Factsheet for TraesCS1B01G225700.1

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 6
endoplasmic reticulum 4
vacuole 4
plasma membrane 5
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1A01G212000.1	Wheat	extracellular	86.42	96.67
TraesCS1D01G215100.1	Wheat	plastid	77.81	83.04
Os10t0555600-01	Rice	extracellular	65.89	72.36
TraesCS1B01G226000.2	Wheat	extracellular	63.91	71.48
TraesCS6B01G046400.1	Wheat	extracellular	57.95	64.1
TraesCS6B01G046000.1	Wheat	extracellular	57.62	63.74
TraesCS6B01G046200.1	Wheat	extracellular	57.62	63.74
TraesCS6B01G046300.1	Wheat	extracellular	57.62	63.74
TraesCS6B01G046100.1	Wheat	extracellular	57.28	63.37
TraesCS1B01G226100.1	Wheat	extracellular	63.58	61.54
TraesCS3B01G014400.1	Wheat	cytosol	50.0	60.89
TraesCS3B01G014300.1	Wheat	extracellular, nucleus	54.3	59.85
TraesCS4B01G375200.1	Wheat	extracellular	57.28	59.25
TraesCS1B01G225900.1	Wheat	extracellular, mitochondrion, plastid	57.62	58.39
TraesCS1B01G225800.1	Wheat	extracellular	52.32	58.3
TraesCS6B01G245700.1	Wheat	extracellular	53.97	55.07
TraesCS3B01G526800.1	Wheat	extracellular	53.31	53.67
TraesCS1B01G222300.1	Wheat	extracellular	46.69	53.21
TraesCS3B01G524500.1	Wheat	extracellular	53.64	52.09
TraesCS2B01G095600.1	Wheat	extracellular	41.39	49.02
TraesCS4B01G375600.1	Wheat	extracellular	55.3	48.97
GSMUA_AchrUn_...	Banana	extracellular	14.9	48.91
TraesCS5B01G079400.1	Wheat	extracellular, plasma membrane	54.97	48.68
TraesCS2B01G480700.1	Wheat	extracellular	42.72	48.68
TraesCS2B01G432100.1	Wheat	extracellular	41.72	48.28
TraesCS4B01G362100.1	Wheat	extracellular	43.05	48.15
TraesCS4B01G362500.1	Wheat	extracellular	42.72	47.78
TraesCS4B01G362600.1	Wheat	extracellular, unclear	42.72	47.78
TraesCS2B01G607400.1	Wheat	extracellular	39.07	47.39
TraesCS2B01G432300.1	Wheat	plastid	41.06	47.33
TraesCS2B01G095700.1	Wheat	extracellular	38.74	46.43
TraesCS6B01G275800.1	Wheat	extracellular	43.38	45.64
TraesCS2B01G432200.1	Wheat	extracellular, plastid	40.4	43.42
TraesCS6B01G275700.1	Wheat	extracellular	41.39	43.25
TraesCS2B01G122100.1	Wheat	extracellular	26.82	42.41
TraesCS3B01G535800.1	Wheat	extracellular	40.4	42.21
TraesCS5B01G376500.1	Wheat	extracellular	39.07	38.19
TraesCS6B01G264400.1	Wheat	extracellular	33.77	38.06
TraesCS2B01G390000.1	Wheat	extracellular	31.46	33.81
TraesCS4B01G327200.1	Wheat	extracellular	22.52	25.37
TraesCS4B01G326900.1	Wheat	extracellular	22.85	25.09
TraesCS4B01G327100.1	Wheat	golgi	21.85	24.35
TraesCS1B01G217200.1	Wheat	extracellular	20.2	22.18
TraesCS7B01G468700.1	Wheat	endoplasmic reticulum, extracellular	20.86	19.94
TraesCS7B01G469200.1	Wheat	endoplasmic reticulum, extracellular	19.54	18.5
TraesCS7B01G469100.1	Wheat	endoplasmic reticulum, extracellular, plasma membrane	20.2	9.47

Protein Annotations

Gene3D:2.40.40.10	Gene3D:2.60.40.760	MapMan:35.1	InterPro:Expansin/allergen_DPBB_dom	InterPro:Expansin_CBD	InterPro:Expansin_CBD_sf
GO:GO:0000003	GO:GO:0005575	GO:GO:0005576	GO:GO:0008150	GO:GO:0019953	InterPro:IPR007112
InterPro:IPR007117	InterPro:IPR036749	InterPro:IPR036908	InterPro:LolPI	PFAM:PF01357	PFAM:PF03330
PRINTS:PR00829	PFscan:PS50842	PFscan:PS50843	PANTHER:PTHR31692	PANTHER:PTHR31692:SF12	InterPro:RlpA-like_DPBB
InterPro:RlpA-like_sf	SMART:SM00837	SUPFAM:SSF49590	SUPFAM:SSF50685	SignalP:SignalP-noTM	EnsemblPlantsGene:TraesCS1B01G225700
EnsemblPlants:TraesCS1B01G225700.1	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr1B:-:405524724..405526198

Molecular Weight (calculated)

32558.9 Da

IEP (calculated)

7.089

GRAVY (calculated)

0.020

Length

302 amino acids

Sequence
(BLAST)

001: MAGLLSVKAI ALAAVLAAAY VSCAAAEQLG AADLDASAVS YSSAWLPARA TWYGAPNGAG PDDNGTCLPC GFILDAAMLS VLMSLLNLVH RCGVHAGGAC
101: GFKHVNQYPF SSMTSCGNQP LFKDGKGCGS CYQIRCTGDK SCSGKIETVM ITDMNYYPVA QYHFDLSGTA FGALAKSGLN EKLRHSGIID IQFRRVPCNF
201: PGLKINFHVV DGSNAVYLAV LIEYEDMDGD VIQVDMKEAK SGSWMAMRES WGSIWRMDSN HRLQGPFSMR ITSDSGKKLV ANDVIPANWR PNTDYRSFVQ
301: FS

Best Arabidopsis Sequence Match ( AT1G65680.1 )
(BLAST)

001: MTILVVDRYY MLMNLLFALT CLLLNLTHCF SPKKFNISAA TTSDSDWSIA GSTWYGNPTG YGSDGGACGY GNAVAQPPFS KMVSAGGPSL FKSGKGCGAC
101: YQVKCTSKSA CSKNPVTVVI TDECPGCVKE SVHFDLSGTA FGAMAISGQD SQLRNVGELQ ILYKKVECNY IGKTVTFQVD KGSNANSFAV LVAYVNGDGE
201: IGRIELKQAL DSDKWLSMSQ SWGAVWKLDV SSPLRAPLSL RVTSLESGKT VVASNVIPAN WQPGAIYKSN VNF

Arabidopsis Description

EXPB2Putative expansin-B2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SHY6]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.