Factsheet for TraesCS6D01G037700.1

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 6
endoplasmic reticulum 4
vacuole 4
plasma membrane 4
golgi 4
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	plastid, secretory
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6D01G037600.1	Wheat	mitochondrion	42.49	100.0
TraesCS6A01G032700.1	Wheat	extracellular	98.53	98.53
TraesCS6B01G046400.1	Wheat	extracellular	97.8	97.8
TraesCS6D01G037500.1	Wheat	extracellular	97.07	97.07
TraesCSU01G085500.1	Wheat	cytosol	69.6	96.94
HORVU3Hr1G076110.1	Barley	cytosol, extracellular	44.69	88.41
TraesCS1D01G215200.1	Wheat	extracellular, mitochondrion, nucleus, plastid	83.88	72.93
TraesCS1D01G215300.1	Wheat	extracellular	70.33	70.07
TraesCS1D01G215400.1	Wheat	extracellular	63.0	65.15
TraesCS3D01G000400.1	Wheat	cytosol	47.99	64.53
TraesCS3D01G000500.1	Wheat	extracellular	62.64	62.41
TraesCS6D01G198400.1	Wheat	extracellular	63.74	58.19
TraesCS4D01G361700.1	Wheat	extracellular	64.84	56.01
TraesCS1D01G215100.1	Wheat	plastid	57.88	55.83
TraesCS3D01G476700.1	Wheat	extracellular	62.27	55.37
TraesCS3D01G476800.1	Wheat	extracellular	39.19	55.15
TraesCS3D01G474800.1	Wheat	extracellular	63.37	55.1
TraesCS1D01G211500.1	Wheat	extracellular	50.55	52.08
TraesCS4D01G361900.1	Wheat	extracellular	56.41	51.85
TraesCS2D01G459300.1	Wheat	extracellular	48.72	50.19
TraesCS2D01G411000.1	Wheat	extracellular	47.99	50.0
TraesCS2D01G078900.1	Wheat	extracellular	45.79	49.21
TraesCS1D01G215500.1	Wheat	extracellular	56.78	49.21
TraesCS2D01G592900.1	Wheat	extracellular	43.96	48.19
TraesCS5D01G086000.1	Wheat	extracellular, plasma membrane	61.17	48.13
TraesCS2D01G411200.1	Wheat	extracellular	45.79	47.89
GSMUA_AchrUn_...	Banana	extracellular	16.12	47.83
TraesCS4D01G355100.1	Wheat	extracellular	46.52	47.04
TraesCS4D01G355800.1	Wheat	extracellular	46.52	47.04
TraesCS6D01G231400.1	Wheat	extracellular	45.79	46.99
TraesCS4D01G355700.1	Wheat	extracellular	45.05	45.9
TraesCS2D01G078800.1	Wheat	extracellular	42.12	45.28
TraesCS2D01G104800.1	Wheat	extracellular	41.39	44.49
TraesCS6D01G231200.1	Wheat	extracellular	45.79	43.55
TraesCS2D01G078600.1	Wheat	extracellular	38.1	43.51
TraesCS3D01G482800.1	Wheat	extracellular	45.42	43.06
TraesCS6D01G231300.1	Wheat	extracellular	45.05	42.56
TraesCS2D01G411100.1	Wheat	extracellular, plastid	41.39	40.21
TraesCS5D01G384200.1	Wheat	extracellular	45.05	39.94
TraesCS6D01G218500.1	Wheat	extracellular	35.9	36.57
TraesCS2D01G369200.2	Wheat	extracellular	33.33	32.62
TraesCS4D01G323600.1	Wheat	extracellular	26.74	26.35
TraesCS4D01G324000.1	Wheat	extracellular	24.91	24.91
TraesCS4D01G323900.1	Wheat	golgi	24.18	24.35
TraesCS1D01G206700.1	Wheat	extracellular	23.08	22.26
TraesCS4D01G323800.2	Wheat	extracellular	24.18	21.85
TraesCS7D01G532200.1	Wheat	extracellular	21.61	19.09
TraesCS7D01G532400.1	Wheat	extracellular	21.25	18.83
TraesCS7D01G532500.1	Wheat	extracellular	21.61	18.38

Protein Annotations

Gene3D:2.40.40.10	Gene3D:2.60.40.760	MapMan:35.1	InterPro:Expan_Lol_pI	InterPro:Expansin/allergen_DPBB_dom	InterPro:Expansin_CBD
InterPro:Expansin_CBD_sf	GO:GO:0000003	GO:GO:0005575	GO:GO:0005576	GO:GO:0008150	GO:GO:0019953
InterPro:IPR007112	InterPro:IPR007117	InterPro:IPR036749	InterPro:IPR036908	InterPro:LolPI	PFAM:PF01357
PFAM:PF03330	PRINTS:PR00829	PRINTS:PR01225	PFscan:PS50842	PFscan:PS50843	PANTHER:PTHR31692
PANTHER:PTHR31692:SF19	InterPro:RlpA-like_DPBB	InterPro:RlpA-like_sf	SMART:SM00837	SUPFAM:SSF49590	SUPFAM:SSF50685
SignalP:SignalP-noTM	TMHMM:TMhelix	EnsemblPlantsGene:TraesCS6D01G037700	EnsemblPlants:TraesCS6D01G037700.1	SEG:seg	:

Description

No Description!

Coordinates

chr6D:+:15639997..15641044

Molecular Weight (calculated)

29892.5 Da

IEP (calculated)

9.606

GRAVY (calculated)

-0.259

Length

273 amino acids

Sequence
(BLAST)

001: MAGASTNAIA LVLVALLSVL VTSVRSAANY DTSAARSYNS GWLPAKATWY GAPTGAGPND NGGACGFKNV NQYPFSSMTS CGNEPLFDAG AGCGSCYEIR
101: CVAANNPSCS GQPRRVVITD MNYYPVARYH FDLSGTAFGA MAKNGLNDKL RHAGIIDMQF RRVRCNFPGM KVTFHVQRGS NPNYLAVLVE YANVDGTVVR
201: MELMQTRNGR PTGSWEPMRR SWGSIWRMDT SRPLQGPFSM RITSDSGKTL VANNVIPAYW RPDKAYWSNV QFY

Best Arabidopsis Sequence Match ( AT1G65680.1 )
(BLAST)

001: MTILVVDRYY MLMNLLFALT CLLLNLTHCF SPKKFNISAA TTSDSDWSIA GSTWYGNPTG YGSDGGACGY GNAVAQPPFS KMVSAGGPSL FKSGKGCGAC
101: YQVKCTSKSA CSKNPVTVVI TDECPGCVKE SVHFDLSGTA FGAMAISGQD SQLRNVGELQ ILYKKVECNY IGKTVTFQVD KGSNANSFAV LVAYVNGDGE
201: IGRIELKQAL DSDKWLSMSQ SWGAVWKLDV SSPLRAPLSL RVTSLESGKT VVASNVIPAN WQPGAIYKSN VNF

Arabidopsis Description

EXPB2Putative expansin-B2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SHY6]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.