Factsheet for TraesCS1D01G215100.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 3
mitochondrion 2
extracellular 2
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	mitochondrion, plastid, secretory
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	extracellular
PProwler:	secretory
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1A01G212000.1	Wheat	extracellular	75.62	79.26
TraesCS1B01G225700.1	Wheat	extracellular	83.04	77.81
TraesCS1D01G215400.1	Wheat	extracellular	62.9	67.42
Os10t0555600-01	Rice	extracellular	65.02	66.91
TraesCS6D01G037600.1	Wheat	mitochondrion	26.5	64.66
TraesCS3D01G000400.1	Wheat	cytosol	44.88	62.56
TraesCS1D01G215300.1	Wheat	extracellular	56.54	58.39
TraesCS6D01G037700.1	Wheat	extracellular	55.83	57.88
TraesCS6D01G037500.1	Wheat	extracellular	55.48	57.51
TraesCS1D01G215500.1	Wheat	extracellular	62.9	56.51
TraesCS4D01G361900.1	Wheat	extracellular	57.95	55.22
TraesCS3D01G000500.1	Wheat	extracellular	52.3	54.01
TraesCS6D01G198400.1	Wheat	extracellular	54.42	51.51
GSMUA_AchrUn_...	Banana	extracellular	16.61	51.09
TraesCS3D01G476800.1	Wheat	extracellular	33.92	49.48
TraesCS3D01G476700.1	Wheat	extracellular	51.94	47.88
TraesCS4D01G361700.1	Wheat	extracellular	53.36	47.78
TraesCS3D01G474800.1	Wheat	extracellular	51.59	46.5
TraesCS1D01G211500.1	Wheat	extracellular	42.76	45.66
TraesCS1D01G215200.1	Wheat	extracellular, mitochondrion, nucleus, plastid	50.53	45.54
TraesCS2D01G459300.1	Wheat	extracellular	41.34	44.15
TraesCS2D01G078900.1	Wheat	extracellular	39.58	44.09
TraesCS2D01G592900.1	Wheat	extracellular	38.52	43.78
TraesCS2D01G411200.1	Wheat	extracellular	40.28	43.68
TraesCS5D01G086000.1	Wheat	extracellular, plasma membrane	53.36	43.52
TraesCS6D01G231400.1	Wheat	extracellular	40.64	43.23
TraesCS2D01G411000.1	Wheat	extracellular	38.52	41.6
TraesCS4D01G355800.1	Wheat	extracellular	39.58	41.48
TraesCS4D01G355100.1	Wheat	extracellular	39.58	41.48
TraesCS2D01G104800.1	Wheat	extracellular	37.1	41.34
TraesCS4D01G355700.1	Wheat	extracellular	38.87	41.04
TraesCS2D01G078600.1	Wheat	extracellular	34.63	41.0
TraesCS2D01G078800.1	Wheat	extracellular	36.75	40.94
TraesCS6D01G231200.1	Wheat	extracellular	41.34	40.77
TraesCS6D01G231300.1	Wheat	extracellular	40.28	39.45
TraesCS3D01G482800.1	Wheat	extracellular	38.52	37.85
TraesCS2D01G411100.1	Wheat	extracellular, plastid	37.1	37.37
TraesCS5D01G384200.1	Wheat	extracellular	37.1	34.09
TraesCS6D01G218500.1	Wheat	extracellular	31.8	33.58
TraesCS2D01G369200.2	Wheat	extracellular	30.39	30.82
TraesCS4D01G323900.1	Wheat	golgi	22.61	23.62
TraesCS4D01G323600.1	Wheat	extracellular	22.26	22.74
TraesCS4D01G324000.1	Wheat	extracellular	21.55	22.34
TraesCS1D01G206700.1	Wheat	extracellular	20.49	20.49
TraesCS4D01G323800.2	Wheat	extracellular	20.14	18.87
TraesCS7D01G532500.1	Wheat	extracellular	21.2	18.69
TraesCS7D01G532400.1	Wheat	extracellular	19.79	18.18
TraesCS7D01G532200.1	Wheat	extracellular	18.73	17.15

Protein Annotations

Gene3D:2.40.40.10	Gene3D:2.60.40.760	MapMan:35.1	InterPro:Expan_Lol_pI	InterPro:Expansin/allergen_DPBB_dom	InterPro:Expansin_CBD
InterPro:Expansin_CBD_sf	GO:GO:0000003	GO:GO:0005575	GO:GO:0005576	GO:GO:0008150	GO:GO:0019953
InterPro:IPR007112	InterPro:IPR007117	InterPro:IPR036749	InterPro:IPR036908	InterPro:LolPI	PFAM:PF01357
PFAM:PF03330	PRINTS:PR00829	PRINTS:PR01225	PFscan:PS50842	PFscan:PS50843	PANTHER:PTHR31692
PANTHER:PTHR31692:SF12	InterPro:RlpA-like_DPBB	InterPro:RlpA-like_sf	SMART:SM00837	SUPFAM:SSF49590	SUPFAM:SSF50685
EnsemblPlantsGene:TraesCS1D01G215100	EnsemblPlants:TraesCS1D01G215100.1	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr1D:-:300325788..300326758

Molecular Weight (calculated)

31029.2 Da

IEP (calculated)

8.614

GRAVY (calculated)

-0.272

Length

283 amino acids

Sequence
(BLAST)

001: MSLAPPLSSR GRRTSTPPPF LTAPRGFRPE RPGTERPTAP GPTTTVRACP CGCMLDAAML SVLMSLLNLV HPCGVHAGGA CGFKHVNQYP FSSMTSCGNQ
101: PLFKDGKGCG SCYQIRCSGD KSCSGKIETV MITDMNYYPV AQYHFDLSGT AFGALAKSGL NEKLRHSGII DIQFRRVPCN FPGLKINFHV VDGSNAVYLA
201: VLIEYEDMDG DVIQVDMKEA NSGSWTPMRE SWGSIWRMDS NHRLQGPFSM RITSDSGKKL VANNVIPANW RPNTDYRSFV QFS

Best Arabidopsis Sequence Match ( AT1G65680.1 )
(BLAST)

001: MTILVVDRYY MLMNLLFALT CLLLNLTHCF SPKKFNISAA TTSDSDWSIA GSTWYGNPTG YGSDGGACGY GNAVAQPPFS KMVSAGGPSL FKSGKGCGAC
101: YQVKCTSKSA CSKNPVTVVI TDECPGCVKE SVHFDLSGTA FGAMAISGQD SQLRNVGELQ ILYKKVECNY IGKTVTFQVD KGSNANSFAV LVAYVNGDGE
201: IGRIELKQAL DSDKWLSMSQ SWGAVWKLDV SSPLRAPLSL RVTSLESGKT VVASNVIPAN WQPGAIYKSN VNF

Arabidopsis Description

EXPB2Putative expansin-B2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SHY6]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.