Factsheet for Os10t0556100-01

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 10
endoplasmic reticulum 5
vacuole 5
plasma membrane 5
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	secretory
BaCelLo:	secretory
EpiLoc:	extracellular
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER94500	Sorghum	extracellular	88.81	87.59
Zm00001d029899_P001	Maize	extracellular, mitochondrion	86.01	87.23
TraesCS1A01G212600.1	Wheat	extracellular	83.57	85.97
Zm00001d047087_P001	Maize	extracellular	84.62	84.62
TraesCS1B01G226100.1	Wheat	extracellular	83.57	76.6
TraesCS1D01G215500.1	Wheat	extracellular	84.27	76.51
Os10t0555600-01	Rice	extracellular	71.33	74.18
Os10t0555900-02	Rice	extracellular	65.73	70.15
Os10t0555700-02	Rice	extracellular	61.19	67.05
Os03t0102500-01	Rice	extracellular	63.64	65.94
Os03t0102700-01	Rice	plastid	61.54	63.08
Os03t0106800-01	Rice	plasma membrane	47.2	50.56
Os10t0548600-01	Rice	plasma membrane	47.55	50.56
GSMUA_AchrUn_...	Banana	extracellular	15.73	48.91
Os03t0106900-00	Rice	extracellular	43.71	46.82
Os03t0106500-01	Rice	plasma membrane	43.71	46.82
Os04t0552000-00	Rice	extracellular	42.31	45.83
Os05t0246300-01	Rice	extracellular	42.31	45.83
Os03t0106700-00	Rice	extracellular	35.31	44.3
Os04t0552200-00	Rice	plasma membrane	42.31	44.0
Os02t0658600-00	Rice	plastid	41.96	43.96
Os02t0658800-01	Rice	extracellular	44.76	43.84
Os02t0639500-01	Rice	extracellular	34.97	38.31
Os03t0645000-00	Rice	mitochondrion	39.51	36.1
Os07t0496250-01	Rice	extracellular	24.83	27.73
Os03t0132200-01	Rice	extracellular, plastid	24.48	25.09
Os10t0542400-01	Rice	extracellular	22.73	23.64
Os07t0475400-01	Rice	extracellular	22.73	23.55
Os04t0530100-01	Rice	extracellular, mitochondrion, vacuole	22.38	19.81
Os06t0725300-01	Rice	endoplasmic reticulum	21.68	19.81

Protein Annotations

Gene3D:2.40.40.10	Gene3D:2.60.40.760	MapMan:35.1	EntrezGene:4349350	ProteinID:AAK55466.1	ProteinID:AAP54970.1
EMBL:AF261272	EMBL:AK101357	EMBL:AK105981	ProteinID:BAF27189.1	ProteinID:BAT11997.1	ProteinID:EAZ16940.1
InterPro:Expan_Lol_pI	InterPro:Expansin/allergen_DPBB_dom	InterPro:Expansin_CBD	InterPro:Expansin_CBD_sf	GO:GO:0000003	GO:GO:0005575
GO:GO:0005576	GO:GO:0005618	GO:GO:0005623	GO:GO:0008150	GO:GO:0009987	GO:GO:0016020
GO:GO:0016043	GO:GO:0019953	GO:GO:0030312	GO:GO:0071555	InterPro:IPR007112	InterPro:IPR007117
InterPro:IPR036749	InterPro:IPR036908	InterPro:LolPI	EnsemblPlantsGene:Os10g0556100	EnsemblPlants:Os10t0556100-01	PFAM:PF01357
PFAM:PF03330	PRINTS:PR00829	PRINTS:PR01225	PFscan:PS50842	PFscan:PS50843	PANTHER:PTHR31692
PANTHER:PTHR31692:SF9	UniProt:Q94LR4	InterPro:RlpA-like_DPBB	InterPro:RlpA-like_sf	SMART:SM00837	SUPFAM:SSF49590
SUPFAM:SSF50685	SignalP:SignalP-noTM	UniParc:UPI000009F5DD	RefSeq:XP_015614992.1	SEG:seg	:

Description

BETA-EXPANSIN 4Similar to beta-expansin EXPB4. (Os10t0556100-01);Similar to beta-expansin EXPB4. (Os10t0556100-02);Similar to Expansin-B4. (Os10t0556100-03)

Coordinates

chr10:+:21858853..21861245

Molecular Weight (calculated)

31359.7 Da

IEP (calculated)

6.386

GRAVY (calculated)

-0.317

Length

286 amino acids

Sequence
(BLAST)

001: MGSLSSLAAA AVFLSLLAVG HCAAADFNAT DADADFAGNG VDFNSSDAAV YWGPWTKARA TWYGQPNGAG PDDNGGACGF KHTNQYPFMS MTSCGNQPLF
101: KDGKGCGSCY KIRCTKDQSC SGRSETVIIT DMNYYPVAPF HFDLSGTAFG RLAKPGLNDK LRHSGIIDIE FTRVPCEFPG LKIGFHVEEY SNPVYFAVLV
201: EYEDGDGDVV QVDLMESKTA HGPPTGRWTP MRESWGSIWR LDTNHRLQAP FSIRIRNESG KTLVANNVIP ANWRPNTFYR SFVQYS

Best Arabidopsis Sequence Match ( AT1G65680.1 )
(BLAST)

001: MTILVVDRYY MLMNLLFALT CLLLNLTHCF SPKKFNISAA TTSDSDWSIA GSTWYGNPTG YGSDGGACGY GNAVAQPPFS KMVSAGGPSL FKSGKGCGAC
101: YQVKCTSKSA CSKNPVTVVI TDECPGCVKE SVHFDLSGTA FGAMAISGQD SQLRNVGELQ ILYKKVECNY IGKTVTFQVD KGSNANSFAV LVAYVNGDGE
201: IGRIELKQAL DSDKWLSMSQ SWGAVWKLDV SSPLRAPLSL RVTSLESGKT VVASNVIPAN WQPGAIYKSN VNF

Arabidopsis Description

EXPB2Putative expansin-B2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SHY6]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.