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Maize
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Maize
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular

Predictor Summary:
  • extracellular 6
  • endoplasmic reticulum 4
  • vacuole 5
  • plasma membrane 4
  • golgi 4
Predictors GFP MS/MS Papers
Winner Takes All:extracellular
Any Predictor:secretory
iPSORT:secretory
MultiLoc:extracellular
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:vacuole
YLoc:extracellular
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
KXG40417 Sorghum mitochondrion 89.74 82.49
TraesCS5A01G538000.1 Wheat extracellular 74.36 71.48
Zm00001d029899_P001 Maize extracellular, mitochondrion 72.89 70.57
TraesCS4B01G375200.1 Wheat extracellular 74.73 69.86
Os03t0102500-01 Rice extracellular 70.33 69.57
Zm00001d047087_P001 Maize extracellular 71.43 68.18
TraesCS4D01G361900.1 Wheat extracellular 73.99 68.01
Zm00001d029906_P001 Maize extracellular 65.2 66.42
Zm00001d029903_P002 Maize extracellular 64.84 66.29
Zm00001d047089_P001 Maize extracellular 64.1 65.54
Zm00001d047090_P002 Maize extracellular 64.1 64.81
Zm00001d047093_P001 Maize extracellular 57.14 59.09
Zm00001d047091_P001 Maize extracellular 57.88 57.88
Zm00001d029907_P001 Maize extracellular 56.78 56.78
Zm00001d029913_P001 Maize extracellular 55.31 54.71
Zm00001d047094_P001 Maize extracellular 54.58 53.41
Zm00001d047096_P001 Maize extracellular 54.21 52.48
Zm00001d047142_P001 Maize extracellular 51.65 52.42
Zm00001d004586_P001 Maize extracellular 60.07 52.4
Zm00001d027283_P001 Maize extracellular 60.81 52.2
Zm00001d047147_P001 Maize extracellular 51.28 52.04
Zm00001d047146_P001 Maize extracellular 51.28 52.04
Zm00001d047135_P011 Maize extracellular 50.92 51.67
Zm00001d017736_P001 Maize cytosol 35.9 50.78
Zm00001d017740_P001 Maize extracellular 45.05 48.62
Zm00001d017735_P001 Maize extracellular 45.05 48.62
Zm00001d017741_P001 Maize extracellular 27.47 47.17
Zm00001d017737_P001 Maize extracellular 46.15 46.67
Zm00001d040608_P001 Maize extracellular 45.79 46.64
Zm00001d040609_P001 Maize extracellular 45.79 46.47
Zm00001d017733_P001 Maize extracellular 45.79 46.3
Zm00001d017732_P001 Maize extracellular 45.79 46.3
Zm00001d048384_P001 Maize extracellular 45.42 46.1
Zm00001d017731_P001 Maize extracellular 38.83 45.49
Zm00001d026170_P001 Maize extracellular 43.22 45.04
Zm00001d026171_P001 Maize extracellular 31.87 44.62
Zm00001d017493_P001 Maize extracellular 43.59 44.57
Zm00001d051368_P001 Maize extracellular 25.64 44.3
Zm00001d045861_P001 Maize mitochondrion 42.86 44.15
Zm00001d045792_P001 Maize extracellular 42.86 43.33
Zm00001d017495_P001 Maize extracellular 45.79 42.52
Zm00001d029827_P001 Maize extracellular 35.53 42.17
Zm00001d017494_P001 Maize extracellular 45.42 41.89
Zm00001d026169_P001 Maize extracellular 44.32 41.44
Zm00001d017377_P001 Maize extracellular 37.73 38.43
Zm00001d019560_P001 Maize plasma membrane 43.22 38.31
Zm00001d019557_P001 Maize extracellular, plastid 35.16 33.22
Zm00001d002860_P002 Maize extracellular 35.53 31.8
Zm00001d017734_P001 Maize cytosol 46.52 27.73
Zm00001d006360_P001 Maize extracellular 24.91 25.0
Zm00001d027520_P001 Maize extracellular 24.54 24.1
Zm00001d048344_P002 Maize extracellular 24.18 24.09
Zm00001d029783_P003 Maize extracellular 23.08 22.91
Zm00001d014826_P001 Maize endoplasmic reticulum, extracellular, vacuole 19.78 16.93
Zm00001d033231_P003 Maize extracellular 42.12 16.11
Protein Annotations
EntrezGene:103630483Gene3D:2.40.40.10Gene3D:2.60.40.760MapMan:35.1UniProt:A0A1D6JK16InterPro:Expan_Lol_pI
InterPro:Expansin/allergen_DPBB_domInterPro:Expansin_CBDInterPro:Expansin_CBD_sfGO:GO:0000003GO:GO:0005575GO:GO:0005576
GO:GO:0008150GO:GO:0019953InterPro:IPR007112InterPro:IPR007117InterPro:IPR036749InterPro:IPR036908
InterPro:LolPIProteinID:ONL92597.1PFAM:PF01357PFAM:PF03330PRINTS:PR00829PRINTS:PR01225
PFscan:PS50842PFscan:PS50843PANTHER:PTHR31692PANTHER:PTHR31692:SF20InterPro:RlpA-like_DPBBInterPro:RlpA-like_sf
SMART:SM00837SUPFAM:SSF49590SUPFAM:SSF50685SignalP:SignalP-noTMTMHMM:TMhelixUniParc:UPI0002214DDF
EnsemblPlantsGene:Zm00001d027281EnsemblPlants:Zm00001d027281_P001EnsemblPlants:Zm00001d027281_T001SEG:seg::
Description
Expansin-B4
Coordinates
chr1:-:1610483..1611686
Molecular Weight (calculated)
30201.9 Da
IEP (calculated)
8.905
GRAVY (calculated)
-0.312
Length
273 amino acids
Sequence
(BLAST)
001: MGMGSLLSLY LLPRAVFLLL AACCSFASGG VNNYNTSDAA ARQLQWGNAR ATWYGQPNGA GPYDNGGACG FKNVNQYPFM AMTSCGNQPL YRDGKGCGSC
101: YKIRCSKHAA CSGRTETVVI TDMNYTPGVA PYHFDLSGTA FGRLAKPGRN DDLRRAGIID IQFARVPCEF PGLKVGFHVE EGSTQVYFAV LVEYENGDGD
201: VVQVDLMEKR ARRWTPMSQS WGSIWRLDSN HRLQPPFSIR TRTDSGKTLV ARDVIPLNWR PNTFYRSIVQ YSS
Best Arabidopsis Sequence Match ( AT1G65680.1 )
(BLAST)
001: MTILVVDRYY MLMNLLFALT CLLLNLTHCF SPKKFNISAA TTSDSDWSIA GSTWYGNPTG YGSDGGACGY GNAVAQPPFS KMVSAGGPSL FKSGKGCGAC
101: YQVKCTSKSA CSKNPVTVVI TDECPGCVKE SVHFDLSGTA FGAMAISGQD SQLRNVGELQ ILYKKVECNY IGKTVTFQVD KGSNANSFAV LVAYVNGDGE
201: IGRIELKQAL DSDKWLSMSQ SWGAVWKLDV SSPLRAPLSL RVTSLESGKT VVASNVIPAN WQPGAIYKSN VNF
Arabidopsis Description
EXPB2Putative expansin-B2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SHY6]
SUBAcon: [extracellular]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.