Factsheet for AT3G60570.1

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 9
endoplasmic reticulum 5
vacuole 5
plasma membrane 5
golgi 6

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	secretory
BaCelLo:	secretory
EpiLoc:	golgi
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra003421.1-P	Field mustard	extracellular	82.58	81.95
CDX67835	Canola	extracellular	82.58	81.95
CDY71186	Canola	extracellular	83.33	81.18
CDY48362	Canola	extracellular	73.48	54.34
AT1G65681.1	Thale cress	cytosol	45.83	54.26
Bra014484.1-P	Field mustard	extracellular	73.11	53.61
AT2G45110.1	Thale cress	extracellular	51.52	52.51
GSMUA_Achr2P13730_001	Banana	extracellular	46.21	46.56
HORVU2Hr1G013360.1	Barley	extracellular	43.94	46.22
GSMUA_Achr2P13750_001	Banana	extracellular	45.45	45.98
TraesCS2A01G580200.1	Wheat	extracellular	43.56	45.82
GSMUA_Achr2P13740_001	Banana	extracellular	45.45	45.8
TraesCS2D01G104800.1	Wheat	extracellular	43.94	45.67
Zm00001d051368_P001	Maize	extracellular	27.27	45.57
TraesCS2A01G580300.1	Wheat	extracellular	42.8	45.38
TraesCS2D01G078900.1	Wheat	extracellular	43.56	45.28
TraesCS2A01G081200.1	Wheat	extracellular	43.56	45.28
HORVU2Hr1G013380.1	Barley	cytosol, extracellular, mitochondrion	40.53	45.15
TraesCS2B01G095600.1	Wheat	extracellular	43.56	45.1
TraesCS2D01G592900.1	Wheat	extracellular	42.42	44.98
TraesCS2B01G607400.1	Wheat	extracellular	42.42	44.98
AT1G65680.1	Thale cress	extracellular	46.21	44.69
TraesCSU01G009600.1	Wheat	extracellular	42.42	44.27
TraesCS2D01G078800.1	Wheat	extracellular	42.42	44.09
Zm00001d017493_P001	Maize	extracellular	44.32	43.82
HORVU0Hr1G016380.2	Barley	extracellular	43.94	43.77
TraesCS2A01G080800.1	Wheat	extracellular	42.05	43.7
KXG19818	Sorghum	extracellular	42.8	43.63
TraesCS6A01G249700.1	Wheat	extracellular	43.94	43.61
EES07509	Sorghum	extracellular	43.56	43.56
TraesCS2D01G078600.1	Wheat	extracellular	39.39	43.51
TraesCS6A01G249400.2	Wheat	extracellular	43.56	43.4
TraesCS2A01G105200.1	Wheat	extracellular	41.67	43.31
EER88254	Sorghum	extracellular	42.42	43.24
TraesCS6D01G231400.1	Wheat	extracellular	43.56	43.23
Os04t0552000-00	Rice	extracellular	43.18	43.18
Os05t0246300-01	Rice	extracellular	43.18	43.18
TraesCS2B01G095700.1	Wheat	extracellular	40.91	42.86
Solyc01g090820.1.1	Tomato	extracellular	41.67	42.8
Zm00001d026170_P001	Maize	extracellular	42.05	42.37
TraesCS2B01G432300.1	Wheat	plastid	42.05	42.37
Solyc10g018500.1.1	Tomato	extracellular	42.42	42.26
Zm00001d045861_P001	Maize	mitochondrion	42.42	42.26
Zm00001d045792_P001	Maize	extracellular	42.42	41.48
EES11234	Sorghum	extracellular	41.29	41.44
Os02t0658600-00	Rice	plastid	42.8	41.39
TraesCS2D01G411000.1	Wheat	extracellular	40.91	41.22
TraesCS2A01G413600.1	Wheat	extracellular	40.91	41.22
TraesCS2B01G122100.1	Wheat	extracellular	28.79	39.79
Solyc05g052330.1.1	Tomato	extracellular	39.39	38.81
AT4G28250.1	Thale cress	extracellular	38.64	38.64
HORVU2Hr1G097480.1	Barley	extracellular	41.29	38.52
PGSC0003DMT400030395	Potato	cytosol, extracellular, mitochondrion, nucleus	18.94	38.46
GSMUA_AchrUn_...	Banana	extracellular	26.14	38.33
HORVU2Hr1G013340.1	Barley	extracellular	39.02	35.27
Solyc07g049540.1.1	Tomato	extracellular	34.09	35.02
PGSC0003DMT400095086	Potato	plastid	32.2	34.0
AT2G20750.1	Thale cress	extracellular	34.85	33.95
TraesCS5D01G384200.1	Wheat	extracellular	38.64	33.12
TraesCS5B01G376500.1	Wheat	extracellular	38.64	33.01
Os03t0645000-00	Rice	mitochondrion	36.74	30.99
EER93754	Sorghum	extracellular	35.61	30.72
KXG37946	Sorghum	extracellular	36.74	29.85
AT3G45960.2	Thale cress	extracellular	25.38	25.48
AT4G17030.1	Thale cress	extracellular	23.86	25.2
AT3G45970.1	Thale cress	extracellular	24.62	24.53
HORVU5Hr1G092910.9	Barley	plastid	37.88	24.15
AT4G38400.1	Thale cress	extracellular	22.73	22.64
Zm00001d033231_P003	Maize	extracellular	35.23	13.03

