201: REWLEMKHVW GANWCIIGGP LKGPFSIKLT TLSAGKTLSA TDVVPRNWAP KATYSSRLNF SPVL
Arabidopsis Description
EXPB3EXPB3 [Source:UniProtKB/TrEMBL;Acc:A0A178USU9]
SUBAcon: [extracellular]
SUBAcon: [extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.