Factsheet for Os03t0102500-01

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 9
endoplasmic reticulum 5
vacuole 5
plasma membrane 5
golgi 5
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	plastid, secretory
BaCelLo:	secretory
EpiLoc:	extracellular
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d027281_P001	Maize	extracellular	69.57	70.33
KXG40417	Sorghum	mitochondrion	69.57	64.65
Os10t0556100-01	Rice	extracellular	65.94	63.64
Os10t0555900-02	Rice	extracellular	61.59	63.43
Os10t0555600-01	Rice	extracellular	63.04	63.27
TraesCS5A01G538000.1	Wheat	extracellular	64.13	62.32
TraesCS4B01G375200.1	Wheat	extracellular	64.49	60.96
TraesCS4D01G361900.1	Wheat	extracellular	64.13	59.6
Os10t0555700-02	Rice	extracellular	55.07	58.24
Os03t0102700-01	Rice	plastid	58.33	57.71
Os10t0548600-01	Rice	plasma membrane	52.17	53.53
GSMUA_AchrUn_...	Banana	extracellular	16.67	50.0
Os04t0552000-00	Rice	extracellular	47.1	49.24
Os03t0106800-01	Rice	plasma membrane	47.46	49.06
Os05t0246300-01	Rice	extracellular	46.74	48.86
Os03t0106900-00	Rice	extracellular	44.93	46.44
Os03t0106500-01	Rice	plasma membrane	44.93	46.44
Os04t0552200-00	Rice	plasma membrane	44.93	45.09
Os02t0658600-00	Rice	plastid	44.57	45.05
Os02t0658800-01	Rice	extracellular	46.74	44.18
Os03t0106700-00	Rice	extracellular	35.14	42.54
Os02t0639500-01	Rice	extracellular	36.23	38.31
Os03t0645000-00	Rice	mitochondrion	42.03	37.06
Os07t0496250-01	Rice	extracellular	25.36	27.34
Os03t0132200-01	Rice	extracellular, plastid	26.09	25.81
Os10t0542400-01	Rice	extracellular	25.36	25.45
Os07t0475400-01	Rice	extracellular	25.0	25.0
Os06t0725300-01	Rice	endoplasmic reticulum	22.83	20.13
Os04t0530100-01	Rice	extracellular, mitochondrion, vacuole	22.46	19.2

Protein Annotations

Gene3D:2.40.40.10	Gene3D:2.60.40.760	MapMan:35.1	EntrezGene:4331298	ProteinID:ABF93497.1	EMBL:AF261276
EMBL:AK070972	ProteinID:BAF10577.1	ProteinID:BAS81837.1	InterPro:Expan_Lol_pI	InterPro:Expansin/allergen_DPBB_dom	InterPro:Expansin_CBD
InterPro:Expansin_CBD_sf	GO:GO:0000003	GO:GO:0005575	GO:GO:0005576	GO:GO:0005618	GO:GO:0005623
GO:GO:0008150	GO:GO:0009987	GO:GO:0016020	GO:GO:0016043	GO:GO:0019953	GO:GO:0030312
GO:GO:0071555	InterPro:IPR007112	InterPro:IPR007117	InterPro:IPR036749	InterPro:IPR036908	InterPro:LolPI
EnsemblPlantsGene:Os03g0102500	EnsemblPlants:Os03t0102500-01	PFAM:PF01357	PFAM:PF03330	PRINTS:PR00829	PRINTS:PR01225
PFscan:PS50842	PFscan:PS50843	PANTHER:PTHR31692	PANTHER:PTHR31692:SF20	UniProt:Q10T32	InterPro:RlpA-like_DPBB
InterPro:RlpA-like_sf	SMART:SM00837	SUPFAM:SSF49590	SUPFAM:SSF50685	SignalP:SignalP-noTM	TMHMM:TMhelix
UniParc:UPI0000DB4BE4	RefSeq:XP_015632131.1	SEG:seg	:	:	:

Description

EXPB8Similar to Beta-expansin precursor (Fragment). (Os03t0102500-01)

Coordinates

chr3:-:179190..180206

Molecular Weight (calculated)

29763.2 Da

IEP (calculated)

8.368

GRAVY (calculated)

-0.205

Length

276 amino acids

Sequence
(BLAST)

001: MVSGDVGVVV YYLLLVLVVV QGCKGSSAVQ GEGRWYNESE AIGGAAAWGN AKATWYGQPN GAGAADNGGA CGFKKVNQYP FMGMTSCGNQ PLYKGGKGCG
101: SCYRVRCNRN PACSGNAQTV AITDMNYFPL SQYHFDLSGI AFGRLAKPGR ADDLRRAGII DVQFARVPCE FPGLKVGFHV EEGSSPVYLA VLVEYENGDG
201: DVAQVDLKEA GAGGGRWTPM RESWGSVWRL DSNHRLRAPF SIRIRSDSGK TLVAPDVIPL NWTPNTFYRS FVQYSS

Best Arabidopsis Sequence Match ( AT1G65680.1 )
(BLAST)

001: MTILVVDRYY MLMNLLFALT CLLLNLTHCF SPKKFNISAA TTSDSDWSIA GSTWYGNPTG YGSDGGACGY GNAVAQPPFS KMVSAGGPSL FKSGKGCGAC
101: YQVKCTSKSA CSKNPVTVVI TDECPGCVKE SVHFDLSGTA FGAMAISGQD SQLRNVGELQ ILYKKVECNY IGKTVTFQVD KGSNANSFAV LVAYVNGDGE
201: IGRIELKQAL DSDKWLSMSQ SWGAVWKLDV SSPLRAPLSL RVTSLESGKT VVASNVIPAN WQPGAIYKSN VNF

Arabidopsis Description

EXPB2Putative expansin-B2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SHY6]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.