Factsheet for HORVU4Hr1G088080.4

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 3
extracellular 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	extracellular, mitochondrion, plastid
iPSORT:	plastid
MultiLoc:	extracellular
Predotar:	mitochondrion
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5A01G537300.1	Wheat	cytosol, extracellular, plastid	39.7	99.38
TraesCS4D01G361700.1	Wheat	extracellular	73.95	94.3
TraesCS4B01G375600.1	Wheat	extracellular	78.41	92.67
HORVU3Hr1G001920.2	Barley	extracellular	55.83	80.07
HORVU6Hr1G055090.1	Barley	extracellular	52.85	79.48
HORVU3Hr1G105170.1	Barley	plastid	49.63	76.05
HORVU3Hr1G073140.1	Barley	plastid	49.63	76.05
Os03t0102700-01	Rice	plastid	52.61	75.99
KXG40416	Sorghum	extracellular, vacuole	56.58	71.25
HORVU3Hr1G105180.1	Barley	extracellular	53.6	70.59
HORVU3Hr1G073120.1	Barley	extracellular	53.6	70.59
Zm00001d027283_P001	Maize	extracellular	53.6	67.92
HORVU3Hr1G076110.1	Barley	cytosol, extracellular	22.08	64.49
HORVU3Hr1G105520.1	Barley	extracellular	52.61	61.45
HORVU5Hr1G019100.1	Barley	extracellular, plasma membrane	52.85	60.34
HORVU6Hr1G005760.1	Barley	extracellular	41.94	59.3
HORVU6Hr1G005810.3	Barley	extracellular	43.67	58.09
HORVU1Hr1G054210.1	Barley	extracellular	38.96	57.93
HORVU1Hr1G054240.2	Barley	plastid	43.67	55.52
HORVU2Hr1G013380.1	Barley	cytosol, extracellular, mitochondrion	29.78	50.63
HORVU1Hr1G053300.1	Barley	extracellular	33.99	49.46
HORVU2Hr1G013360.1	Barley	extracellular	30.52	49.0
HORVU0Hr1G005490.1	Barley	extracellular	33.99	47.9
HORVU4Hr1G086830.1	Barley	extracellular	31.51	47.74
HORVU0Hr1G016380.2	Barley	extracellular	30.77	46.79
GSMUA_AchrUn_...	Banana	extracellular	10.67	46.74
HORVU4Hr1G086930.1	Barley	extracellular	31.02	45.62
HORVU4Hr1G087070.2	Barley	extracellular, mitochondrion, peroxisome	31.51	45.2
HORVU2Hr1G097480.1	Barley	extracellular	31.51	44.88
HORVU2Hr1G097510.1	Barley	extracellular, mitochondrion, plastid	30.27	43.88
HORVU6Hr1G063180.1	Barley	extracellular	28.29	39.72
HORVU0Hr1G016410.1	Barley	extracellular	28.29	39.72
HORVU0Hr1G018320.1	Barley	extracellular	28.29	39.45
HORVU4Hr1G088140.3	Barley	extracellular	31.27	39.13
HORVU2Hr1G013340.1	Barley	extracellular	28.04	38.7
HORVU6Hr1G060410.7	Barley	extracellular	24.81	37.31
HORVU2Hr1G097490.1	Barley	plastid	28.29	36.66
HORVU5Hr1G092910.9	Barley	plastid	30.27	29.47
HORVU4Hr1G081990.2	Barley	extracellular	17.62	25.36
HORVU1Hr1G052290.4	Barley	extracellular	16.13	23.47
HORVU4Hr1G081800.6	Barley	extracellular, golgi, plastid	17.37	23.41
HORVU7Hr1G119340.3	Barley	extracellular, golgi, plastid	15.63	20.39
HORVU7Hr1G119200.1	Barley	golgi, plastid, vacuole	15.63	19.94
HORVU7Hr1G119220.1	Barley	extracellular, golgi, plastid	15.14	19.49

Protein Annotations

Gene3D:2.40.40.10	Gene3D:2.60.40.760	MapMan:35.1	UniProt:A0A287Q1X3	InterPro:Expan_Lol_pI	InterPro:Expansin/allergen_DPBB_dom
InterPro:Expansin_CBD	InterPro:Expansin_CBD_sf	GO:GO:0000003	GO:GO:0005575	GO:GO:0005576	GO:GO:0008150
GO:GO:0019953	EnsemblPlantsGene:HORVU4Hr1G088080	EnsemblPlants:HORVU4Hr1G088080.4	InterPro:IPR007112	InterPro:IPR007117	InterPro:IPR036749
InterPro:IPR036908	InterPro:LolPI	PFAM:PF01357	PFAM:PF03330	PRINTS:PR00829	PRINTS:PR01225
PFscan:PS50842	PFscan:PS50843	PANTHER:PTHR31692	PANTHER:PTHR31692:SF23	InterPro:RlpA-like_DPBB	InterPro:RlpA-like_sf
SMART:SM00837	SUPFAM:SSF49590	SUPFAM:SSF50685	UniParc:UPI000B4783D9	SEG:seg	:

Description

No Description!

Coordinates

chrchr4H:-:639392933..639395123

Molecular Weight (calculated)

42783.0 Da

IEP (calculated)

6.497

GRAVY (calculated)

-0.396

Length

403 amino acids

Sequence
(BLAST)

001: MPFRSPTFCY RPAINTATAQ RRPAEQSRAA DSIIWYWSDL LAMAPSSSSF AVAAALLLCI LAAHGHGCCA KRSSAKKSHS HHGAPPPAPS PPATRPPSYG
101: YGSPPPPAAS TPPPAPSPPA TRPPSYGYGS PPPPAASTPP YGYGAPPPAA NSSSNSTNVD AGGWLDARAT WYGAPNGAGP DDNGGACGFK NVNLPPFSAM
201: TSCGNEPLFK DGKGCGSCYQ IRCVSAGHPA CSGVPETVII TDMNYYPVSR FHFDLSGTAF GAMAKDGRNE ELRHAGIIDM QFRRVPCQYP GLTVTFHVQH
301: GSNPYYLAIL VEYENGDGDV DQVDMMQSRP DAAAGEGGMA PTGEWVPMTE SWGSIWRMDT RRPMQGPFSL RITNESGKTL VADQVIPADW EPNEIYSSII
401: QFD

Best Arabidopsis Sequence Match ( AT1G65680.1 )
(BLAST)

001: MTILVVDRYY MLMNLLFALT CLLLNLTHCF SPKKFNISAA TTSDSDWSIA GSTWYGNPTG YGSDGGACGY GNAVAQPPFS KMVSAGGPSL FKSGKGCGAC
101: YQVKCTSKSA CSKNPVTVVI TDECPGCVKE SVHFDLSGTA FGAMAISGQD SQLRNVGELQ ILYKKVECNY IGKTVTFQVD KGSNANSFAV LVAYVNGDGE
201: IGRIELKQAL DSDKWLSMSQ SWGAVWKLDV SSPLRAPLSL RVTSLESGKT VVASNVIPAN WQPGAIYKSN VNF

Arabidopsis Description

EXPB2Putative expansin-B2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SHY6]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.