Factsheet for TraesCS1B01G226100.1

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 7
endoplasmic reticulum 4
vacuole 4
plasma membrane 4
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1A01G212600.1	Wheat	extracellular	87.5	98.2
TraesCS1D01G215500.1	Wheat	extracellular	91.67	90.79
Os10t0556100-01	Rice	extracellular	76.6	83.57
Zm00001d047087_P001	Maize	extracellular	72.12	78.67
Zm00001d029899_P001	Maize	extracellular, mitochondrion	70.83	78.37
EER94500	Sorghum	extracellular	71.15	76.55
TraesCS1B01G226000.2	Wheat	extracellular	61.86	71.48
TraesCS4B01G375200.1	Wheat	extracellular	62.82	67.12
TraesCS1B01G225700.1	Wheat	extracellular	61.54	63.58
TraesCS3B01G014400.1	Wheat	cytosol	46.79	58.87
TraesCS3B01G014300.1	Wheat	extracellular, nucleus	51.28	58.39
TraesCS6B01G245700.1	Wheat	extracellular	54.17	57.09
TraesCS6B01G046400.1	Wheat	extracellular	49.36	56.41
TraesCS6B01G046300.1	Wheat	extracellular	49.36	56.41
TraesCS6B01G046200.1	Wheat	extracellular	49.36	56.41
TraesCS6B01G046000.1	Wheat	extracellular	49.36	56.41
TraesCS6B01G046100.1	Wheat	extracellular	49.04	56.04
TraesCS1B01G225900.1	Wheat	extracellular, mitochondrion, plastid	53.21	55.7
TraesCS1B01G225800.1	Wheat	extracellular	47.12	54.24
TraesCS3B01G526800.1	Wheat	extracellular	51.92	54.0
TraesCS3B01G524500.1	Wheat	extracellular	51.92	52.09
TraesCS1B01G222300.1	Wheat	extracellular	42.95	50.57
TraesCS4B01G375600.1	Wheat	extracellular	52.56	48.09
TraesCS5B01G079400.1	Wheat	extracellular, plasma membrane	52.24	47.8
TraesCS2B01G480700.1	Wheat	extracellular	39.74	46.79
GSMUA_AchrUn_...	Banana	extracellular	13.78	46.74
TraesCS2B01G432100.1	Wheat	extracellular	38.78	46.36
TraesCS2B01G432300.1	Wheat	plastid	38.46	45.8
TraesCS2B01G095600.1	Wheat	extracellular	36.54	44.71
TraesCS2B01G607400.1	Wheat	extracellular	35.58	44.58
TraesCS4B01G362500.1	Wheat	extracellular	38.14	44.07
TraesCS4B01G362600.1	Wheat	extracellular, unclear	38.14	44.07
TraesCS4B01G362100.1	Wheat	extracellular	38.14	44.07
TraesCS2B01G095700.1	Wheat	extracellular	35.58	44.05
TraesCS2B01G122100.1	Wheat	extracellular	25.64	41.88
TraesCS6B01G275800.1	Wheat	extracellular	38.14	41.46
TraesCS6B01G275700.1	Wheat	extracellular	37.82	40.83
TraesCS2B01G432200.1	Wheat	extracellular, plastid	36.22	40.21
TraesCS3B01G535800.1	Wheat	extracellular	36.86	39.79
TraesCS5B01G376500.1	Wheat	extracellular	37.5	37.86
TraesCS6B01G264400.1	Wheat	extracellular	31.41	36.57
TraesCS2B01G390000.1	Wheat	extracellular	30.77	34.16
TraesCS4B01G326900.1	Wheat	extracellular	23.4	26.55
TraesCS4B01G327200.1	Wheat	extracellular	22.44	26.12
TraesCS4B01G327100.1	Wheat	golgi	22.12	25.46
TraesCS1B01G217200.1	Wheat	extracellular	18.91	21.45
TraesCS7B01G468700.1	Wheat	endoplasmic reticulum, extracellular	17.95	17.72
TraesCS7B01G469200.1	Wheat	endoplasmic reticulum, extracellular	16.99	16.61
TraesCS7B01G469100.1	Wheat	endoplasmic reticulum, extracellular, plasma membrane	16.99	8.23

Protein Annotations

Gene3D:2.40.40.10	Gene3D:2.60.40.760	MapMan:35.1	InterPro:Expansin/allergen_DPBB_dom	InterPro:Expansin_CBD	InterPro:Expansin_CBD_sf
GO:GO:0000003	GO:GO:0005575	GO:GO:0005576	GO:GO:0008150	GO:GO:0019953	InterPro:IPR007112
InterPro:IPR007117	InterPro:IPR036749	InterPro:IPR036908	InterPro:LolPI	PFAM:PF01357	PFAM:PF03330
PRINTS:PR00829	PFscan:PS50842	PFscan:PS50843	PANTHER:PTHR31692	PANTHER:PTHR31692:SF9	InterPro:RlpA-like_DPBB
InterPro:RlpA-like_sf	SMART:SM00837	SUPFAM:SSF49590	SUPFAM:SSF50685	SignalP:SignalP-noTM	EnsemblPlantsGene:TraesCS1B01G226100
EnsemblPlants:TraesCS1B01G226100.1	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr1B:+:406035744..406037702

Molecular Weight (calculated)

34673.1 Da

IEP (calculated)

6.761

GRAVY (calculated)

-0.285

Length

312 amino acids

Sequence
(BLAST)

001: MGSLPLAVLA ALFCFLAVGG AVELNTTDPA PFDVDLNATD ATKYWGPWTP ARATWYGQPN GAGPDDNGED DAPHPLPPSQ DECFSSLLAR AMWLIPRRFF
101: VLLGGACGFK HTNQYPFASM TSCGNQPLFK DGKGCGSCYK IRCRKDMSCS GRTETVIITD MNYYPVAPFH FDLSGTAFGR LAKPGLNDRL RHSGIIDIEF
201: TRVPCEFPGL KIGFHVEEYS NPVYFAVLVE YEDGDGDVVQ VDLMESRGPG GGKWTRMRES WGSIWRLDSN HRLQAPFSIR IRNESGKTLV ANKVIPANWR
301: PNTFYRSFVQ YS

Best Arabidopsis Sequence Match ( AT1G65680.1 )
(BLAST)

001: MTILVVDRYY MLMNLLFALT CLLLNLTHCF SPKKFNISAA TTSDSDWSIA GSTWYGNPTG YGSDGGACGY GNAVAQPPFS KMVSAGGPSL FKSGKGCGAC
101: YQVKCTSKSA CSKNPVTVVI TDECPGCVKE SVHFDLSGTA FGAMAISGQD SQLRNVGELQ ILYKKVECNY IGKTVTFQVD KGSNANSFAV LVAYVNGDGE
201: IGRIELKQAL DSDKWLSMSQ SWGAVWKLDV SSPLRAPLSL RVTSLESGKT VVASNVIPAN WQPGAIYKSN VNF

Arabidopsis Description

EXPB2Putative expansin-B2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SHY6]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.