Factsheet for HORVU0Hr1G016380.2

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 9
endoplasmic reticulum 5
vacuole 5
plasma membrane 5
golgi 5
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	plastid, secretory
BaCelLo:	secretory
EpiLoc:	extracellular
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6A01G249700.1	Wheat	extracellular	92.83	92.48
TraesCS6D01G231400.1	Wheat	extracellular	91.7	91.35
TraesCS6A01G249400.2	Wheat	extracellular	90.57	90.57
Zm00001d051368_P001	Maize	extracellular	45.66	76.58
Zm00001d017493_P001	Maize	extracellular	76.23	75.66
EES07509	Sorghum	extracellular	75.09	75.38
KXG19818	Sorghum	extracellular	70.57	72.2
EER88254	Sorghum	extracellular	70.57	72.2
Zm00001d045861_P001	Maize	mitochondrion	69.81	69.81
Zm00001d045792_P001	Maize	extracellular	69.81	68.52
HORVU2Hr1G013380.1	Barley	cytosol, extracellular, mitochondrion	58.11	64.98
HORVU2Hr1G097480.1	Barley	extracellular	69.06	64.66
HORVU2Hr1G013360.1	Barley	extracellular	61.13	64.54
GSMUA_AchrUn_...	Banana	extracellular	59.25	59.47
PGSC0003DMT400048506	Potato	plastid	42.26	57.73
VIT_15s0021g02670.t01	Wine grape	extracellular	59.25	57.51
VIT_15s0021g02700.t01	Wine grape	extracellular	58.49	56.78
Solyc01g090810.2.1	Tomato	extracellular	57.74	55.64
HORVU6Hr1G063180.1	Barley	extracellular	59.62	55.05
HORVU0Hr1G016410.1	Barley	extracellular	59.62	55.05
CDY18950	Canola	cytosol, extracellular, plastid	49.06	54.85
GSMUA_Achr4P26910_001	Banana	extracellular	56.23	54.78
HORVU2Hr1G097510.1	Barley	extracellular, mitochondrion, plastid	56.98	54.32
CDY72345	Canola	cytosol	49.81	54.1
KRH33426	Soybean	extracellular	55.47	54.04
KRG88934	Soybean	extracellular, vacuole	55.47	53.07
AT2G45110.1	Thale cress	extracellular	51.7	52.9
CDY18948	Canola	extracellular	38.87	52.82
KRH75302	Soybean	extracellular	55.09	52.71
CDX83404	Canola	extracellular	51.32	52.51
Bra000370.1-P	Field mustard	extracellular	51.32	52.51
CDX74711	Canola	extracellular	51.7	52.49
HORVU2Hr1G013340.1	Barley	extracellular	57.74	52.4
CDY18951	Canola	extracellular	53.96	52.0
VIT_09s0002g08510.t01	Wine grape	extracellular	54.72	51.97
CDY72505	Canola	cytosol	31.32	51.88
CDY70406	Canola	extracellular	53.58	51.82
CDX74710	Canola	extracellular	53.58	51.82
Bra004889.1-P	Field mustard	extracellular	53.58	51.64
CDY18946	Canola	extracellular	51.32	51.13
AT1G65681.1	Thale cress	cytosol	43.02	51.12
KRH65410	Soybean	extracellular	51.32	50.94
AT1G65680.1	Thale cress	extracellular	52.45	50.92
KRH33423	Soybean	extracellular	53.21	50.9
CDY72655	Canola	cytosol, plastid	32.45	50.89
HORVU0Hr1G018320.1	Barley	extracellular	55.09	50.52
CDX96901	Canola	extracellular	49.06	49.06
HORVU2Hr1G097490.1	Barley	plastid	57.36	48.87
Bra035987.1-P	Field mustard	extracellular	48.68	48.68
CDY14888	Canola	extracellular	48.68	48.68
Solyc03g093390.2.1	Tomato	extracellular, nucleus	51.7	48.07
Solyc10g018500.1.1	Tomato	extracellular	47.17	47.17
Solyc01g090820.1.1	Tomato	extracellular	45.66	47.08
PGSC0003DMT400030395	Potato	cytosol, extracellular, mitochondrion, nucleus	23.02	46.92
HORVU1Hr1G054210.1	Barley	extracellular	46.79	45.76
CDX95627	Canola	extracellular	47.92	45.52
HORVU6Hr1G055090.1	Barley	extracellular	45.28	44.78
HORVU3Hr1G076110.1	Barley	cytosol, extracellular	23.02	44.2
Bra004891.1-P	Field mustard	cytosol, nucleus, plastid	23.02	44.2
HORVU3Hr1G001920.2	Barley	extracellular	46.79	44.13
HORVU3Hr1G073140.1	Barley	plastid	43.77	44.11
HORVU3Hr1G105170.1	Barley	plastid	43.77	44.11
Solyc05g052330.1.1	Tomato	extracellular	44.53	44.03
Solyc07g049540.1.1	Tomato	extracellular	42.64	43.97
AT3G60570.1	Thale cress	extracellular	43.77	43.94
Bra004890.1-P	Field mustard	extracellular	52.08	43.4
PGSC0003DMT400095086	Potato	plastid	40.38	42.8
CDX67835	Canola	extracellular	42.26	42.11
Bra003421.1-P	Field mustard	extracellular	42.26	42.11
CDY71186	Canola	extracellular	43.02	42.07
HORVU1Hr1G054240.2	Barley	plastid	50.19	41.96
HORVU6Hr1G005760.1	Barley	extracellular	44.91	41.75
HORVU6Hr1G005810.3	Barley	extracellular	47.55	41.58
HORVU1Hr1G053300.1	Barley	extracellular	43.02	41.16
HORVU4Hr1G086830.1	Barley	extracellular	41.13	40.98
HORVU6Hr1G060410.7	Barley	extracellular	41.13	40.67
CDX74713	Canola	extracellular	52.08	40.23
HORVU3Hr1G105180.1	Barley	extracellular	46.42	40.2
HORVU3Hr1G073120.1	Barley	extracellular	46.42	40.2
HORVU5Hr1G092910.9	Barley	plastid	62.26	39.86
HORVU4Hr1G086930.1	Barley	extracellular	40.38	39.05
HORVU4Hr1G087070.2	Barley	extracellular, mitochondrion, peroxisome	40.38	38.08
HORVU0Hr1G005490.1	Barley	extracellular	40.0	37.06
HORVU3Hr1G105520.1	Barley	extracellular	46.79	35.94
HORVU5Hr1G019100.1	Barley	extracellular, plasma membrane	47.17	35.41
CDY48362	Canola	extracellular	46.04	34.17
Bra014484.1-P	Field mustard	extracellular	46.04	33.89
HORVU4Hr1G088080.4	Barley	plastid	46.79	30.77
PGSC0003DMT400066943	Potato	cytosol, plastid, vacuole	50.57	29.19
HORVU4Hr1G088140.3	Barley	extracellular	34.34	28.26
HORVU4Hr1G081990.2	Barley	extracellular	27.92	26.43
HORVU4Hr1G081800.6	Barley	extracellular, golgi, plastid	29.06	25.75
HORVU1Hr1G052290.4	Barley	extracellular	24.91	23.83
HORVU7Hr1G119220.1	Barley	extracellular, golgi, plastid	24.53	20.77
HORVU7Hr1G119340.3	Barley	extracellular, golgi, plastid	24.15	20.71
HORVU7Hr1G119200.1	Barley	golgi, plastid, vacuole	24.53	20.57

