Factsheet for TraesCS3D01G476800.1

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

plastid 2
extracellular 6
golgi 4
plasma membrane 4
endoplasmic reticulum 4
vacuole 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	plastid, secretory
ChloroP:	plastid
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3B01G526800.1	Wheat	extracellular	89.18	57.67
TraesCS3D01G474800.1	Wheat	extracellular	88.14	54.46
TraesCS3D01G476700.1	Wheat	extracellular	86.08	54.4
TraesCS3D01G000400.1	Wheat	cytosol	55.67	53.2
TraesCS6D01G198400.1	Wheat	extracellular	78.35	50.84
HORVU3Hr1G105520.1	Barley	extracellular	89.69	50.43
TraesCS3D01G000500.1	Wheat	extracellular	65.98	46.72
KXG40416	Sorghum	extracellular, vacuole	72.68	44.06
Os03t0102700-01	Rice	plastid	62.89	43.73
Zm00001d027283_P001	Maize	extracellular	70.62	43.08
TraesCS1D01G215400.1	Wheat	extracellular	58.25	42.8
TraesCS1D01G215300.1	Wheat	extracellular	59.28	41.97
TraesCS4D01G361700.1	Wheat	extracellular	67.53	41.46
TraesCS6D01G037600.1	Wheat	mitochondrion	24.23	40.52
TraesCS6D01G037500.1	Wheat	extracellular	55.15	39.19
TraesCS6D01G037700.1	Wheat	extracellular	55.15	39.19
TraesCS5D01G086000.1	Wheat	extracellular, plasma membrane	68.56	38.33
TraesCS4D01G361900.1	Wheat	extracellular	55.67	36.36
TraesCS1D01G211500.1	Wheat	extracellular	48.97	35.85
TraesCS2D01G459300.1	Wheat	extracellular	46.39	33.96
TraesCS1D01G215100.1	Wheat	plastid	49.48	33.92
TraesCS2D01G078900.1	Wheat	extracellular	43.81	33.46
TraesCS1D01G215500.1	Wheat	extracellular	53.09	32.7
TraesCS2D01G592900.1	Wheat	extracellular	41.24	32.13
TraesCS2D01G078800.1	Wheat	extracellular	41.75	31.89
TraesCS1D01G215200.1	Wheat	extracellular, mitochondrion, nucleus, plastid	51.55	31.85
TraesCS6D01G231400.1	Wheat	extracellular	42.78	31.2
TraesCS2D01G411000.1	Wheat	extracellular	41.75	30.92
TraesCS2D01G411200.1	Wheat	extracellular	41.24	30.65
GSMUA_AchrUn_...	Banana	extracellular	14.43	30.43
TraesCS4D01G355100.1	Wheat	extracellular	42.27	30.37
TraesCS4D01G355800.1	Wheat	extracellular	42.27	30.37
TraesCS2D01G104800.1	Wheat	extracellular	39.69	30.32
TraesCS3D01G482800.1	Wheat	extracellular	43.81	29.51
TraesCS4D01G355700.1	Wheat	extracellular	40.21	29.1
TraesCS6D01G231200.1	Wheat	extracellular	42.78	28.92
TraesCS2D01G078600.1	Wheat	extracellular	35.57	28.87
TraesCS6D01G231300.1	Wheat	extracellular	42.27	28.37
TraesCS5D01G384200.1	Wheat	extracellular	41.24	25.97
TraesCS2D01G411100.1	Wheat	extracellular, plastid	37.11	25.62
TraesCS6D01G218500.1	Wheat	extracellular	34.02	24.63
TraesCS2D01G369200.2	Wheat	extracellular	33.51	23.3
TraesCS4D01G323600.1	Wheat	extracellular	29.9	20.94
TraesCS4D01G323900.1	Wheat	golgi	28.35	20.3
TraesCS4D01G324000.1	Wheat	extracellular	27.32	19.41
TraesCS1D01G206700.1	Wheat	extracellular	27.32	18.73
TraesCS4D01G323800.2	Wheat	extracellular	25.26	16.23
TraesCS7D01G532500.1	Wheat	extracellular	25.26	15.26
TraesCS7D01G532400.1	Wheat	extracellular	22.16	13.96
TraesCS7D01G532200.1	Wheat	extracellular	22.16	13.92

Protein Annotations

Gene3D:2.40.40.10	Gene3D:2.60.40.760	MapMan:35.1	InterPro:Expansin/allergen_DPBB_dom	InterPro:Expansin_CBD	InterPro:Expansin_CBD_sf
GO:GO:0000003	GO:GO:0005575	GO:GO:0005576	GO:GO:0008150	GO:GO:0019953	InterPro:IPR007112
InterPro:IPR007117	InterPro:IPR036749	InterPro:IPR036908	InterPro:LolPI	PFAM:PF01357	PFAM:PF03330
PRINTS:PR00829	PFscan:PS50842	PFscan:PS50843	PANTHER:PTHR31692	PANTHER:PTHR31692:SF23	InterPro:RlpA-like_DPBB
InterPro:RlpA-like_sf	SUPFAM:SSF49590	SUPFAM:SSF50685	SignalP:SignalP-noTM	EnsemblPlantsGene:TraesCS3D01G476800	EnsemblPlants:TraesCS3D01G476800.1
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr3D:-:577262870..577264591

Molecular Weight (calculated)

20210.0 Da

IEP (calculated)

4.857

GRAVY (calculated)

0.012

Length

194 amino acids

Sequence
(BLAST)

001: MAATSSSSYA VAVALLCLLA ADGCCGCPGL APPPSPATPS PGPPGTALPM APGRTTMIRC VGKAHPACSG VPETVIITDM NYYPVARYHF DLSGTAFGAM
101: AKDGRNDELR HAGIIDMQFK RVPCEYTGLS VTFHVEKGSN PNYLAILVEY GNGDGDVAQV DLTNGSGRSL VADQVIPANW KPDAVYSSAV QFDD

Best Arabidopsis Sequence Match ( AT1G65680.1 )
(BLAST)

001: MTILVVDRYY MLMNLLFALT CLLLNLTHCF SPKKFNISAA TTSDSDWSIA GSTWYGNPTG YGSDGGACGY GNAVAQPPFS KMVSAGGPSL FKSGKGCGAC
101: YQVKCTSKSA CSKNPVTVVI TDECPGCVKE SVHFDLSGTA FGAMAISGQD SQLRNVGELQ ILYKKVECNY IGKTVTFQVD KGSNANSFAV LVAYVNGDGE
201: IGRIELKQAL DSDKWLSMSQ SWGAVWKLDV SSPLRAPLSL RVTSLESGKT VVASNVIPAN WQPGAIYKSN VNF

Arabidopsis Description

EXPB2Putative expansin-B2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SHY6]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.