Factsheet for TraesCS2D01G411000.1

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 6
endoplasmic reticulum 4
vacuole 4
plasma membrane 4
golgi 4
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	plastid, secretory
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2A01G413600.1	Wheat	extracellular	98.09	98.09
TraesCS2B01G432300.1	Wheat	plastid	95.04	95.04
HORVU2Hr1G097480.1	Barley	extracellular	97.71	90.46
EES11234	Sorghum	extracellular	81.3	80.99
Zm00001d026170_P001	Maize	extracellular	79.77	79.77
Os04t0552000-00	Rice	extracellular	79.01	78.41
Os05t0246300-01	Rice	extracellular	78.63	78.03
TraesCS6D01G231400.1	Wheat	extracellular	70.23	69.17
TraesCS2D01G078900.1	Wheat	extracellular	64.5	66.54
TraesCS2D01G592900.1	Wheat	extracellular	61.07	64.26
TraesCS2D01G104800.1	Wheat	extracellular	59.92	61.81
TraesCS2D01G078800.1	Wheat	extracellular	59.54	61.42
GSMUA_AchrUn_...	Banana	extracellular	61.45	60.98
Solyc01g090810.2.1	Tomato	extracellular	62.6	59.64
VIT_15s0021g02670.t01	Wine grape	extracellular	61.45	58.97
VIT_15s0021g02700.t01	Wine grape	extracellular	61.07	58.61
TraesCS2D01G078600.1	Wheat	extracellular	53.05	58.16
TraesCS5D01G384200.1	Wheat	extracellular	67.94	57.79
CDY18948	Canola	extracellular	42.37	56.92
PGSC0003DMT400048506	Potato	plastid	41.98	56.7
GSMUA_Achr4P26910_001	Banana	extracellular	58.78	56.62
TraesCS2D01G411100.1	Wheat	extracellular, plastid	60.69	56.58
CDY18951	Canola	extracellular	58.02	55.27
TraesCS2D01G411200.1	Wheat	extracellular	54.58	54.79
AT1G65680.1	Thale cress	extracellular	55.34	53.11
KRH33423	Soybean	extracellular	56.11	53.07
CDX74710	Canola	extracellular	55.34	52.92
CDY70406	Canola	extracellular	55.34	52.92
CDY18950	Canola	cytosol, extracellular, plastid	47.71	52.74
Bra004889.1-P	Field mustard	extracellular	55.34	52.73
KRH33426	Soybean	extracellular	54.58	52.57
TraesCS6D01G231200.1	Wheat	extracellular	57.25	52.26
TraesCS3D01G482800.1	Wheat	extracellular	56.87	51.74
TraesCS6D01G231300.1	Wheat	extracellular	56.87	51.56
CDY72655	Canola	cytosol, plastid	33.21	51.48
CDY72345	Canola	cytosol	47.71	51.23
KRH75302	Soybean	extracellular	53.82	50.9
KRG88934	Soybean	extracellular, vacuole	53.82	50.9
VIT_09s0002g08510.t01	Wine grape	extracellular	54.2	50.9
CDY72505	Canola	cytosol	30.92	50.62
CDX83404	Canola	extracellular	49.62	50.19
Bra000370.1-P	Field mustard	extracellular	49.62	50.19
AT2G45110.1	Thale cress	extracellular	49.62	50.19
KRH65410	Soybean	extracellular	51.15	50.19
TraesCS6D01G037600.1	Wheat	mitochondrion	22.14	50.0
Solyc10g018500.1.1	Tomato	extracellular	50.38	49.81
CDY14888	Canola	extracellular	50.0	49.43
CDX96901	Canola	extracellular	50.0	49.43
Bra035987.1-P	Field mustard	extracellular	50.0	49.43
CDX74711	Canola	extracellular	49.24	49.43
AT1G65681.1	Thale cress	cytosol	41.6	48.88
Solyc03g093390.2.1	Tomato	extracellular, nucleus	52.67	48.42
TraesCS6D01G037700.1	Wheat	extracellular	50.0	47.99
CDY18946	Canola	extracellular	48.47	47.74
TraesCS1D01G215400.1	Wheat	extracellular	48.09	47.73
TraesCS1D01G215300.1	Wheat	extracellular	49.62	47.45
TraesCS6D01G037500.1	Wheat	extracellular	49.24	47.25
TraesCS3D01G000400.1	Wheat	cytosol	35.88	46.31
Bra004890.1-P	Field mustard	extracellular	55.73	45.91
TraesCS3D01G000500.1	Wheat	extracellular	47.71	45.62
Solyc01g090820.1.1	Tomato	extracellular	44.66	45.53
TraesCS1D01G211500.1	Wheat	extracellular	45.42	44.91
CDX95627	Canola	extracellular	47.71	44.8
PGSC0003DMT400030395	Potato	cytosol, extracellular, mitochondrion, nucleus	22.14	44.62
Solyc05g052330.1.1	Tomato	extracellular	44.66	43.66
CDX74713	Canola	extracellular	55.73	42.57
TraesCS4D01G361900.1	Wheat	extracellular	48.09	42.42
Solyc07g049540.1.1	Tomato	extracellular	41.6	42.41
TraesCS2D01G459300.1	Wheat	extracellular	42.37	41.89
TraesCS3D01G476800.1	Wheat	extracellular	30.92	41.75
TraesCS6D01G198400.1	Wheat	extracellular	47.33	41.47
TraesCS3D01G476700.1	Wheat	extracellular	48.09	41.04
AT3G60570.1	Thale cress	extracellular	41.22	40.91
TraesCS3D01G474800.1	Wheat	extracellular	48.85	40.76
TraesCS4D01G355800.1	Wheat	extracellular	41.6	40.37
TraesCS4D01G355100.1	Wheat	extracellular	41.6	40.37
TraesCS4D01G361700.1	Wheat	extracellular	48.09	39.87
CDY71186	Canola	extracellular	41.22	39.85
Bra003421.1-P	Field mustard	extracellular	40.46	39.85
CDX67835	Canola	extracellular	40.46	39.85
PGSC0003DMT400095086	Potato	plastid	37.79	39.6
TraesCS1D01G215200.1	Wheat	extracellular, mitochondrion, nucleus, plastid	46.95	39.17
TraesCS1D01G215500.1	Wheat	extracellular	46.95	39.05
TraesCS4D01G355700.1	Wheat	extracellular	39.69	38.81
TraesCS6D01G218500.1	Wheat	extracellular	39.69	38.81
TraesCS1D01G215100.1	Wheat	plastid	41.6	38.52
Bra004891.1-P	Field mustard	cytosol, nucleus, plastid	20.23	38.41
TraesCS5D01G086000.1	Wheat	extracellular, plasma membrane	49.24	37.18
TraesCS2D01G369200.2	Wheat	extracellular	37.4	35.13
Bra014484.1-P	Field mustard	extracellular	43.51	31.67
CDY48362	Canola	extracellular	43.13	31.65
PGSC0003DMT400066943	Potato	cytosol, plastid, vacuole	55.34	31.59
TraesCS4D01G324000.1	Wheat	extracellular	30.92	29.67
TraesCS4D01G323600.1	Wheat	extracellular	30.53	28.88
TraesCS4D01G323900.1	Wheat	golgi	29.39	28.41
TraesCS1D01G206700.1	Wheat	extracellular	30.15	27.92
TraesCS4D01G323800.2	Wheat	extracellular	30.53	26.49
TraesCS7D01G532400.1	Wheat	extracellular	25.19	21.43
TraesCS7D01G532200.1	Wheat	extracellular	25.19	21.36
TraesCS7D01G532500.1	Wheat	extracellular	24.05	19.63

