Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- extracellular 6
- endoplasmic reticulum 5
- vacuole 4
- plasma membrane 4
- golgi 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5A01G499100.1 | Wheat | extracellular | 74.83 | 90.4 |
| TraesCS4B01G327100.1 | Wheat | golgi | 80.79 | 90.04 |
| TraesCS4D01G323900.1 | Wheat | golgi | 76.49 | 85.24 |
| TraesCS4D01G324000.1 | Wheat | extracellular | 73.18 | 80.95 |
| TraesCS4D01G323600.1 | Wheat | extracellular | 68.54 | 74.73 |
| HORVU4Hr1G081800.6 | Barley | extracellular, golgi, plastid | 71.19 | 71.91 |
| EER95568 | Sorghum | extracellular | 62.91 | 70.37 |
| Zm00001d027520_P001 | Maize | extracellular | 61.92 | 67.27 |
| Zm00001d048344_P002 | Maize | extracellular | 60.93 | 67.15 |
| Os03t0132200-01 | Rice | extracellular, plastid | 61.92 | 67.03 |
| TraesCS1D01G206700.1 | Wheat | extracellular | 55.3 | 59.01 |
| GSMUA_Achr11P... | Banana | extracellular | 50.99 | 57.89 |
| GSMUA_Achr5P19030_001 | Banana | extracellular | 49.34 | 56.44 |
| GSMUA_Achr5P11590_001 | Banana | extracellular | 48.01 | 55.56 |
| Solyc01g112000.2.1 | Tomato | extracellular | 48.01 | 55.56 |
| PGSC0003DMT400047948 | Potato | extracellular | 47.68 | 55.38 |
| GSMUA_Achr11P... | Banana | extracellular | 48.01 | 54.72 |
| VIT_03s0038g03430.t01 | Wine grape | extracellular | 46.36 | 54.05 |
| GSMUA_AchrUn_... | Banana | extracellular | 33.44 | 53.72 |
| KRH29091 | Soybean | extracellular | 45.03 | 52.51 |
| KRH24119 | Soybean | extracellular | 44.37 | 51.34 |
| CDY69288 | Canola | extracellular | 44.37 | 50.76 |
| Bra033563.1-P | Field mustard | extracellular | 44.37 | 50.76 |
| AT3G45970.1 | Thale cress | extracellular | 44.37 | 50.57 |
| AT4G38400.1 | Thale cress | extracellular | 44.37 | 50.57 |
| CDY64278 | Canola | extracellular | 44.04 | 50.19 |
| CDY72634 | Canola | extracellular | 43.71 | 49.81 |
| Bra011899.1-P | Field mustard | extracellular | 44.04 | 49.44 |
| CDY61895 | Canola | extracellular | 44.04 | 49.44 |
| CDY52801 | Canola | extracellular | 43.71 | 49.07 |
| AT3G45960.2 | Thale cress | extracellular | 42.72 | 49.05 |
| GSMUA_Achr1P02170_001 | Banana | extracellular, peroxisome, plastid | 48.34 | 47.56 |
| TraesCS7D01G532200.1 | Wheat | extracellular | 38.41 | 37.54 |
| TraesCS7D01G532400.1 | Wheat | extracellular | 37.75 | 37.01 |
| TraesCS7D01G532500.1 | Wheat | extracellular | 37.09 | 34.89 |
| TraesCS2D01G592900.1 | Wheat | extracellular | 26.49 | 32.13 |
| TraesCS2D01G078800.1 | Wheat | extracellular | 26.16 | 31.1 |
| TraesCS2D01G411000.1 | Wheat | extracellular | 26.49 | 30.53 |
| TraesCS2D01G078900.1 | Wheat | extracellular | 24.83 | 29.53 |
| TraesCS2D01G411200.1 | Wheat | extracellular | 25.5 | 29.5 |
| TraesCS2D01G104800.1 | Wheat | extracellular | 24.5 | 29.13 |
| TraesCS6D01G231400.1 | Wheat | extracellular | 24.17 | 27.44 |
| TraesCS2D01G411100.1 | Wheat | extracellular, plastid | 25.5 | 27.4 |
| TraesCS1D01G215300.1 | Wheat | extracellular | 24.5 | 27.01 |
| TraesCS2D01G078600.1 | Wheat | extracellular | 21.19 | 26.78 |
| TraesCS6D01G218500.1 | Wheat | extracellular | 23.51 | 26.49 |
| TraesCS6D01G231200.1 | Wheat | extracellular | 25.17 | 26.48 |
| TraesCS2D01G459300.1 | Wheat | extracellular | 23.18 | 26.42 |
| TraesCS3D01G000400.1 | Wheat | cytosol | 17.22 | 25.62 |
| TraesCS3D01G000500.1 | Wheat | extracellular | 23.18 | 25.55 |
| TraesCS3D01G482800.1 | Wheat | extracellular | 24.17 | 25.35 |
