Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- plastid 2
- extracellular 6
- endoplasmic reticulum 4
- vacuole 4
- plasma membrane 4
- golgi 4
Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
extracellular:
20408568
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
Zm00001d047096_P001 | Maize | extracellular | 88.04 | 86.17 |
Zm00001d047093_P001 | Maize | extracellular | 64.13 | 67.05 |
Zm00001d029906_P001 | Maize | extracellular | 64.13 | 66.04 |
Zm00001d029903_P002 | Maize | extracellular | 63.77 | 65.92 |
Zm00001d047090_P002 | Maize | extracellular | 64.13 | 65.56 |
Zm00001d047089_P001 | Maize | extracellular | 63.41 | 65.54 |
Zm00001d029907_P001 | Maize | extracellular | 64.13 | 64.84 |
Zm00001d047091_P001 | Maize | extracellular | 63.41 | 64.1 |
Zm00001d029899_P001 | Maize | extracellular, mitochondrion | 60.14 | 58.87 |
Zm00001d047087_P001 | Maize | extracellular | 60.51 | 58.39 |
Zm00001d027283_P001 | Maize | extracellular | 66.67 | 57.86 |
Zm00001d004586_P001 | Maize | extracellular | 63.77 | 56.23 |
Zm00001d027281_P001 | Maize | extracellular | 54.71 | 55.31 |
Zm00001d047094_P001 | Maize | extracellular | 55.43 | 54.84 |
Zm00001d017736_P001 | Maize | cytosol | 37.68 | 53.89 |
Zm00001d017741_P001 | Maize | extracellular | 30.43 | 52.83 |
Zm00001d047147_P001 | Maize | extracellular | 51.09 | 52.42 |
Zm00001d047146_P001 | Maize | extracellular | 51.09 | 52.42 |
Zm00001d047135_P011 | Maize | extracellular | 50.72 | 52.04 |
Zm00001d047142_P001 | Maize | extracellular | 50.36 | 51.67 |
Zm00001d017740_P001 | Maize | extracellular | 46.01 | 50.2 |
Zm00001d017735_P001 | Maize | extracellular | 45.65 | 49.8 |
Zm00001d040608_P001 | Maize | extracellular | 47.83 | 49.25 |
Zm00001d026171_P001 | Maize | extracellular | 34.42 | 48.72 |
Zm00001d040609_P001 | Maize | extracellular | 47.46 | 48.7 |
Zm00001d017731_P001 | Maize | extracellular | 40.94 | 48.5 |
Zm00001d048384_P001 | Maize | extracellular | 47.1 | 48.33 |
Zm00001d017737_P001 | Maize | extracellular | 47.1 | 48.15 |
Zm00001d017493_P001 | Maize | extracellular | 45.65 | 47.19 |
Zm00001d017732_P001 | Maize | extracellular | 46.01 | 47.04 |
Zm00001d017733_P001 | Maize | extracellular | 46.01 | 47.04 |
Zm00001d026170_P001 | Maize | extracellular | 44.57 | 46.95 |
Zm00001d051368_P001 | Maize | extracellular | 26.09 | 45.57 |
Zm00001d045861_P001 | Maize | mitochondrion | 43.48 | 45.28 |
Zm00001d045792_P001 | Maize | extracellular | 43.84 | 44.81 |
Zm00001d029827_P001 | Maize | extracellular | 37.32 | 44.78 |
Zm00001d026169_P001 | Maize | extracellular | 46.01 | 43.49 |
Zm00001d017495_P001 | Maize | extracellular | 44.93 | 42.18 |
Zm00001d017494_P001 | Maize | extracellular | 43.12 | 40.2 |
Zm00001d019560_P001 | Maize | plasma membrane | 40.58 | 36.36 |
Zm00001d017377_P001 | Maize | extracellular | 34.78 | 35.82 |
Zm00001d002860_P002 | Maize | extracellular | 34.06 | 30.82 |
