Factsheet for HORVU6Hr1G060410.7

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 6
endoplasmic reticulum 3
vacuole 3
plasma membrane 3
golgi 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6D01G218500.1	Wheat	extracellular	95.15	95.15
TraesCS6B01G264400.1	Wheat	extracellular	93.66	93.66
TraesCS6A01G235800.1	Wheat	extracellular	93.28	93.63
Os02t0639500-01	Rice	extracellular	81.34	83.52
Zm00001d017377_P001	Maize	extracellular	81.34	81.34
EES05488	Sorghum	extracellular	82.46	80.95
GSMUA_AchrUn_...	Banana	extracellular	70.9	72.24
GSMUA_Achr1P00120_001	Banana	extracellular	68.66	69.17
VIT_12s0059g00190.t01	Wine grape	extracellular	66.79	69.11
GSMUA_Achr5P12080_001	Banana	extracellular	68.28	68.54
KRH26935	Soybean	extracellular	63.81	65.52
Bra026272.1-P	Field mustard	extracellular	64.18	64.91
CDY18990	Canola	extracellular	63.81	64.53
CDY70556	Canola	extracellular	63.43	64.15
CDY58728	Canola	extracellular	63.43	64.15
Bra024215.1-P	Field mustard	extracellular	63.43	64.15
Solyc07g054170.2.1	Tomato	extracellular	63.81	64.04
AT4G28250.1	Thale cress	extracellular	63.06	64.02
PGSC0003DMT400047177	Potato	extracellular	63.06	63.3
Solyc10g008440.2.1	Tomato	extracellular	61.57	62.98
PGSC0003DMT400055827	Potato	extracellular	60.82	62.21
CDY05789	Canola	extracellular	61.19	61.89
Bra036499.1-P	Field mustard	extracellular	60.82	61.51
CDY31940	Canola	extracellular	60.82	61.51
AT2G20750.1	Thale cress	extracellular	61.19	60.52
KRH22402	Soybean	extracellular	58.21	60.47
KRH25552	Soybean	extracellular	59.7	59.93
KRH55988	Soybean	extracellular	59.33	59.55
HORVU2Hr1G013380.1	Barley	cytosol, extracellular, mitochondrion	39.55	44.73
HORVU2Hr1G013360.1	Barley	extracellular	41.42	44.22
HORVU0Hr1G016380.2	Barley	extracellular	40.67	41.13
HORVU2Hr1G097510.1	Barley	extracellular, mitochondrion, plastid	41.04	39.57
HORVU0Hr1G018320.1	Barley	extracellular	41.04	38.06
HORVU0Hr1G016410.1	Barley	extracellular	40.67	37.98
HORVU6Hr1G063180.1	Barley	extracellular	40.67	37.98
HORVU6Hr1G055090.1	Barley	extracellular	36.57	36.57
HORVU3Hr1G073140.1	Barley	plastid	35.45	36.12
HORVU3Hr1G105170.1	Barley	plastid	35.45	36.12
HORVU1Hr1G053300.1	Barley	extracellular	37.31	36.1
HORVU4Hr1G086830.1	Barley	extracellular	35.82	36.09
HORVU2Hr1G097480.1	Barley	extracellular	38.06	36.04
HORVU3Hr1G001920.2	Barley	extracellular	37.69	35.94
HORVU1Hr1G054210.1	Barley	extracellular	35.45	35.06
HORVU2Hr1G097490.1	Barley	plastid	39.55	34.08
HORVU4Hr1G086930.1	Barley	extracellular	34.7	33.94
HORVU2Hr1G013340.1	Barley	extracellular	36.94	33.9
HORVU4Hr1G087070.2	Barley	extracellular, mitochondrion, peroxisome	35.07	33.45
HORVU3Hr1G076110.1	Barley	cytosol, extracellular	17.16	33.33
HORVU3Hr1G105180.1	Barley	extracellular	37.31	32.68
HORVU3Hr1G073120.1	Barley	extracellular	37.31	32.68
HORVU6Hr1G005760.1	Barley	extracellular	34.7	32.63
HORVU6Hr1G005810.3	Barley	extracellular	36.19	32.01
HORVU0Hr1G005490.1	Barley	extracellular	33.96	31.82
HORVU1Hr1G054240.2	Barley	plastid	35.45	29.97
HORVU3Hr1G105520.1	Barley	extracellular	38.06	29.57
HORVU5Hr1G019100.1	Barley	extracellular, plasma membrane	37.31	28.33
HORVU1Hr1G052290.4	Barley	extracellular	28.36	27.44
HORVU7Hr1G119200.1	Barley	golgi, plastid, vacuole	30.97	26.27
HORVU7Hr1G119340.3	Barley	extracellular, golgi, plastid	29.48	25.57
HORVU7Hr1G119220.1	Barley	extracellular, golgi, plastid	29.85	25.56
HORVU4Hr1G081990.2	Barley	extracellular	26.49	25.36
HORVU4Hr1G088080.4	Barley	plastid	37.31	24.81
HORVU4Hr1G081800.6	Barley	extracellular, golgi, plastid	26.49	23.75
HORVU5Hr1G092910.9	Barley	plastid	36.57	23.67
HORVU4Hr1G088140.3	Barley	extracellular	27.61	22.98

