Factsheet for HORVU3Hr1G073120.1

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 9
endoplasmic reticulum 5
vacuole 5
plasma membrane 5
golgi 5
plastid 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	cytosol, plastid, secretory
BaCelLo:	secretory
ChloroP:	plastid
EpiLoc:	cytosol
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU3Hr1G105180.1	Barley	extracellular	100.0	100.0
HORVU3Hr1G105170.1	Barley	plastid	76.8	89.35
HORVU3Hr1G073140.1	Barley	plastid	76.8	89.35
TraesCS3A01G479900.1	Wheat	extracellular	89.54	85.89
HORVU6Hr1G055090.1	Barley	extracellular	72.88	83.21
HORVU3Hr1G105520.1	Barley	extracellular	86.27	76.52
Os03t0102700-01	Rice	plastid	68.3	74.91
HORVU3Hr1G001920.2	Barley	extracellular	64.71	70.46
KXG40416	Sorghum	extracellular, vacuole	73.53	70.31
Zm00001d027283_P001	Maize	extracellular	70.26	67.61
HORVU3Hr1G076110.1	Barley	cytosol, extracellular	28.76	63.77
HORVU5Hr1G019100.1	Barley	extracellular, plasma membrane	70.92	61.47
HORVU6Hr1G005760.1	Barley	extracellular	54.58	58.6
HORVU6Hr1G005810.3	Barley	extracellular	56.21	56.77
HORVU1Hr1G054210.1	Barley	extracellular	49.35	55.72
HORVU1Hr1G054240.2	Barley	plastid	55.56	53.63
HORVU4Hr1G088080.4	Barley	plastid	70.59	53.6
HORVU2Hr1G013380.1	Barley	cytosol, extracellular, mitochondrion	39.54	51.05
HORVU0Hr1G005490.1	Barley	extracellular	47.39	50.7
HORVU1Hr1G053300.1	Barley	extracellular	45.75	50.54
HORVU4Hr1G086830.1	Barley	extracellular	43.14	49.62
HORVU2Hr1G013360.1	Barley	extracellular	40.52	49.4
GSMUA_AchrUn_...	Banana	extracellular	14.38	47.83
HORVU4Hr1G086930.1	Barley	extracellular	42.16	47.08
HORVU4Hr1G087070.2	Barley	extracellular, mitochondrion, peroxisome	42.81	46.62
HORVU0Hr1G016380.2	Barley	extracellular	40.2	46.42
HORVU2Hr1G097510.1	Barley	extracellular, mitochondrion, plastid	40.52	44.6
HORVU2Hr1G097480.1	Barley	extracellular	41.18	44.52
HORVU0Hr1G016410.1	Barley	extracellular	39.87	42.51
HORVU6Hr1G063180.1	Barley	extracellular	39.87	42.51
HORVU0Hr1G018320.1	Barley	extracellular	39.54	41.87
HORVU4Hr1G088140.3	Barley	extracellular	41.83	39.75
HORVU2Hr1G013340.1	Barley	extracellular	36.93	38.7
HORVU6Hr1G060410.7	Barley	extracellular	32.68	37.31
HORVU2Hr1G097490.1	Barley	plastid	37.58	36.98
HORVU5Hr1G092910.9	Barley	plastid	39.87	29.47
HORVU4Hr1G081990.2	Barley	extracellular	25.49	27.86
HORVU1Hr1G052290.4	Barley	extracellular	23.86	26.35
HORVU4Hr1G081800.6	Barley	extracellular, golgi, plastid	24.18	24.75
HORVU7Hr1G119200.1	Barley	golgi, plastid, vacuole	22.22	21.52
HORVU7Hr1G119220.1	Barley	extracellular, golgi, plastid	21.57	21.09
HORVU7Hr1G119340.3	Barley	extracellular, golgi, plastid	21.24	21.04

Protein Annotations

Gene3D:2.40.40.10	Gene3D:2.60.40.760	MapMan:35.1	InterPro:Expan_Lol_pI	InterPro:Expansin/allergen_DPBB_dom	InterPro:Expansin_CBD
InterPro:Expansin_CBD_sf	GO:GO:0000003	GO:GO:0005575	GO:GO:0005576	GO:GO:0008150	GO:GO:0019953
EnsemblPlantsGene:HORVU3Hr1G073120	EnsemblPlants:HORVU3Hr1G073120.1	InterPro:IPR007112	InterPro:IPR007117	InterPro:IPR036749	InterPro:IPR036908
InterPro:LolPI	UniProt:M0YZK5	PFAM:PF01357	PFAM:PF03330	PRINTS:PR00829	PRINTS:PR01225
PFscan:PS50842	PFscan:PS50843	PANTHER:PTHR31692	PANTHER:PTHR31692:SF23	InterPro:RlpA-like_DPBB	InterPro:RlpA-like_sf
SMART:SM00837	SUPFAM:SSF49590	SUPFAM:SSF50685	SignalP:SignalP-noTM	TMHMM:TMhelix	UniParc:UPI000295143B
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chrchr3H:-:552516379..552517392

Molecular Weight (calculated)

32416.1 Da

IEP (calculated)

4.661

GRAVY (calculated)

-0.214

Length

306 amino acids

Sequence
(BLAST)

001: MAAAFSSYSV AAAFLCLLAA NGCCGCPWFL PATFCPGPTP DPIPTPDPAP ATPPPALATP SPGSGSGSAN GSMGGWLDAR ATWYGAPDGA GPLDNGGACG
101: FKNVNLPPFN AMTSCGNEPI FKDGKGCGSC YQIRCVGKVH PACSGDPETV IITDMNYYPV ARYHFDLSGT AFGAMAKDGR NDELRHAGII DMQFKRVPCQ
201: YTGLSVTFHV EKGSNPNYLA ILVEYGNGDG DVAQVDLMDG GEPTVSWRPM RESWGSIWRL DTRRPLRGPF SLRVTNGSGR SLVADQVIPA DWQPDTVYSS
301: DVQFDE

Best Arabidopsis Sequence Match ( AT1G65680.1 )
(BLAST)

001: MTILVVDRYY MLMNLLFALT CLLLNLTHCF SPKKFNISAA TTSDSDWSIA GSTWYGNPTG YGSDGGACGY GNAVAQPPFS KMVSAGGPSL FKSGKGCGAC
101: YQVKCTSKSA CSKNPVTVVI TDECPGCVKE SVHFDLSGTA FGAMAISGQD SQLRNVGELQ ILYKKVECNY IGKTVTFQVD KGSNANSFAV LVAYVNGDGE
201: IGRIELKQAL DSDKWLSMSQ SWGAVWKLDV SSPLRAPLSL RVTSLESGKT VVASNVIPAN WQPGAIYKSN VNF

Arabidopsis Description

EXPB2Putative expansin-B2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SHY6]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.