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Maize
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Maize
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • plastid 2
  • extracellular 6
  • endoplasmic reticulum 4
  • vacuole 4
  • plasma membrane 4
  • golgi 4
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:plastid, secretory
ChloroP:plastid
iPSORT:secretory
MultiLoc:extracellular
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plastid
YLoc:extracellular
 plasma membrane: 27341663
msms PMID: 27341663 doi
P Voothuluru, JC Anderson, RE Sharp, SC Peck
Bond Life Sciences Center, University of Missouri, Columbia, MO, 65211, USA., Division of Biochemistry, University of Missouri, Columbia, MO, 65211, USA., Division of Plant Sciences, University of Missouri, Columbia, MO, 65211, USA., Interdisciplinary Plant Group, University of Missouri, Columbia, MO, 65211, USA.
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
EER98449 Sorghum extracellular 92.21 91.03
TraesCS6A01G249300.1 Wheat extracellular 69.81 74.39
TraesCS6D01G231300.1 Wheat extracellular 69.48 74.05
TraesCS6B01G275700.1 Wheat extracellular 68.51 73.01
TraesCS6A01G249200.1 Wheat extracellular 67.21 72.13
TraesCS3D01G482800.1 Wheat extracellular 67.21 71.88
TraesCS6B01G275800.1 Wheat extracellular 66.56 71.43
TraesCS6D01G231200.1 Wheat extracellular 66.56 71.43
HORVU0Hr1G018320.1 Barley extracellular 66.88 71.28
TraesCS3B01G535800.1 Wheat extracellular 66.23 70.59
Zm00001d017495_P001 Maize extracellular 67.21 70.41
TraesCS3A01G488000.1 Wheat extracellular 65.58 69.9
HORVU0Hr1G016410.1 Barley extracellular 64.61 69.34
HORVU6Hr1G063180.1 Barley extracellular 64.61 69.34
Zm00001d017494_P001 Maize extracellular 66.56 69.26
Zm00001d019557_P001 Maize extracellular, plastid 62.99 67.13
Zm00001d026171_P001 Maize extracellular 36.69 57.95
Zm00001d051368_P001 Maize extracellular 28.57 55.7
Zm00001d017493_P001 Maize extracellular 47.73 55.06
Zm00001d026170_P001 Maize extracellular 46.75 54.96
Zm00001d026169_P001 Maize extracellular 49.35 52.05
Zm00001d045861_P001 Maize mitochondrion 43.83 50.94
Zm00001d045792_P001 Maize extracellular 44.16 50.37
Zm00001d029906_P001 Maize extracellular 40.58 46.64
Zm00001d047093_P001 Maize extracellular 39.94 46.59
Zm00001d029903_P002 Maize extracellular 40.26 46.44
Zm00001d047089_P001 Maize extracellular 39.29 45.32
Zm00001d047090_P002 Maize extracellular 39.61 45.19
Zm00001d029907_P001 Maize extracellular 38.96 43.96
Zm00001d027281_P001 Maize extracellular 38.31 43.22
Zm00001d047091_P001 Maize extracellular 37.99 42.86
Zm00001d017736_P001 Maize cytosol 26.62 42.49
Zm00001d017735_P001 Maize extracellular 34.42 41.9
Zm00001d017740_P001 Maize extracellular 34.42 41.9
Zm00001d047094_P001 Maize extracellular 37.66 41.58
Zm00001d047135_P011 Maize extracellular 36.04 41.26
Zm00001d017737_P001 Maize extracellular 35.71 40.74
Zm00001d029913_P001 Maize extracellular 36.36 40.58
Zm00001d047147_P001 Maize extracellular 35.39 40.52
Zm00001d047142_P001 Maize extracellular 35.39 40.52
Zm00001d047146_P001 Maize extracellular 35.39 40.52
