Factsheet for HORVU0Hr1G018320.1

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 8
endoplasmic reticulum 5
vacuole 5
plasma membrane 5
golgi 6
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	plastid, secretory
BaCelLo:	secretory
EpiLoc:	golgi
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6D01G231300.1	Wheat	extracellular	94.81	94.81
TraesCS6A01G249300.1	Wheat	extracellular	94.12	94.12
TraesCS6B01G275700.1	Wheat	extracellular	92.73	92.73
TraesCS3D01G482800.1	Wheat	extracellular	91.0	91.32
TraesCS3A01G488000.1	Wheat	extracellular	89.27	89.27
TraesCS3B01G535800.1	Wheat	extracellular	88.93	88.93
HORVU0Hr1G016410.1	Barley	extracellular	71.97	72.47
HORVU6Hr1G063180.1	Barley	extracellular	71.97	72.47
EER98447	Sorghum	extracellular	74.05	69.71
Os02t0658800-01	Rice	extracellular	68.86	68.15
EER98449	Sorghum	extracellular	72.32	66.99
Zm00001d019560_P001	Maize	plasma membrane	71.28	66.88
Zm00001d019557_P001	Maize	extracellular, plastid	57.79	57.79
HORVU0Hr1G016380.2	Barley	extracellular	50.52	55.09
HORVU2Hr1G013380.1	Barley	cytosol, extracellular, mitochondrion	44.98	54.85
HORVU2Hr1G097510.1	Barley	extracellular, mitochondrion, plastid	50.52	52.52
HORVU2Hr1G097480.1	Barley	extracellular	50.17	51.24
HORVU2Hr1G013360.1	Barley	extracellular	44.29	51.0
HORVU2Hr1G097490.1	Barley	plastid	52.25	48.55
HORVU6Hr1G055090.1	Barley	extracellular	40.83	44.03
HORVU2Hr1G013340.1	Barley	extracellular	44.29	43.84
HORVU3Hr1G073140.1	Barley	plastid	39.79	43.73
HORVU3Hr1G105170.1	Barley	plastid	39.79	43.73
HORVU3Hr1G001920.2	Barley	extracellular	42.21	43.42
HORVU3Hr1G076110.1	Barley	cytosol, extracellular	20.42	42.75
HORVU1Hr1G053300.1	Barley	extracellular	40.14	41.88
HORVU6Hr1G060410.7	Barley	extracellular	38.06	41.04
HORVU3Hr1G105180.1	Barley	extracellular	41.87	39.54
HORVU3Hr1G073120.1	Barley	extracellular	41.87	39.54
HORVU1Hr1G054210.1	Barley	extracellular	37.02	39.48
HORVU1Hr1G054240.2	Barley	plastid	43.25	39.43
HORVU6Hr1G005760.1	Barley	extracellular	38.75	39.3
HORVU6Hr1G005810.3	Barley	extracellular	41.18	39.27
HORVU4Hr1G086830.1	Barley	extracellular	35.29	38.35
HORVU4Hr1G086930.1	Barley	extracellular	35.29	37.23
HORVU0Hr1G005490.1	Barley	extracellular	36.33	36.71
HORVU5Hr1G019100.1	Barley	extracellular, plasma membrane	44.64	36.54
HORVU3Hr1G105520.1	Barley	extracellular	42.56	35.65
HORVU4Hr1G087070.2	Barley	extracellular, mitochondrion, peroxisome	34.6	35.59
HORVU5Hr1G092910.9	Barley	plastid	46.02	32.13
HORVU4Hr1G088140.3	Barley	extracellular	32.53	29.19
HORVU4Hr1G088080.4	Barley	plastid	39.45	28.29
HORVU1Hr1G052290.4	Barley	extracellular	24.91	25.99
HORVU4Hr1G081990.2	Barley	extracellular	24.91	25.71
HORVU4Hr1G081800.6	Barley	extracellular, golgi, plastid	26.3	25.42
HORVU7Hr1G119200.1	Barley	golgi, plastid, vacuole	23.18	21.2
HORVU7Hr1G119220.1	Barley	extracellular, golgi, plastid	22.84	21.09
HORVU7Hr1G119340.3	Barley	extracellular, golgi, plastid	22.49	21.04

Protein Annotations

Gene3D:2.40.40.10	Gene3D:2.60.40.760	MapMan:35.1	EMBL:AK370010	InterPro:Expan_Lol_pI	InterPro:Expansin/allergen_DPBB_dom
InterPro:Expansin_CBD	InterPro:Expansin_CBD_sf	UniProt:F2E1I9	GO:GO:0000003	GO:GO:0005575	GO:GO:0005576
GO:GO:0008150	GO:GO:0019953	EnsemblPlantsGene:HORVU0Hr1G018320	EnsemblPlants:HORVU0Hr1G018320.1	InterPro:IPR007112	InterPro:IPR007117
InterPro:IPR036749	InterPro:IPR036908	InterPro:LolPI	PFAM:PF01357	PFAM:PF03330	PRINTS:PR00829
PRINTS:PR01225	PFscan:PS50842	PFscan:PS50843	PANTHER:PTHR31692	PANTHER:PTHR31692:SF50	InterPro:RlpA-like_DPBB
InterPro:RlpA-like_sf	SMART:SM00837	SUPFAM:SSF49590	SUPFAM:SSF50685	SignalP:SignalP-noTM	TMHMM:TMhelix
UniParc:UPI00020076A9	SEG:seg	:	:	:	:

Description

Predicted protein [Source:UniProtKB/TrEMBL;Acc:F2E1I9]

Coordinates

chrchrUn:-:95324637..95326315

Molecular Weight (calculated)

30335.4 Da

IEP (calculated)

9.604

GRAVY (calculated)

-0.142

Length

289 amino acids

Sequence
(BLAST)

001: MANACTLALL GALLVLSLLV SPIACSRKLA KAVGQHKPAA VKGHKNQTAT NPSSSAAYGS GWLPAGATYY GNPNGDGGEG GACGYQTAVG HRPFSSMIAA
101: GSSPLFMKGK GCGACYDVKC SSNSACSGKP VTVVITDLSP GNLYPGEPCH FDMSGTALGA MAKPGMADKL RAGGVIRMQY KRVPCKYPGV NIAFRVDQGS
201: NPFYFKTLIE FEDDDGDLKA VALKEAGSGA WTQMTQDWGA LWRLNNGNRL RAPFSLRLTS DSGRKLVVNN VIPANWKAGA TYRSLVNYP

Best Arabidopsis Sequence Match ( AT1G65680.1 )
(BLAST)

001: MTILVVDRYY MLMNLLFALT CLLLNLTHCF SPKKFNISAA TTSDSDWSIA GSTWYGNPTG YGSDGGACGY GNAVAQPPFS KMVSAGGPSL FKSGKGCGAC
101: YQVKCTSKSA CSKNPVTVVI TDECPGCVKE SVHFDLSGTA FGAMAISGQD SQLRNVGELQ ILYKKVECNY IGKTVTFQVD KGSNANSFAV LVAYVNGDGE
201: IGRIELKQAL DSDKWLSMSQ SWGAVWKLDV SSPLRAPLSL RVTSLESGKT VVASNVIPAN WQPGAIYKSN VNF

Arabidopsis Description

EXPB2Putative expansin-B2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SHY6]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.