Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- extracellular 7
- golgi 5
- endoplasmic reticulum 5
- plastid 2
- plasma membrane 4
- vacuole 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY69288 | Canola | extracellular | 86.79 | 87.12 |
| Bra033563.1-P | Field mustard | extracellular | 86.79 | 87.12 |
| CDY72634 | Canola | extracellular | 85.66 | 85.66 |
| CDY64278 | Canola | extracellular | 85.66 | 85.66 |
| AT3G45970.1 | Thale cress | extracellular | 85.28 | 85.28 |
| Bra011899.1-P | Field mustard | extracellular | 86.42 | 85.13 |
| CDY61895 | Canola | extracellular | 86.42 | 85.13 |
| CDY52801 | Canola | extracellular | 86.04 | 84.76 |
| AT3G45960.2 | Thale cress | extracellular | 79.62 | 80.23 |
| KRH24119 | Soybean | extracellular | 64.53 | 65.52 |
| KRH29091 | Soybean | extracellular | 63.77 | 65.25 |
| VIT_03s0038g03430.t01 | Wine grape | extracellular | 62.26 | 63.71 |
| PGSC0003DMT400047948 | Potato | extracellular | 61.51 | 62.69 |
| Solyc01g112000.2.1 | Tomato | extracellular | 60.0 | 60.92 |
| GSMUA_Achr11P... | Banana | extracellular | 60.0 | 59.77 |
| GSMUA_Achr5P19030_001 | Banana | extracellular | 57.74 | 57.95 |
| GSMUA_Achr5P11590_001 | Banana | extracellular | 55.85 | 56.7 |
| TraesCS4B01G326900.1 | Wheat | extracellular | 55.85 | 53.82 |
| GSMUA_AchrUn_... | Banana | extracellular | 38.11 | 53.72 |
| TraesCS5A01G498900.1 | Wheat | extracellular | 55.47 | 53.45 |
| TraesCS4D01G323600.1 | Wheat | extracellular | 55.85 | 53.43 |
| EER95568 | Sorghum | extracellular | 54.34 | 53.33 |
| GSMUA_Achr11P... | Banana | extracellular | 53.21 | 53.21 |
| HORVU4Hr1G081990.2 | Barley | extracellular | 55.85 | 52.86 |
| TraesCS4B01G327200.1 | Wheat | extracellular | 53.21 | 52.61 |
| Zm00001d048344_P002 | Maize | extracellular | 53.58 | 51.82 |
| TraesCS4D01G324000.1 | Wheat | extracellular | 53.21 | 51.65 |
| Zm00001d027520_P001 | Maize | extracellular | 53.96 | 51.44 |
| TraesCS4D01G323900.1 | Wheat | golgi | 52.45 | 51.29 |
| TraesCS5A01G499300.1 | Wheat | nucleus | 52.83 | 51.28 |
| Os03t0132200-01 | Rice | extracellular, plastid | 52.45 | 49.82 |
| TraesCS5A01G499100.1 | Wheat | extracellular | 46.42 | 49.2 |
| Os10t0542400-01 | Rice | extracellular | 50.94 | 49.09 |
| Zm00001d029783_P003 | Maize | extracellular | 50.94 | 49.09 |
| TraesCS1B01G217200.1 | Wheat | extracellular | 50.94 | 49.09 |
| GSMUA_Achr1P02170_001 | Banana | extracellular, peroxisome, plastid | 56.6 | 48.86 |
| HORVU1Hr1G052290.4 | Barley | extracellular | 50.94 | 48.74 |
| TraesCS4B01G327100.1 | Wheat | golgi | 49.81 | 48.71 |
| HORVU4Hr1G081800.6 | Barley | extracellular, golgi, plastid | 54.72 | 48.49 |
| TraesCS5A01G499200.1 | Wheat | extracellular | 47.92 | 48.29 |
| TraesCS1A01G203200.1 | Wheat | extracellular | 50.94 | 47.87 |
| KXG38992 | Sorghum | extracellular | 50.19 | 47.16 |
| TraesCS1D01G206700.1 | Wheat | extracellular | 50.19 | 47.0 |
| Os07t0475400-01 | Rice | extracellular | 48.3 | 46.38 |
| EER99370 | Sorghum | extracellular | 46.79 | 45.26 |
| Zm00001d006360_P001 | Maize | extracellular | 45.66 | 44.49 |
| TraesCS4D01G323800.2 | Wheat | extracellular | 50.57 | 44.37 |
| AT4G17030.1 | Thale cress | extracellular | 32.08 | 34.0 |
| TraesCS7A01G545900.1 | Wheat | extracellular | 39.62 | 33.98 |
| HORVU7Hr1G119340.3 | Barley | extracellular, golgi, plastid | 39.25 | 33.66 |
| TraesCS7A01G545800.1 | Wheat | extracellular | 38.11 | 33.55 |
| TraesCS7D01G532200.1 | Wheat | extracellular | 38.87 | 33.33 |
| HORVU7Hr1G119200.1 | Barley | golgi, plastid, vacuole | 39.62 | 33.23 |
| TraesCSU01G099200.1 | Wheat | endoplasmic reticulum, extracellular | 38.49 | 33.12 |
