Factsheet for Os05t0246300-01

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 8
endoplasmic reticulum 5
vacuole 5
plasma membrane 5
golgi 6
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	plastid, secretory
BaCelLo:	secretory
EpiLoc:	golgi
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	extracellular

extracellular: 24083427

msms PMID: 24083427 doi

T Shinano, T Yoshimura, T Watanabe, Y Unno, M Osaki, Y Nanjo, S Komatsu

Agricultural Radiation Research Center, NARO Tohoku Agricultural Research Center , 50, Harajyukuminami, Arai, Fukushima 960-2156, Japan.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os04t0552000-00	Rice	extracellular	92.42	92.42
EES11234	Sorghum	extracellular	79.92	80.23
Zm00001d026170_P001	Maize	extracellular	78.79	79.39
TraesCS2D01G411000.1	Wheat	extracellular	78.03	78.63
TraesCS2A01G413600.1	Wheat	extracellular	77.65	78.24
TraesCS2B01G432300.1	Wheat	plastid	77.27	77.86
HORVU2Hr1G097480.1	Barley	extracellular	78.79	73.5
Os02t0658600-00	Rice	plastid	69.32	67.03
GSMUA_AchrUn_...	Banana	extracellular	62.5	62.5
Solyc01g090810.2.1	Tomato	extracellular	62.5	60.0
VIT_15s0021g02670.t01	Wine grape	extracellular	61.74	59.71
VIT_15s0021g02700.t01	Wine grape	extracellular	60.61	58.61
Os04t0552200-00	Rice	plasma membrane	60.61	58.18
CDY18948	Canola	extracellular	42.05	56.92
PGSC0003DMT400048506	Potato	plastid	41.67	56.7
GSMUA_Achr4P26910_001	Banana	extracellular	57.95	56.25
AT1G65680.1	Thale cress	extracellular	56.06	54.21
Os02t0658800-01	Rice	extracellular	59.85	54.11
KRH33426	Soybean	extracellular	55.68	54.04
CDY18951	Canola	extracellular	56.06	53.82
KRG88934	Soybean	extracellular, vacuole	55.3	52.71
KRH75302	Soybean	extracellular	55.3	52.71
CDY72655	Canola	cytosol, plastid	33.71	52.66
CDY70406	Canola	extracellular	54.55	52.55
CDX74710	Canola	extracellular	54.17	52.19
Os03t0645000-00	Rice	mitochondrion	61.74	52.08
Bra004889.1-P	Field mustard	extracellular	54.17	52.0
CDY18950	Canola	cytosol, extracellular, plastid	46.59	51.9
CDY72505	Canola	cytosol	31.44	51.88
CDY72345	Canola	cytosol	47.73	51.64
KRH33423	Soybean	extracellular	54.17	51.62
VIT_09s0002g08510.t01	Wine grape	extracellular	54.55	51.61
KRH65410	Soybean	extracellular	51.52	50.94
AT1G65681.1	Thale cress	cytosol	42.8	50.67
AT2G45110.1	Thale cress	extracellular	49.24	50.19
Os10t0555900-02	Rice	extracellular	50.76	50.0
Solyc10g018500.1.1	Tomato	extracellular	49.62	49.43
CDX74711	Canola	extracellular	48.86	49.43
Solyc03g093390.2.1	Tomato	extracellular, nucleus	52.65	48.77
CDX96901	Canola	extracellular	48.86	48.68
Bra035987.1-P	Field mustard	extracellular	48.86	48.68
CDY14888	Canola	extracellular	48.86	48.68
CDX83404	Canola	extracellular	47.35	48.26
Bra000370.1-P	Field mustard	extracellular	47.35	48.26
CDY18946	Canola	extracellular	48.11	47.74
Os10t0555600-01	Rice	extracellular	48.86	46.91
Os03t0102500-01	Rice	extracellular	48.86	46.74
Solyc01g090820.1.1	Tomato	extracellular	43.56	44.75
Os10t0555700-02	Rice	extracellular	43.56	44.06
PGSC0003DMT400030395	Potato	cytosol, extracellular, mitochondrion, nucleus	21.59	43.85
Bra004890.1-P	Field mustard	extracellular	52.65	43.71
Solyc05g052330.1.1	Tomato	extracellular	44.32	43.66
Os10t0548600-01	Rice	plasma membrane	44.32	43.49
Os03t0102700-01	Rice	plastid	45.83	43.37
CDX95627	Canola	extracellular	45.83	43.37
AT3G60570.1	Thale cress	extracellular	43.18	43.18
Solyc07g049540.1.1	Tomato	extracellular	41.67	42.8
Os10t0556100-01	Rice	extracellular	45.83	42.31
Os02t0639500-01	Rice	extracellular	41.29	41.76
PGSC0003DMT400095086	Potato	plastid	38.64	40.8
CDX74713	Canola	extracellular	52.65	40.52
Os03t0106800-01	Rice	plasma membrane	40.91	40.45
Bra004891.1-P	Field mustard	cytosol, nucleus, plastid	20.83	39.86
CDY71186	Canola	extracellular	40.53	39.48
CDX67835	Canola	extracellular	39.77	39.47
Bra003421.1-P	Field mustard	extracellular	39.77	39.47
Os03t0106500-01	Rice	plasma membrane	38.26	37.83
Os03t0106900-00	Rice	extracellular	38.26	37.83
Os03t0106700-00	Rice	extracellular	31.82	36.84
Bra014484.1-P	Field mustard	extracellular	43.56	31.94
CDY48362	Canola	extracellular	43.18	31.93
PGSC0003DMT400066943	Potato	cytosol, plastid, vacuole	54.55	31.37
Os07t0496250-01	Rice	extracellular	28.03	28.91
Os03t0132200-01	Rice	extracellular, plastid	29.92	28.32
Os07t0475400-01	Rice	extracellular	29.55	28.26
Os10t0542400-01	Rice	extracellular	28.41	27.27
Os04t0530100-01	Rice	extracellular, mitochondrion, vacuole	28.79	23.53
Os06t0725300-01	Rice	endoplasmic reticulum	21.97	18.53