Zm00001d029899_P001 Maize extracellular, mitochondrion 37.01 40.43
Zm00001d017732_P001 Maize extracellular 35.39 40.37
Zm00001d017377_P001 Maize extracellular 35.06 40.3
Zm00001d040608_P001 Maize extracellular 35.06 40.3
Zm00001d017741_P001 Maize extracellular 20.78 40.25
Zm00001d017733_P001 Maize extracellular 35.06 40.0
Zm00001d047087_P001 Maize extracellular 37.01 39.86
Zm00001d040609_P001 Maize extracellular 34.74 39.78
Zm00001d048384_P001 Maize extracellular 34.74 39.78
Zm00001d047096_P001 Maize extracellular 35.06 38.3
Zm00001d017731_P001 Maize extracellular 28.9 38.2
Zm00001d029827_P001 Maize extracellular 28.25 37.83
Zm00001d004586_P001 Maize extracellular 37.34 36.74
Zm00001d027283_P001 Maize extracellular 37.01 35.85
Zm00001d002860_P002 Maize extracellular 34.74 35.08
Zm00001d029783_P003 Maize extracellular 23.05 25.82
Zm00001d006360_P001 Maize extracellular 22.08 25.0
Zm00001d048344_P002 Maize extracellular 22.08 24.82
Zm00001d027520_P001 Maize extracellular 22.08 24.46
Zm00001d017734_P001 Maize cytosol 35.06 23.58
Zm00001d033231_P003 Maize extracellular 45.78 19.75
Zm00001d014826_P001 Maize endoplasmic reticulum, extracellular, vacuole 19.81 19.12
Protein Annotations
Gene3D:2.40.40.10Gene3D:2.60.40.760MapMan:35.1EntrezGene:541909EMBL:AF332177EMBL:BT041021
EMBL:EU964316InterPro:Expan_Lol_pIInterPro:Expansin/allergen_DPBB_domInterPro:Expansin_CBDInterPro:Expansin_CBD_sfGO:GO:0000003
GO:GO:0005575GO:GO:0005576GO:GO:0008150GO:GO:0019953InterPro:IPR007112InterPro:IPR007117
InterPro:IPR036749InterPro:IPR036908InterPro:LolPIProteinID:ONM53191.1PFAM:PF01357PFAM:PF03330
PRINTS:PR00829PRINTS:PR01225PFscan:PS50842PFscan:PS50843PANTHER:PTHR31692PANTHER:PTHR31692:SF8
UniProt:Q94KT0InterPro:RlpA-like_DPBBInterPro:RlpA-like_sfSMART:SM00837SUPFAM:SSF49590SUPFAM:SSF50685
SignalP:SignalP-noTMTMHMM:TMhelixUniParc:UPI00000A8D96EnsemblPlantsGene:Zm00001d019560EnsemblPlants:Zm00001d019560_P001EnsemblPlants:Zm00001d019560_T001
SEG:seg:::::
Description
beta expansin4 beta expansin4
Coordinates
chr7:-:42572171..42573747
Molecular Weight (calculated)
32663.3 Da
IEP (calculated)
9.879
GRAVY (calculated)
-0.215
Length
308 amino acids
Sequence
(BLAST)
001: MAKLWTLLLA AVVVLSLLVS PIACTRKLNK PKPKPGSYRR PVKPKPKPVT GSYKPAPVAA RRNHTATPTP SPTVYGPGGW LSGAGATYYG ATNGDGSDGG
101: ACGYQTAVGK KPFDSMIAAG STPLYRGGEG CGACYEVKCT TNAACSGQPV TIVITDQSPG GLFPGEVEHF DMSGTAMGAM ARPGMADKLR AGGVLRILYR
201: RVPCKYTGVN IAFKVDQGAN PYYFDVLIEF EDDDGDLSAV DLMEAGSGVW TPMAHNWGAT WRLNNGRKLK APFGLRLTSD SRRVLVANNA IPAAWKPGKT
301: YRSLVNYP
Best Arabidopsis Sequence Match ( AT2G20750.1 )
(BLAST)
001: MQLFPVILPT LCVFLHLLIS GSGSTPPLTH SNQQVAATRW LPATATWYGS AEGDGSSGGA CGYGSLVDVK PFKARVGAVS PILFKGGEGC GACYKVRCLD
101: KTICSKRAVT IIATDQSPSG PSAKAKHTHF DLSGAAFGHM AIPGHNGVIR NRGLLNILYR RTACKYRGKN IAFHVNAGST DYWLSLLIEY EDGEGDIGSM
201: HIRQAGSKEW ISMKHIWGAN WCIVEGPLKG PFSVKLTTLS NNKTLSATDV IPSNWVPKAT YTSRLNFSPV L
Arabidopsis Description
EXPB1Expansin-B1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SKU2]
SUBAcon: [extracellular]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.