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Maize
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Maize
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular

Predictor Summary:
  • plastid 1
  • extracellular 4
  • endoplasmic reticulum 2
  • vacuole 2
  • plasma membrane 2
  • golgi 2
  • cytosol 1
Predictors GFP MS/MS Papers
Winner Takes All:extracellular
Any Predictor:plastid, secretory
iPSORT:plastid
MultiLoc:extracellular
Predotar:secretory
PProwler:secretory
WoLF PSORT:cytosol
YLoc:extracellular
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d017735_P001 Maize extracellular 97.23 97.23
Zm00001d017736_P001 Maize cytosol 71.94 94.3
Zm00001d017737_P001 Maize extracellular 97.63 91.48
Zm00001d017732_P001 Maize extracellular 97.23 91.11
Zm00001d017733_P001 Maize extracellular 96.84 90.74
Zm00001d040608_P001 Maize extracellular 92.89 87.69
Zm00001d048384_P001 Maize extracellular 92.89 87.36
Zm00001d017731_P001 Maize extracellular 79.84 86.7
Zm00001d040609_P001 Maize extracellular 92.09 86.62
Zm00001d017741_P001 Maize extracellular 54.15 86.16
OQU93456 Sorghum cytosol, extracellular 69.96 83.49
EER95683 Sorghum extracellular 84.98 80.83
OQU93457 Sorghum extracellular 84.98 80.83
OQU93458 Sorghum extracellular 84.98 80.83
OQU93459 Sorghum extracellular 84.98 80.83
EER95684 Sorghum extracellular 84.19 80.08
OQU93455 Sorghum extracellular 80.63 79.69
Os03t0106800-01 Rice plasma membrane 68.38 64.79
Os03t0106500-01 Rice plasma membrane 67.19 63.67
Os03t0106900-00 Rice extracellular 67.19 63.67
HORVU4Hr1G086830.1 Barley extracellular 64.82 61.65
TraesCS4D01G355700.1 Wheat extracellular 64.82 61.19
TraesCS4D01G355100.1 Wheat extracellular 65.22 61.11
TraesCS4D01G355800.1 Wheat extracellular 65.22 61.11
TraesCS4B01G362100.1 Wheat extracellular 65.22 61.11
Os03t0106700-00 Rice extracellular 54.94 60.96
TraesCS4B01G362600.1 Wheat extracellular, unclear 64.82 60.74
TraesCS4B01G362500.1 Wheat extracellular 64.82 60.74
TraesCS5A01G530100.1 Wheat extracellular 64.82 60.74
TraesCS5A01G530700.1 Wheat extracellular 64.82 60.74
HORVU4Hr1G086930.1 Barley extracellular 64.43 59.49
HORVU4Hr1G087070.2 Barley extracellular, mitochondrion, peroxisome 64.82 58.36
Zm00001d047146_P001 Maize extracellular 60.87 57.25
Zm00001d047147_P001 Maize extracellular 60.87 57.25
Zm00001d047135_P011 Maize extracellular 60.47 56.88
Zm00001d047142_P001 Maize extracellular 60.47 56.88
Zm00001d017734_P001 Maize cytosol 97.63 53.93
Zm00001d029906_P001 Maize extracellular 53.36 50.37
Zm00001d047090_P002 Maize extracellular 53.75 50.37
Zm00001d047089_P001 Maize extracellular 52.57 49.81
Zm00001d029903_P002 Maize extracellular 52.57 49.81
Zm00001d029827_P001 Maize extracellular 45.06 49.57
Zm00001d047091_P001 Maize extracellular 50.59 46.89
Zm00001d047096_P001 Maize extracellular 52.17 46.81
Zm00001d029913_P001 Maize extracellular 50.2 46.01
Zm00001d029907_P001 Maize extracellular 49.41 45.79
Zm00001d029899_P001 Maize extracellular, mitochondrion 50.59 45.39
Zm00001d047094_P001 Maize extracellular 49.8 45.16