Protein Annotations

Gene3D:2.40.40.10	Gene3D:2.60.40.760	MapMan:35.1	EntrezGene:4338206	ProteinID:AAV43978.1	EMBL:AK101313
ProteinID:BAF16929.1	ProteinID:BAS93000.1	InterPro:Expan_Lol_pI	InterPro:Expansin/allergen_DPBB_dom	InterPro:Expansin_CBD	InterPro:Expansin_CBD_sf
GO:GO:0000003	GO:GO:0005575	GO:GO:0005576	GO:GO:0005618	GO:GO:0005623	GO:GO:0008150
GO:GO:0009987	GO:GO:0016020	GO:GO:0016043	GO:GO:0019953	GO:GO:0030312	GO:GO:0071555
InterPro:IPR007112	InterPro:IPR007117	InterPro:IPR036749	InterPro:IPR036908	InterPro:LolPI	EnsemblPlantsGene:Os05g0246300
EnsemblPlants:Os05t0246300-01	PFAM:PF01357	PFAM:PF03330	PRINTS:PR00829	PRINTS:PR01225	PFscan:PS50842
PFscan:PS50843	PANTHER:PTHR31692	PANTHER:PTHR31692:SF52	UniProt:Q5W6Z9	InterPro:RlpA-like_DPBB	InterPro:RlpA-like_sf
SMART:SM00837	SUPFAM:SSF49590	SUPFAM:SSF50685	SignalP:SignalP-noTM	UniParc:UPI00004548B1	RefSeq:XP_015638415.1
SEG:seg	:	:	:	:	:

Description

EXPB18Barwin-related endoglucanase domain containing protein. (Os05t0246300-01)

Coordinates

chr5:-:8870363..8871941

Molecular Weight (calculated)

27154.1 Da

IEP (calculated)

7.116

GRAVY (calculated)

0.111

Length

264 amino acids

Sequence
(BLAST)

001: MNSKFQLILS TFVVIAAFTL LPRPCASIEF HRKLSSWSNG GATWYGAANG AGSDGGACGY QAAVDQAPFS SMIAAGSPSI YKSGLGCGSC YQVKCSGNSA
101: CSGNPVTVVL TDECPGGPCL SEPVHFDLSG TAFGAMANPG QADQLRAAGV LQIQYNRVPC NWGGVMLTFA VDAGSNPSYF AVLVKYENGD GDLSGMDLMQ
201: TGAGAAWTPM QQSWGAVWKL SAGAALQAPL SIRLTSSSGK TLVASNVIPS GWKPGASYTS TVNY

Best Arabidopsis Sequence Match ( AT1G65680.1 )
(BLAST)

001: MTILVVDRYY MLMNLLFALT CLLLNLTHCF SPKKFNISAA TTSDSDWSIA GSTWYGNPTG YGSDGGACGY GNAVAQPPFS KMVSAGGPSL FKSGKGCGAC
101: YQVKCTSKSA CSKNPVTVVI TDECPGCVKE SVHFDLSGTA FGAMAISGQD SQLRNVGELQ ILYKKVECNY IGKTVTFQVD KGSNANSFAV LVAYVNGDGE
201: IGRIELKQAL DSDKWLSMSQ SWGAVWKLDV SSPLRAPLSL RVTSLESGKT VVASNVIPAN WQPGAIYKSN VNF

Arabidopsis Description

EXPB2Putative expansin-B2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SHY6]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.