| TraesCS7D01G532400.1 | Wheat | extracellular | 37.74 | 32.47 |
| TraesCS7A01G546300.1 | Wheat | endoplasmic reticulum, extracellular | 39.25 | 32.4 |
| TraesCS7B01G469200.1 | Wheat | endoplasmic reticulum, extracellular | 38.87 | 32.29 |
| TraesCS7B01G468700.1 | Wheat | endoplasmic reticulum, extracellular | 38.49 | 32.28 |
| HORVU7Hr1G119220.1 | Barley | extracellular, golgi, plastid | 38.11 | 32.27 |
| Os06t0725300-01 | Rice | endoplasmic reticulum | 37.36 | 31.63 |
| TraesCS7A01G546000.1 | Wheat | endoplasmic reticulum, extracellular | 38.49 | 31.58 |
| TraesCS7D01G532500.1 | Wheat | extracellular | 38.11 | 31.46 |
| TraesCSU01G099100.1 | Wheat | extracellular, golgi | 36.98 | 31.41 |
| AT1G65680.1 | Thale cress | extracellular | 30.57 | 29.67 |
| Zm00001d014826_P001 | Maize | endoplasmic reticulum, extracellular, vacuole | 35.47 | 29.47 |
| AT1G65681.1 | Thale cress | cytosol | 24.53 | 29.15 |
| AT2G20750.1 | Thale cress | extracellular | 27.17 | 26.57 |
| AT2G45110.1 | Thale cress | extracellular | 25.28 | 25.87 |
| AT4G28250.1 | Thale cress | extracellular | 24.53 | 24.62 |
| KXG20919 | Sorghum | plastid | 38.87 | 23.25 |
| AT3G60570.1 | Thale cress | extracellular | 22.64 | 22.73 |
| TraesCS7B01G469100.1 | Wheat | endoplasmic reticulum, extracellular, plasma membrane | 37.74 | 15.53 |
Protein Annotations
| Gene3D:2.40.40.10 | Gene3D:2.60.40.760 | MapMan:21.4.2.2 | EntrezGene:829997 | UniProt:A0A178V2B6 | ProteinID:AEE86923.1 |
| EMBL:AF378855 | ArrayExpress:AT4G38400 | EnsemblPlantsGene:AT4G38400 | RefSeq:AT4G38400 | TAIR:AT4G38400 | RefSeq:AT4G38400-TAIR-G |
| EnsemblPlants:AT4G38400.1 | TAIR:AT4G38400.1 | Symbol:ATEXLA2 | EMBL:AY050470 | Unigene:At.2766 | ProteinID:CAB37496.1 |
| ProteinID:CAB80505.1 | InterPro:Expan_Lol_pI | InterPro:Expansin/allergen_DPBB_dom | InterPro:Expansin_CBD | InterPro:Expansin_CBD_sf | GO:GO:0000003 |
| GO:GO:0005575 | GO:GO:0005576 | GO:GO:0008150 | GO:GO:0019953 | InterPro:IPR007112 | InterPro:IPR007117 |
| InterPro:IPR036749 | InterPro:IPR036908 | InterPro:LolPI | RefSeq:NP_195553.1 | ProteinID:OAO99853.1 | PFAM:PF01357 |
| PFAM:PF03330 | PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 |
| PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 |
| PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0009005 |
| PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 |
| PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 |
| PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 | PRINTS:PR00829 | PRINTS:PR01225 | PFscan:PS50842 |
| PFscan:PS50843 | PANTHER:PTHR31692 | PANTHER:PTHR31692:SF4 | UniProt:Q9SVE5 | InterPro:RlpA-like_DPBB | InterPro:RlpA-like_sf |
| SUPFAM:SSF49590 | SUPFAM:SSF50685 | SignalP:SignalP-noTM | UniParc:UPI000012A35A | SEG:seg | : |
Description
EXLA2Expansin-like A2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SVE5]
Coordinates
chr4:-:17978422..17979740
Molecular Weight (calculated)
28644.2 Da
IEP (calculated)
8.248
GRAVY (calculated)
0.008
Length
265 amino acids
Sequence
(BLAST)
(BLAST)
001: MLQGFLFLLS VVLLFSSSAA ACDRCLHSSK AAYFSSASAL SSGACAYGSM ATGFFAGHIA AALPSIYKDG SGCGACFQVR CKNPTLCSSK GTTVIVTDLN
101: KTNQTDLVLS SRAFRAMAKP VVGADRDLLK QGIVDIEYRR VPCDYGNKKM NVRVEESSKN PNYLAIKLLY QGGQTEVVAI YIAQVGSSHW SYMTRSHGAV
201: WVTDKVPNGA LQFRFVVTAG YDGKMVWSQR VLPANWEAGK SYDAGVQITD IAQEGCDPCD DHIWN
101: KTNQTDLVLS SRAFRAMAKP VVGADRDLLK QGIVDIEYRR VPCDYGNKKM NVRVEESSKN PNYLAIKLLY QGGQTEVVAI YIAQVGSSHW SYMTRSHGAV
201: WVTDKVPNGA LQFRFVVTAG YDGKMVWSQR VLPANWEAGK SYDAGVQITD IAQEGCDPCD DHIWN
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.