Zm00001d019557_P001 | Maize | extracellular, plastid | 32.25 | 30.8 |
Zm00001d017734_P001 | Maize | cytosol | 46.38 | 27.95 |
Zm00001d048344_P002 | Maize | extracellular | 22.83 | 22.99 |
Zm00001d027520_P001 | Maize | extracellular | 22.46 | 22.3 |
Zm00001d006360_P001 | Maize | extracellular | 21.01 | 21.32 |
Zm00001d029783_P003 | Maize | extracellular | 21.01 | 21.09 |
Zm00001d033231_P003 | Maize | extracellular | 43.48 | 16.81 |
Zm00001d014826_P001 | Maize | endoplasmic reticulum, extracellular, vacuole | 18.84 | 16.3 |
Protein Annotations
Gene3D:2.40.40.10 | Gene3D:2.60.40.760 | MapMan:35.1 | EntrezGene:542566 | EMBL:AF332179 | EMBL:BT033243 |
EMBL:EU969807 | InterPro:Expan_Lol_pI | InterPro:Expansin/allergen_DPBB_dom | InterPro:Expansin_CBD | InterPro:Expansin_CBD_sf | GO:GO:0000003 |
GO:GO:0005575 | GO:GO:0005576 | GO:GO:0008150 | GO:GO:0019953 | InterPro:IPR007112 | InterPro:IPR007117 |
InterPro:IPR036749 | InterPro:IPR036908 | InterPro:LolPI | ProteinID:ONL99838.1 | PFAM:PF01357 | PFAM:PF03330 |
PRINTS:PR00829 | PRINTS:PR01225 | PFscan:PS50842 | PFscan:PS50843 | PANTHER:PTHR31692 | PANTHER:PTHR31692:SF17 |
UniProt:Q94KS8 | InterPro:RlpA-like_DPBB | InterPro:RlpA-like_sf | SMART:SM00837 | SUPFAM:SSF49590 | SUPFAM:SSF50685 |
SignalP:SignalP-noTM | UniParc:UPI00000A9D70 | EnsemblPlantsGene:Zm00001d029913 | EnsemblPlants:Zm00001d029913_P001 | EnsemblPlants:Zm00001d029913_T001 | SEG:seg |
Description
beta expansin6Expansin-B4
Coordinates
chr1:+:93847218..93848525
Molecular Weight (calculated)
30266.0 Da
IEP (calculated)
8.644
GRAVY (calculated)
-0.254
Length
276 amino acids
Sequence
(BLAST)
(BLAST)
001: MATALSFKAL ALAALLSMVV ASGARAEQQF KRNATTASQD RSLLSYSSGW LPAKATWYGA PTGAGPLDNG GACGFKGTNQ YPFSSMTSCG NEPIFKDGKG
101: CGSCYQIRCL KSNHPACSGV AQTVIITDMN YYPVAKYHFD LSGTAFGSMA SWGLNDKLRH AGIIDMQFRR VPCNFPGLTI TFRVQHGSNP MYLAVLIEHE
201: NKDGDVVQAD IMQSNSGHWE PMHESWGSIW RIDPNRPLRG PFSMRITNES GRQLVAKNVI PANYIPDVDY RSFVQY
101: CGSCYQIRCL KSNHPACSGV AQTVIITDMN YYPVAKYHFD LSGTAFGSMA SWGLNDKLRH AGIIDMQFRR VPCNFPGLTI TFRVQHGSNP MYLAVLIEHE
201: NKDGDVVQAD IMQSNSGHWE PMHESWGSIW RIDPNRPLRG PFSMRITNES GRQLVAKNVI PANYIPDVDY RSFVQY
001: MTILVVDRYY MLMNLLFALT CLLLNLTHCF SPKKFNISAA TTSDSDWSIA GSTWYGNPTG YGSDGGACGY GNAVAQPPFS KMVSAGGPSL FKSGKGCGAC
101: YQVKCTSKSA CSKNPVTVVI TDECPGCVKE SVHFDLSGTA FGAMAISGQD SQLRNVGELQ ILYKKVECNY IGKTVTFQVD KGSNANSFAV LVAYVNGDGE
201: IGRIELKQAL DSDKWLSMSQ SWGAVWKLDV SSPLRAPLSL RVTSLESGKT VVASNVIPAN WQPGAIYKSN VNF
101: YQVKCTSKSA CSKNPVTVVI TDECPGCVKE SVHFDLSGTA FGAMAISGQD SQLRNVGELQ ILYKKVECNY IGKTVTFQVD KGSNANSFAV LVAYVNGDGE
201: IGRIELKQAL DSDKWLSMSQ SWGAVWKLDV SSPLRAPLSL RVTSLESGKT VVASNVIPAN WQPGAIYKSN VNF
Arabidopsis Description
EXPB2Putative expansin-B2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SHY6]
SUBAcon: [extracellular]
SUBAcon: [extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.