Protein Annotations

Gene3D:2.40.40.10	Gene3D:2.60.40.760	MapMan:21.4.2.3	UniProt:A0A287UD27	InterPro:Expan_Lol_pI	InterPro:Expansin/allergen_DPBB_dom
InterPro:Expansin_CBD	InterPro:Expansin_CBD_sf	GO:GO:0000003	GO:GO:0005575	GO:GO:0005576	GO:GO:0008150
GO:GO:0019953	EnsemblPlantsGene:HORVU6Hr1G060410	EnsemblPlants:HORVU6Hr1G060410.7	InterPro:IPR007112	InterPro:IPR007117	InterPro:IPR036749
InterPro:IPR036908	InterPro:LolPI	PFAM:PF01357	PFAM:PF03330	PRINTS:PR00829	PRINTS:PR01225
PFscan:PS50842	PFscan:PS50843	PANTHER:PTHR31692	PANTHER:PTHR31692:SF5	InterPro:RlpA-like_DPBB	InterPro:RlpA-like_sf
SMART:SM00837	SUPFAM:SSF49590	SUPFAM:SSF50685	SignalP:SignalP-noTM	TMHMM:TMhelix	UniParc:UPI000B470368
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chrchr6H:-:401470863..401486068

Molecular Weight (calculated)

28444.0 Da

IEP (calculated)

8.642

GRAVY (calculated)

0.051

Length

268 amino acids

Sequence
(BLAST)

001: MAAGSATSSS CALLVSVLFA AFLFGVGETG AVHKVVDPEW HQATATWYGS AEGDGSAGGA CGYGTLVDVV PMKARVGAVS PVLFKAGEGC GACYKVRCLD
101: RGICSRRAVT VIVTDECPGG YCSLGRTHFD LSGAAFGRLA VAGHGGQLRN RGEISVVFRS RTPCKYRGKN IAFRVVEGST SFWLSLLVEF EDGDGDIGSM
201: QLKQAKSTDW QDMTHIWGAT WSLTPGPLVG PFSIRVTTLT TKKTLSAQDV IPRNWTPKAT YTSRLNFA

Best Arabidopsis Sequence Match ( AT4G28250.1 )
(BLAST)

001: MQLFPVMLAT LCIVLQLLIG SSALATTNRH VSNSHWLPAV ATWYGSPNGD GSDGGACGYG TLVDVKPLHA RVGAVNPILF KNGEGCGACY KVRCLDKSIC
101: SRRAVTVIIT DECPGCSKTS THFDLSGAVF GRLAIAGESG PLRNRGLIPV IYRRTACKYR GKNIAFHVNE GSTDFWLSLL VEFEDGEGDI GSMHIRQAGA
201: REWLEMKHVW GANWCIIGGP LKGPFSIKLT TLSAGKTLSA TDVVPRNWAP KATYSSRLNF SPVL

Arabidopsis Description

EXPB3EXPB3 [Source:UniProtKB/TrEMBL;Acc:A0A178USU9]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.