Protein Annotations

Gene3D:2.40.40.10	Gene3D:2.60.40.760	MapMan:35.1	InterPro:Expan_Lol_pI	InterPro:Expansin/allergen_DPBB_dom	InterPro:Expansin_CBD
InterPro:Expansin_CBD_sf	GO:GO:0000003	GO:GO:0005575	GO:GO:0005576	GO:GO:0008150	GO:GO:0019953
EnsemblPlantsGene:HORVU0Hr1G016380	EnsemblPlants:HORVU0Hr1G016380.2	InterPro:IPR007112	InterPro:IPR007117	InterPro:IPR036749	InterPro:IPR036908
InterPro:LolPI	UniProt:M0YQS0	PFAM:PF01357	PFAM:PF03330	PRINTS:PR00829	PRINTS:PR01225
PFscan:PS50842	PFscan:PS50843	PANTHER:PTHR31692	PANTHER:PTHR31692:SF52	InterPro:RlpA-like_DPBB	InterPro:RlpA-like_sf
SMART:SM00837	SUPFAM:SSF49590	SUPFAM:SSF50685	SignalP:SignalP-noTM	UniParc:UPI0002953331	SEG:seg

Description

No Description!

Coordinates

chrchrUn:-:87951221..87952996

Molecular Weight (calculated)

27823.8 Da

IEP (calculated)

6.643

GRAVY (calculated)

-0.113

Length

265 amino acids

Sequence
(BLAST)

001: MAFSVARISA SIAVLMALAF LLRPCAAVEI HRKLSGWSNG GATWYGGPNG AGSDGGACGY QDAVDQQPFS SMIAAGGPSI YQDGKGCGSC YQVKCTGHGS
101: CSSSPVTVVL TDECPDGPCL DEPVHFDLSG TAFGGMAKPG QADQLRAAGR LQIQYTRVPC NWRGMHVAFK VDAGSNPYYL AVLIEYEDGD GDLSSVELME
201: NGGNGAGWTK MDRSWGAVWR YNSGPMLHAP FSVRLTSSSG KTLVASNVIP AGWKPGGTYR SVVNY

Best Arabidopsis Sequence Match ( AT2G45110.1 )
(BLAST)

001: MASSQRYFAL LALFAVSLKF CYCQNETIDV AGSGTAGVTW YGEPFGAGST GGACGYGSAV ANPPLYAMVS AGGPSLFNNG KGCGTCYQVV CIGHPACSGS
101: PITVTITDEC PGGPCASEPV HIDLSGKAMG ALAKPGQADQ LRSAGVIRVN YKRAACLYRG TNIVFRMDAG ANPYYISFVV EYENGDGDLS NVEIQPAGGS
201: FISMQEMRSA VWKVNSGSAL RGPFNIRLTS GESHKVIVAY NVIPANWKPD ESYRSIVNF

Arabidopsis Description

EXPB4Expansin-B4 [Source:UniProtKB/Swiss-Prot;Acc:Q9SHD1]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.