Factsheet for HORVU3Hr1G105520.1

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

plastid 1
extracellular 5
endoplasmic reticulum 3
vacuole 3
plasma membrane 4
golgi 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	plastid, secretory
ChloroP:	plastid
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3B01G526800.1	Wheat	extracellular	81.16	93.33
TraesCS3D01G476800.1	Wheat	extracellular	50.43	89.69
HORVU3Hr1G073120.1	Barley	extracellular	76.52	86.27
HORVU3Hr1G105180.1	Barley	extracellular	76.52	86.27
HORVU3Hr1G105170.1	Barley	plastid	65.51	85.93
HORVU3Hr1G073140.1	Barley	plastid	65.51	85.93
HORVU6Hr1G055090.1	Barley	extracellular	63.77	82.09
Os03t0102700-01	Rice	plastid	58.55	72.4
HORVU3Hr1G001920.2	Barley	extracellular	57.1	70.11
KXG40416	Sorghum	extracellular, vacuole	64.06	69.06
Zm00001d027283_P001	Maize	extracellular	60.87	66.04
HORVU3Hr1G076110.1	Barley	cytosol, extracellular	25.8	64.49
HORVU5Hr1G019100.1	Barley	extracellular, plasma membrane	62.61	61.19
HORVU6Hr1G005760.1	Barley	extracellular	48.7	58.95
HORVU6Hr1G005810.3	Barley	extracellular	50.43	57.43
HORVU1Hr1G054210.1	Barley	extracellular	44.64	56.83
HORVU1Hr1G054240.2	Barley	plastid	50.72	55.2
HORVU4Hr1G088080.4	Barley	plastid	61.45	52.61
HORVU1Hr1G053300.1	Barley	extracellular	41.45	51.62
HORVU0Hr1G005490.1	Barley	extracellular	42.03	50.7
HORVU2Hr1G013380.1	Barley	cytosol, extracellular, mitochondrion	34.78	50.63
HORVU4Hr1G086830.1	Barley	extracellular	38.84	50.38
HORVU2Hr1G013360.1	Barley	extracellular	35.36	48.61
HORVU4Hr1G086930.1	Barley	extracellular	37.68	47.45
HORVU4Hr1G087070.2	Barley	extracellular, mitochondrion, peroxisome	38.26	46.98
HORVU0Hr1G016380.2	Barley	extracellular	35.94	46.79
GSMUA_AchrUn_...	Banana	extracellular	12.46	46.74
HORVU2Hr1G097480.1	Barley	extracellular	37.1	45.23
HORVU6Hr1G063180.1	Barley	extracellular	35.65	42.86
HORVU0Hr1G016410.1	Barley	extracellular	35.65	42.86
HORVU2Hr1G097510.1	Barley	extracellular, mitochondrion, plastid	34.49	42.81
HORVU0Hr1G018320.1	Barley	extracellular	35.65	42.56
HORVU4Hr1G088140.3	Barley	extracellular	36.81	39.44
HORVU6Hr1G060410.7	Barley	extracellular	29.57	38.06
HORVU2Hr1G013340.1	Barley	extracellular	32.17	38.01
HORVU2Hr1G097490.1	Barley	plastid	32.75	36.33
HORVU5Hr1G092910.9	Barley	plastid	35.65	29.71
HORVU4Hr1G081990.2	Barley	extracellular	22.61	27.86
HORVU1Hr1G052290.4	Barley	extracellular	20.0	24.91
HORVU4Hr1G081800.6	Barley	extracellular, golgi, plastid	20.58	23.75
HORVU7Hr1G119200.1	Barley	golgi, plastid, vacuole	19.42	21.2
HORVU7Hr1G119340.3	Barley	extracellular, golgi, plastid	18.84	21.04
HORVU7Hr1G119220.1	Barley	extracellular, golgi, plastid	18.84	20.77

Protein Annotations

Gene3D:2.40.40.10	Gene3D:2.60.40.760	MapMan:35.1	UniProt:A0A287MJH2	InterPro:Expan_Lol_pI	InterPro:Expansin/allergen_DPBB_dom
InterPro:Expansin_CBD	InterPro:Expansin_CBD_sf	GO:GO:0005575	GO:GO:0005576	EnsemblPlantsGene:HORVU3Hr1G105520	EnsemblPlants:HORVU3Hr1G105520.1
InterPro:IPR007112	InterPro:IPR007117	InterPro:IPR036749	InterPro:IPR036908	PFAM:PF01357	PFAM:PF03330
PRINTS:PR01225	PFscan:PS50842	PFscan:PS50843	PANTHER:PTHR31692	PANTHER:PTHR31692:SF23	InterPro:RlpA-like_DPBB
InterPro:RlpA-like_sf	SUPFAM:SSF49590	SUPFAM:SSF50685	SignalP:SignalP-noTM	UniParc:UPI000B47D05B	SEG:seg

Description

No Description!

Coordinates

chrchr3H:-:668647198..668648892

Molecular Weight (calculated)

36288.0 Da

IEP (calculated)

5.556

GRAVY (calculated)

-0.087

Length

345 amino acids

Sequence
(BLAST)

001: MAATFSSYAL AVALLSLLAA NGCCGCPGLT PAPTPAPMPT PTPAPASPSP DPVTPPPAPA TPSPGSGSGS TNGSSDGWLD AKATWYGAPD GAGPLDNGGA
101: CGFKNVNLPP FNAMTSCGNE PIFKDGKGCG SCYQVSRHCS LIVFFTLTLR ACCSICPAPN IHALILDCCM QIRCVGKAHP ACSGVPETVI ITDMNYYPVA
201: RYHFDLSGTA FGAMAKEGRN DELRHAGIID MQFKRVPCEY PGLSVTFHVE KGSNPNYLAI LVEYGNGDGD VAQVDLMDDG EPTGPWVPMR HSWGSIWRLD
301: TRRTLQGPFS LRVTNGSGRS LVADQVIPAN WKPDAVYSSA VQFDD

Best Arabidopsis Sequence Match ( AT1G65680.1 )
(BLAST)

001: MTILVVDRYY MLMNLLFALT CLLLNLTHCF SPKKFNISAA TTSDSDWSIA GSTWYGNPTG YGSDGGACGY GNAVAQPPFS KMVSAGGPSL FKSGKGCGAC
101: YQVKCTSKSA CSKNPVTVVI TDECPGCVKE SVHFDLSGTA FGAMAISGQD SQLRNVGELQ ILYKKVECNY IGKTVTFQVD KGSNANSFAV LVAYVNGDGE
201: IGRIELKQAL DSDKWLSMSQ SWGAVWKLDV SSPLRAPLSL RVTSLESGKT VVASNVIPAN WQPGAIYKSN VNF

Arabidopsis Description

EXPB2Putative expansin-B2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SHY6]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.