| TraesCS3D01G476800.1 | Wheat | extracellular | 16.23 | 25.26 |
| TraesCS6D01G037600.1 | Wheat | mitochondrion | 9.6 | 25.0 |
| TraesCS6D01G231300.1 | Wheat | extracellular | 23.84 | 24.91 |
| TraesCS1D01G215400.1 | Wheat | extracellular | 21.52 | 24.62 |
| TraesCS6D01G037500.1 | Wheat | extracellular | 22.19 | 24.54 |
| TraesCS2D01G369200.2 | Wheat | extracellular | 22.52 | 24.37 |
| TraesCS6D01G037700.1 | Wheat | extracellular | 21.85 | 24.18 |
| TraesCS1D01G211500.1 | Wheat | extracellular | 21.19 | 24.15 |
| TraesCS5D01G384200.1 | Wheat | extracellular | 24.17 | 23.7 |
| TraesCS3D01G474800.1 | Wheat | extracellular | 23.84 | 22.93 |
| TraesCS6D01G198400.1 | Wheat | extracellular | 22.52 | 22.74 |
| TraesCS4D01G355800.1 | Wheat | extracellular | 19.87 | 22.22 |
| TraesCS4D01G355100.1 | Wheat | extracellular | 19.87 | 22.22 |
| TraesCS3D01G476700.1 | Wheat | extracellular | 22.52 | 22.15 |
| TraesCS4D01G361700.1 | Wheat | extracellular | 22.52 | 21.52 |
| TraesCS4D01G355700.1 | Wheat | extracellular | 18.87 | 21.27 |
| TraesCS4D01G361900.1 | Wheat | extracellular | 20.86 | 21.21 |
| TraesCS1D01G215500.1 | Wheat | extracellular | 21.85 | 20.95 |
| TraesCS1D01G215200.1 | Wheat | extracellular, mitochondrion, nucleus, plastid | 21.52 | 20.7 |
| TraesCS1D01G215100.1 | Wheat | plastid | 18.87 | 20.14 |
| TraesCS5D01G086000.1 | Wheat | extracellular, plasma membrane | 22.19 | 19.31 |
Protein Annotations
| Gene3D:2.40.40.10 | Gene3D:2.60.40.760 | MapMan:21.4.2.2 | InterPro:Expan_Lol_pI | InterPro:Expansin/allergen_DPBB_dom | InterPro:Expansin_CBD |
| InterPro:Expansin_CBD_sf | GO:GO:0005575 | GO:GO:0005576 | InterPro:IPR007112 | InterPro:IPR007117 | InterPro:IPR036749 |
| InterPro:IPR036908 | PFAM:PF01357 | PFAM:PF03330 | PRINTS:PR01225 | PFscan:PS50842 | PFscan:PS50843 |
| PANTHER:PTHR31692 | PANTHER:PTHR31692:SF4 | InterPro:RlpA-like_DPBB | InterPro:RlpA-like_sf | SUPFAM:SSF49590 | SUPFAM:SSF50685 |
| SignalP:SignalP-noTM | EnsemblPlantsGene:TraesCS4D01G323800 | EnsemblPlants:TraesCS4D01G323800.2 | SEG:seg | : | : |
Description
No Description!
Coordinates
chr4D:+:484808667..484809668
Molecular Weight (calculated)
32185.7 Da
IEP (calculated)
6.492
GRAVY (calculated)
0.177
Length
302 amino acids
Sequence
(BLAST)
(BLAST)
001: MAVSRCSILL LPLLFLSTLT PPASACDSCV HRTKAAYYAS SLTLAGTIHI LHLHTHALFL PIHGTCMVLI VRLSCLAAGS CGYGTAAASL NGDLLAGTGP
101: ALYRQGVGCG ACFQVRCKEE ELCTTAGVKV VVTDRASTKT NDTDLVLSSP AFAAMARPGM AGRLAKLGAV DVEYKRVPCV YEGKNLSVRV DERSRAPSEL
201: AVTILYQGGQ TDIVEIDVAQ VGSFNWMFMT HDHGPAWSTS EAPPGPLQLR AVVTSGFDGA WVYAEHEVLP RQWHAGEVYD TGVQITAIAQ EACSPCDTQE
301: WK
101: ALYRQGVGCG ACFQVRCKEE ELCTTAGVKV VVTDRASTKT NDTDLVLSSP AFAAMARPGM AGRLAKLGAV DVEYKRVPCV YEGKNLSVRV DERSRAPSEL
201: AVTILYQGGQ TDIVEIDVAQ VGSFNWMFMT HDHGPAWSTS EAPPGPLQLR AVVTSGFDGA WVYAEHEVLP RQWHAGEVYD TGVQITAIAQ EACSPCDTQE
301: WK
001: MATSFFAGHI AAAIPSIYKD GAGCGACFQV RCKNPKLCNS KGTIVMVTDL NTSNQTDLVL SSRAFRAMAK PVVGVDKYLL KQGIVDVEYQ RVPCNYGKRN
101: LNVRVEEASK KPNYLAIKLL YQGGQTEVVG IDIAPVGSSQ WSYMSRSHGA VWATDKVPTG ALQFKFTVTG GYDGKTVWSK RVLPANWNSG RIYDAGVQIT
201: DIAQEGCDTC GHIWN
101: LNVRVEEASK KPNYLAIKLL YQGGQTEVVG IDIAPVGSSQ WSYMSRSHGA VWATDKVPTG ALQFKFTVTG GYDGKTVWSK RVLPANWNSG RIYDAGVQIT
201: DIAQEGCDTC GHIWN
Arabidopsis Description
EXLA3Expansin-like A3 [Source:UniProtKB/Swiss-Prot;Acc:Q9LZT5]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.