Protein Annotations

Gene3D:2.40.40.10	Gene3D:2.60.40.760	MapMan:35.1	InterPro:Expan_Lol_pI	InterPro:Expansin/allergen_DPBB_dom	InterPro:Expansin_CBD
InterPro:Expansin_CBD_sf	GO:GO:0000003	GO:GO:0005575	GO:GO:0005576	GO:GO:0008150	GO:GO:0019953
InterPro:IPR007112	InterPro:IPR007117	InterPro:IPR036749	InterPro:IPR036908	InterPro:LolPI	PFAM:PF01357
PFAM:PF03330	PRINTS:PR00829	PRINTS:PR01225	PFscan:PS50842	PFscan:PS50843	PANTHER:PTHR31692
PANTHER:PTHR31692:SF52	InterPro:RlpA-like_DPBB	InterPro:RlpA-like_sf	SMART:SM00837	SUPFAM:SSF49590	SUPFAM:SSF50685
SignalP:SignalP-noTM	TMHMM:TMhelix	EnsemblPlantsGene:TraesCS2D01G411000	EnsemblPlants:TraesCS2D01G411000.1	SEG:seg	:

Description

No Description!

Coordinates

chr2D:+:526111549..526112896

Molecular Weight (calculated)

26874.9 Da

IEP (calculated)

7.655

GRAVY (calculated)

0.200

Length

262 amino acids

Sequence
(BLAST)

001: MASKLQLLPS FIAIVVLAAV IHPCASVEFH RKLASWSNAG ATWYGAANGA GSDGGACGYK GAVDQSPFSS MIAAGGPSLY ASGLGCGSCY QVKCTGNAAC
101: SSSPVTVVIT DQCPGGPCLE EPHFDLSGTA FGAMAKPGQA DQLRAAGVLQ IQFTRVQCNW AGVKLTFVVD AGSNPNYFAV LIQYQNGDGD LSAVDLMQSG
201: AAAAWAPMQH SWGAVWKLDA GSALQAPLSL RLTSSSGKKL VASNVIPLGW KAGSAYQSTV NY

Best Arabidopsis Sequence Match ( AT1G65680.1 )
(BLAST)

001: MTILVVDRYY MLMNLLFALT CLLLNLTHCF SPKKFNISAA TTSDSDWSIA GSTWYGNPTG YGSDGGACGY GNAVAQPPFS KMVSAGGPSL FKSGKGCGAC
101: YQVKCTSKSA CSKNPVTVVI TDECPGCVKE SVHFDLSGTA FGAMAISGQD SQLRNVGELQ ILYKKVECNY IGKTVTFQVD KGSNANSFAV LVAYVNGDGE
201: IGRIELKQAL DSDKWLSMSQ SWGAVWKLDV SSPLRAPLSL RVTSLESGKT VVASNVIPAN WQPGAIYKSN VNF

Arabidopsis Description

EXPB2Putative expansin-B2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SHY6]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.