Factsheet for Os10t0555700-02

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 10
endoplasmic reticulum 5
vacuole 5
plasma membrane 5
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	secretory
BaCelLo:	secretory
EpiLoc:	extracellular
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	extracellular

extracellular: 24083427

msms PMID: 24083427 doi

T Shinano, T Yoshimura, T Watanabe, Y Unno, M Osaki, Y Nanjo, S Komatsu

Agricultural Radiation Research Center, NARO Tohoku Agricultural Research Center , 50, Harajyukuminami, Arai, Fukushima 960-2156, Japan.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1D01G215300.1	Wheat	extracellular	74.33	70.8
TraesCS1A01G212300.1	Wheat	extracellular	74.33	70.8
Zm00001d047091_P001	Maize	extracellular	70.11	67.03
EER91945	Sorghum	extracellular	70.11	66.3
Os10t0555600-01	Rice	extracellular	69.73	66.18
Zm00001d029907_P001	Maize	extracellular	68.97	65.93
Os10t0555900-02	Rice	extracellular	66.67	64.93
TraesCS1B01G225900.1	Wheat	extracellular, mitochondrion, plastid	72.41	63.42
Os03t0102700-01	Rice	plastid	65.9	61.65
Os10t0556100-01	Rice	extracellular	67.05	61.19
Os03t0102500-01	Rice	extracellular	58.24	55.07
Os10t0548600-01	Rice	plasma membrane	52.87	51.3
Os03t0106800-01	Rice	plasma membrane	49.04	47.94
Os03t0106900-00	Rice	extracellular	46.74	45.69
Os03t0106500-01	Rice	plasma membrane	46.74	45.69
Os04t0552000-00	Rice	extracellular	44.44	43.94
Os05t0246300-01	Rice	extracellular	44.06	43.56
Os04t0552200-00	Rice	plasma membrane	45.21	42.91
Os02t0658600-00	Rice	plastid	44.83	42.86
GSMUA_AchrUn_...	Banana	extracellular	14.56	41.3
Os03t0106700-00	Rice	extracellular	36.02	41.23
Os02t0658800-01	Rice	extracellular	45.59	40.75
Os02t0639500-01	Rice	extracellular	35.63	35.63
Os03t0645000-00	Rice	mitochondrion	41.76	34.82
Os07t0496250-01	Rice	extracellular	26.05	26.56
Os03t0132200-01	Rice	extracellular, plastid	26.82	25.09
Os10t0542400-01	Rice	extracellular	26.05	24.73
Os07t0475400-01	Rice	extracellular	23.37	22.1
Os04t0530100-01	Rice	extracellular, mitochondrion, vacuole	25.67	20.74
Os06t0725300-01	Rice	endoplasmic reticulum	22.99	19.17

Protein Annotations

Gene3D:2.40.40.10	Gene3D:2.60.40.760	MapMan:35.1	EntrezGene:4349348	ProteinID:AAK15440.1	ProteinID:AAP54968.1
EMBL:AK061068	EMBL:AK104128	ProteinID:BAF27187.1	ProteinID:BAT11993.1	ProteinID:EAZ16938.1	InterPro:Expan_Lol_pI
InterPro:Expansin/allergen_DPBB_dom	InterPro:Expansin_CBD	InterPro:Expansin_CBD_sf	GO:GO:0000003	GO:GO:0005575	GO:GO:0005576
GO:GO:0005618	GO:GO:0005623	GO:GO:0008150	GO:GO:0009987	GO:GO:0016020	GO:GO:0016043
GO:GO:0019953	GO:GO:0030312	GO:GO:0071555	InterPro:IPR007112	InterPro:IPR007117	InterPro:IPR036749
InterPro:IPR036908	InterPro:LolPI	UniProt:O24230	EnsemblPlantsGene:Os10g0555700	EnsemblPlants:Os10t0555700-02	PFAM:PF01357
PFAM:PF03330	PRINTS:PR00829	PRINTS:PR01225	PFscan:PS50842	PFscan:PS50843	PANTHER:PTHR31692
PANTHER:PTHR31692:SF19	InterPro:RlpA-like_DPBB	InterPro:RlpA-like_sf	SMART:SM00837	SUPFAM:SSF49590	SUPFAM:SSF50685
SignalP:SignalP-TM	TMHMM:TMhelix	EMBL:U95968	UniParc:UPI000009F39E	RefSeq:XP_015614021.1	:

Description

BETA-EXPANSIN 2Beta-expansin. (Os10t0555700-02)

Coordinates

chr10:-:21835933..21837651

Molecular Weight (calculated)

28687.2 Da

IEP (calculated)

8.998

GRAVY (calculated)

-0.220

Length

261 amino acids

Sequence
(BLAST)

001: MAGASAKVVA MLLSVLATYG FAAGVVYTND WLPAKATWYG QPNGAGPDDN GGACGFKNTN QYPFMSMTSC GNEPLFQDGK GCGACYQIRC TNNPSCSGQP
101: RTVIITDMNY YPVARYHFDL SGTAFGAMAR PGLNDQLRHA GIIDIQFRRV PCYHRGLYVN FHVEAGSNPV YLAVLVEFAN KDGTVVQLDV MESLPSGKPT
201: RVWTPMRRSW GSIWRLDANH RLQGPFSLRM VSESGQTVIA HQVIPANWRA NTNYGSKVQF R

Best Arabidopsis Sequence Match ( AT1G65680.1 )
(BLAST)

001: MTILVVDRYY MLMNLLFALT CLLLNLTHCF SPKKFNISAA TTSDSDWSIA GSTWYGNPTG YGSDGGACGY GNAVAQPPFS KMVSAGGPSL FKSGKGCGAC
101: YQVKCTSKSA CSKNPVTVVI TDECPGCVKE SVHFDLSGTA FGAMAISGQD SQLRNVGELQ ILYKKVECNY IGKTVTFQVD KGSNANSFAV LVAYVNGDGE
201: IGRIELKQAL DSDKWLSMSQ SWGAVWKLDV SSPLRAPLSL RVTSLESGKT VVASNVIPAN WQPGAIYKSN VNF

Arabidopsis Description

EXPB2Putative expansin-B2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SHY6]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.