Zm00001d047093_P001 Maize extracellular 47.04 45.08
Zm00001d027281_P001 Maize extracellular 48.62 45.05
Zm00001d047087_P001 Maize extracellular 49.8 44.06
Zm00001d004586_P001 Maize extracellular 53.36 43.13
Zm00001d026171_P001 Maize extracellular 32.81 42.56
Zm00001d027283_P001 Maize extracellular 53.36 42.45
Zm00001d051368_P001 Maize extracellular 26.09 41.77
Zm00001d026170_P001 Maize extracellular 42.29 40.84
Zm00001d045861_P001 Maize mitochondrion 41.11 39.25
Zm00001d026169_P001 Maize extracellular 45.06 39.04
Zm00001d045792_P001 Maize extracellular 41.5 38.89
Zm00001d017494_P001 Maize extracellular 45.06 38.51
Zm00001d017495_P001 Maize extracellular 44.66 38.44
Zm00001d017493_P001 Maize extracellular 40.32 38.2
Zm00001d017377_P001 Maize extracellular 36.76 34.7
Zm00001d019560_P001 Maize plasma membrane 41.9 34.42
Zm00001d002860_P002 Maize extracellular 34.78 28.85
Zm00001d019557_P001 Maize extracellular, plastid 32.41 28.37
Zm00001d029783_P003 Maize extracellular 26.09 24.0
Zm00001d048344_P002 Maize extracellular 25.3 23.36
Zm00001d027520_P001 Maize extracellular 25.3 23.02
Zm00001d006360_P001 Maize extracellular 24.51 22.79
Zm00001d014826_P001 Maize endoplasmic reticulum, extracellular, vacuole 22.53 17.87
Zm00001d033231_P003 Maize extracellular 41.5 14.71
Protein Annotations
Gene3D:2.40.40.10Gene3D:2.60.40.760MapMan:35.1UniProt:A0A1D6HH73ProteinID:AQK73908.1InterPro:Expan_Lol_pI
InterPro:Expansin/allergen_DPBB_domInterPro:Expansin_CBDInterPro:Expansin_CBD_sfGO:GO:0000003GO:GO:0005575GO:GO:0005576
GO:GO:0008150GO:GO:0019953InterPro:IPR007112InterPro:IPR007117InterPro:IPR036749InterPro:IPR036908
InterPro:LolPIPFAM:PF01357PFAM:PF03330PRINTS:PR00829PRINTS:PR01225PFscan:PS50842
PFscan:PS50843PANTHER:PTHR31692PANTHER:PTHR31692:SF21InterPro:RlpA-like_DPBBInterPro:RlpA-like_sfSMART:SM00837
SUPFAM:SSF49590SUPFAM:SSF50685SignalP:SignalP-noTMUniParc:UPI0008456E5BEnsemblPlantsGene:Zm00001d017740EnsemblPlants:Zm00001d017740_P001
EnsemblPlants:Zm00001d017740_T001SEG:seg::::
Description
Expansin-B4
Coordinates
chr5:-:205615626..205616553
Molecular Weight (calculated)
27257.6 Da
IEP (calculated)
8.125
GRAVY (calculated)
-0.350
Length
253 amino acids
Sequence
(BLAST)
001: MAMALAFLVS GAWCGPPKVP PGKNITATYG KDWLDAKATW YGKPTGAGPD DNGGGCGYKD VNKPPFNSMG ACGNIPIFKD GLGCGSCFEI KCDKPVECSG
101: KPVVVHITDM NYEPIAAYHF DLAGTAFGAM AKNGEEEKLR KAGIIDMQFR RVKCKYGSKV TFHLEKGCGP NYLALLVNYV DGDGDIVAVD VKEKGSDTYE
201: PLKHSWGAIW RKDSDKPLKG PLTVRLTTEG GTKTVYDDVI PANWKANTAY TAK
Best Arabidopsis Sequence Match ( AT1G65680.1 )
(BLAST)
001: MTILVVDRYY MLMNLLFALT CLLLNLTHCF SPKKFNISAA TTSDSDWSIA GSTWYGNPTG YGSDGGACGY GNAVAQPPFS KMVSAGGPSL FKSGKGCGAC
101: YQVKCTSKSA CSKNPVTVVI TDECPGCVKE SVHFDLSGTA FGAMAISGQD SQLRNVGELQ ILYKKVECNY IGKTVTFQVD KGSNANSFAV LVAYVNGDGE
201: IGRIELKQAL DSDKWLSMSQ SWGAVWKLDV SSPLRAPLSL RVTSLESGKT VVASNVIPAN WQPGAIYKSN VNF
Arabidopsis Description
EXPB2Putative expansin-B2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SHY6]
SUBAcon: [extracellular]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.