Factsheet for Os03t0106700-00

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 10
endoplasmic reticulum 5
vacuole 5
plasma membrane 5
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	secretory
BaCelLo:	secretory
EpiLoc:	extracellular
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os03t0106900-00	Rice	extracellular	95.61	81.65
Os03t0106500-01	Rice	plasma membrane	95.61	81.65
Os03t0106800-01	Rice	plasma membrane	81.14	69.29
Zm00001d017735_P001	Maize	extracellular	61.4	55.34
Zm00001d017740_P001	Maize	extracellular	60.96	54.94
TraesCS4B01G362500.1	Wheat	extracellular	64.47	54.44
TraesCS4B01G362600.1	Wheat	extracellular, unclear	64.47	54.44
TraesCS4B01G362100.1	Wheat	extracellular	64.04	54.07
TraesCS4D01G355100.1	Wheat	extracellular	64.04	54.07
TraesCS4D01G355800.1	Wheat	extracellular	64.04	54.07
Zm00001d017736_P001	Maize	cytosol	45.18	53.37
TraesCS4D01G355700.1	Wheat	extracellular	62.72	53.36
TraesCS5A01G530700.1	Wheat	extracellular	63.16	53.33
HORVU4Hr1G086830.1	Barley	extracellular	61.84	53.01
TraesCS5A01G530100.1	Wheat	extracellular	62.72	52.96
EER95683	Sorghum	extracellular	61.4	52.63
OQU93458	Sorghum	extracellular	61.4	52.63
OQU93457	Sorghum	extracellular	61.4	52.63
Zm00001d040608_P001	Maize	extracellular	61.84	52.61
Zm00001d017732_P001	Maize	extracellular	62.28	52.59
Zm00001d017737_P001	Maize	extracellular	62.28	52.59
Zm00001d048384_P001	Maize	extracellular	61.84	52.42
EER95684	Sorghum	extracellular	60.96	52.26
OQU93459	Sorghum	extracellular	60.96	52.26
Zm00001d017733_P001	Maize	extracellular	61.84	52.22
Zm00001d040609_P001	Maize	extracellular	61.4	52.04
OQU93455	Sorghum	extracellular	58.33	51.95
OQU93456	Sorghum	cytosol, extracellular	48.25	51.89
Os10t0548600-01	Rice	plasma membrane	60.09	50.93
HORVU4Hr1G086930.1	Barley	extracellular	60.53	50.37
Zm00001d017731_P001	Maize	extracellular	50.0	48.93
HORVU4Hr1G087070.2	Barley	extracellular, mitochondrion, peroxisome	60.09	48.75
Os10t0555900-02	Rice	extracellular	46.49	39.55
Os03t0102700-01	Rice	plastid	47.81	39.07
Os10t0555600-01	Rice	extracellular	46.49	38.55
Os10t0555700-02	Rice	extracellular	41.23	36.02
Os10t0556100-01	Rice	extracellular	44.3	35.31
Os03t0102500-01	Rice	extracellular	42.54	35.14
GSMUA_AchrUn_...	Banana	extracellular	14.04	34.78
Os04t0552000-00	Rice	extracellular	39.04	33.71
Os04t0552200-00	Rice	plasma membrane	39.47	32.73
Os05t0246300-01	Rice	extracellular	36.84	31.82
Os02t0658600-00	Rice	plastid	37.72	31.5
Zm00001d017734_P001	Maize	cytosol	62.28	31.0
Os02t0658800-01	Rice	extracellular	39.47	30.82
Os02t0639500-01	Rice	extracellular	32.89	28.74
Os03t0645000-00	Rice	mitochondrion	35.96	26.2
Os07t0496250-01	Rice	extracellular	25.44	22.66
Os03t0132200-01	Rice	extracellular, plastid	25.0	20.43
Os10t0542400-01	Rice	extracellular	24.56	20.36
Os07t0475400-01	Rice	extracellular	22.37	18.48
Os04t0530100-01	Rice	extracellular, mitochondrion, vacuole	23.25	16.41
Os06t0725300-01	Rice	endoplasmic reticulum	20.61	15.02

Protein Annotations

Gene3D:2.40.40.10	Gene3D:2.60.40.760	MapMan:35.1	ProteinID:AAL24476.1	ProteinID:AAN60489.1	ProteinID:ABF93538.1
ProteinID:BAF10601.1	ProteinID:BAS81875.1	InterPro:Expan_Lol_pI	InterPro:Expansin/allergen_DPBB_dom	InterPro:Expansin_CBD	InterPro:Expansin_CBD_sf
GO:GO:0000003	GO:GO:0005575	GO:GO:0005576	GO:GO:0005618	GO:GO:0005623	GO:GO:0008150
GO:GO:0009987	GO:GO:0016020	GO:GO:0016043	GO:GO:0019953	GO:GO:0030312	GO:GO:0071555
InterPro:IPR007112	InterPro:IPR007117	InterPro:IPR036749	InterPro:IPR036908	InterPro:LolPI	EnsemblPlantsGene:Os03g0106700
EnsemblPlants:Os03t0106700-00	PFAM:PF01357	PFAM:PF03330	PRINTS:PR00829	PRINTS:PR01225	PFscan:PS50842
PFscan:PS50843	PANTHER:PTHR31692	PANTHER:PTHR31692:SF21	UniProt:Q946J4	InterPro:RlpA-like_DPBB	InterPro:RlpA-like_sf
SUPFAM:SSF49590	SUPFAM:SSF50685	SignalP:SignalP-noTM	UniParc:UPI00000AD29E	SEG:seg	:

Description

BETA-EXPANSIN 13Expansin-B13. (Os03t0106700-00)

Coordinates

chr3:+:391571..392374

Molecular Weight (calculated)

24270.9 Da

IEP (calculated)

5.427

GRAVY (calculated)

-0.270

Length

228 amino acids

Sequence
(BLAST)

001: MASSSLLLAS VVVAAMVSAV SCGPPKVPPG PNITASYGDK WLEARATWYG AAKGAGRKDN SGACGYKDVD KAPFLGMNSC GNDPIFKDGK GCGSCFEIKC
101: SKPKACSDKP VLIHVTDMND EPIAAYHFDL FGLAFGAMAK DGKDEELLKY VAGDGDVVEV EIKEKGSEEW KALKESWGAI WRIDTPKPLK GPFSVRVTTE
201: GGEKIIAEDA IPDGWKADSV YKSNVQAK

Best Arabidopsis Sequence Match ( AT1G65680.1 )
(BLAST)

001: MTILVVDRYY MLMNLLFALT CLLLNLTHCF SPKKFNISAA TTSDSDWSIA GSTWYGNPTG YGSDGGACGY GNAVAQPPFS KMVSAGGPSL FKSGKGCGAC
101: YQVKCTSKSA CSKNPVTVVI TDECPGCVKE SVHFDLSGTA FGAMAISGQD SQLRNVGELQ ILYKKVECNY IGKTVTFQVD KGSNANSFAV LVAYVNGDGE
201: IGRIELKQAL DSDKWLSMSQ SWGAVWKLDV SSPLRAPLSL RVTSLESGKT VVASNVIPAN WQPGAIYKSN VNF

Arabidopsis Description

EXPB2Putative expansin-B2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SHY6]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.