Protein Annotations

Gene3D:2.40.40.10	Gene3D:2.60.40.760	MapMan:35.1	EntrezGene:825228	ProteinID:AEE80080.2	ArrayExpress:AT3G60570
EnsemblPlantsGene:AT3G60570	RefSeq:AT3G60570	TAIR:AT3G60570	RefSeq:AT3G60570-TAIR-G	EnsemblPlants:AT3G60570.1	TAIR:AT3G60570.1
Symbol:ATEXPB5	ProteinID:CAB81843.1	InterPro:Expan_Lol_pI	InterPro:Expansin/allergen_DPBB_dom	InterPro:Expansin_CBD	InterPro:Expansin_CBD_sf
GO:GO:0000003	GO:GO:0005575	GO:GO:0005576	GO:GO:0005618	GO:GO:0005623	GO:GO:0008150
GO:GO:0009987	GO:GO:0016020	GO:GO:0016043	GO:GO:0019953	GO:GO:0030312	GO:GO:0071555
InterPro:IPR007112	InterPro:IPR007117	InterPro:IPR036749	InterPro:IPR036908	InterPro:LolPI	RefSeq:NP_001319806.1
PFAM:PF01357	PFAM:PF03330	PO:PO:0000013	PO:PO:0000037	PO:PO:0000230	PO:PO:0001016
PO:PO:0001017	PO:PO:0001054	PO:PO:0001078	PO:PO:0001081	PO:PO:0001185	PO:PO:0004507
PO:PO:0007064	PO:PO:0007095	PO:PO:0007098	PO:PO:0007115	PO:PO:0007123	PO:PO:0007611
PO:PO:0007616	PO:PO:0009005	PO:PO:0009006	PO:PO:0009009	PO:PO:0009010	PO:PO:0009025
PO:PO:0009029	PO:PO:0009030	PO:PO:0009031	PO:PO:0009032	PO:PO:0009046	PO:PO:0009047
PO:PO:0009052	PO:PO:0020030	PO:PO:0020038	PO:PO:0020137	PO:PO:0025022	PO:PO:0025195
PO:PO:0025281	PRINTS:PR00829	PRINTS:PR01225	PFscan:PS50842	PFscan:PS50843	PANTHER:PTHR31692
PANTHER:PTHR31692:SF3	UniProt:Q9M203	InterPro:RlpA-like_DPBB	InterPro:RlpA-like_sf	SMART:SM00837	SUPFAM:SSF49590
SUPFAM:SSF50685	SignalP:SignalP-noTM	UniParc:UPI000012A337	SEG:seg	:	:

Description

EXPB5Expansin-B5 [Source:UniProtKB/Swiss-Prot;Acc:Q9M203]

Coordinates

chr3:+:22391153..22392708

Molecular Weight (calculated)

28690.0 Da

IEP (calculated)

9.866

GRAVY (calculated)

-0.214

Length

264 amino acids

Sequence
(BLAST)

001: MASSSLKCFS FIVVLTTFFA ISLKPCYCHN KTHWNTAGIT WYGDREGPGT TGGACGYGDA VAKHPYRCMV SAGGPSLFKD GKGCGACYRL KCDHPLCTKK
101: PIKVMISDEC PGCTKESVHF DLSGKAFGAL AKRGKGDQLR NLGELKVSYK RACCKHPKTM IAIHVDAGAN PYYMSFAVKF ANGDGNFACI EVQPAGGQYM
201: KMEEMRSAVW RLSPGVPLKG PFNIRLTSAV SGKKIIAKGV IPEKWSPGAI YHSKVNFPVQ RKQK

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.