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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular

Predictor Summary:
  • extracellular 10
  • endoplasmic reticulum 5
  • vacuole 5
  • plasma membrane 5
  • golgi 5
Predictors GFP MS/MS Papers
Winner Takes All:extracellular
Any Predictor:secretory
BaCelLo:secretory
EpiLoc:extracellular
iPSORT:secretory
MultiLoc:extracellular
Plant-mPloc:extracellular
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:extracellular
YLoc:extracellular
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra000370.1-P Field mustard extracellular 100.0 100.0
CDX95627 Canola extracellular 90.35 83.87
CDY72345 Canola cytosol 76.83 81.56
AT2G45110.1 Thale cress extracellular 80.69 80.69
CDX74711 Canola extracellular 80.69 80.08
CDY72505 Canola cytosol 49.42 80.0
CDY18950 Canola cytosol, extracellular, plastid 72.97 79.75
CDY18946 Canola extracellular 79.92 77.82
CDX96901 Canola extracellular 78.76 76.98
CDY72655 Canola cytosol, plastid 50.19 76.92
CDY14888 Canola extracellular 77.99 76.23
AT1G65681.1 Thale cress cytosol 62.55 72.65
TraesCSU01G009600.1 Wheat extracellular 54.83 56.13
TraesCS2D01G078800.1 Wheat extracellular 53.67 54.72
TraesCS2D01G592900.1 Wheat extracellular 52.51 54.62
TraesCS2B01G607400.1 Wheat extracellular 52.51 54.62
HORVU2Hr1G013360.1 Barley extracellular 52.51 54.18
TraesCS2B01G095600.1 Wheat extracellular 53.28 54.12
TraesCS2A01G081200.1 Wheat extracellular 52.9 53.94
TraesCS2A01G580300.1 Wheat extracellular 51.74 53.82
HORVU2Hr1G013380.1 Barley cytosol, extracellular, mitochondrion 49.03 53.59
TraesCS2D01G078900.1 Wheat extracellular 52.51 53.54
TraesCS2A01G580200.1 Wheat extracellular 51.74 53.39
TraesCS2B01G095700.1 Wheat extracellular 51.74 53.17
TraesCS2D01G104800.1 Wheat extracellular 52.12 53.15
TraesCS2A01G105200.1 Wheat extracellular 52.12 53.15
TraesCS2A01G080800.1 Wheat extracellular 50.58 51.57
HORVU0Hr1G016380.2 Barley extracellular 52.51 51.32
Zm00001d051368_P001 Maize extracellular 31.27 51.27
TraesCS2B01G122100.1 Wheat extracellular 37.45 50.79
EES07509 Sorghum extracellular 51.74 50.76
TraesCS2D01G078600.1 Wheat extracellular 46.72 50.63
TraesCS2A01G413600.1 Wheat extracellular 50.97 50.38
TraesCS2B01G432300.1 Wheat plastid 50.97 50.38
CDX67835 Canola extracellular 51.74 50.38
Zm00001d017493_P001 Maize extracellular 51.74 50.19
Os04t0552000-00 Rice extracellular 50.97 50.0
CDY71186 Canola extracellular 52.12 49.82
TraesCS2D01G411000.1 Wheat extracellular 50.19 49.62
GSMUA_Achr2P13750_001 Banana extracellular 49.81 49.43
TraesCS6A01G249700.1 Wheat extracellular 50.58 49.25
Zm00001d045861_P001 Maize mitochondrion 50.19 49.06
EES11234 Sorghum extracellular 49.81 49.05
KXG19818 Sorghum extracellular 49.03 49.03
GSMUA_Achr2P13730_001 Banana extracellular 49.42 48.85
GSMUA_Achr2P13740_001 Banana extracellular 49.42 48.85
TraesCS6A01G249400.2 Wheat extracellular 49.81 48.68
EER88254 Sorghum extracellular 48.65 48.65
TraesCS6D01G231400.1 Wheat extracellular 49.81 48.5
Zm00001d026170_P001 Maize extracellular 49.03 48.47
Zm00001d045792_P001 Maize extracellular 50.19 48.15
Os05t0246300-01 Rice extracellular 48.26 47.35
Os02t0658600-00 Rice plastid 49.42 46.89
Solyc10g018500.1.1 Tomato extracellular 47.49 46.42
HORVU2Hr1G097480.1 Barley extracellular 50.58 46.29
Solyc01g090820.1.1 Tomato extracellular 45.56 45.91
CDY18948 Canola extracellular 34.36 45.64
HORVU2Hr1G013340.1 Barley extracellular 50.19 44.52
CDY18951 Canola extracellular 47.1 44.36
CDY70406 Canola extracellular 46.33 43.8
CDX74710 Canola extracellular 45.95 43.43
GSMUA_AchrUn_... Banana extracellular 29.73 42.78
PGSC0003DMT400030395 Potato cytosol, extracellular, mitochondrion, nucleus 20.85 41.54
CDY18990 Canola extracellular 42.47 41.51
Solyc05g052330.1.1 Tomato extracellular 42.47 41.04
Solyc07g049540.1.1 Tomato extracellular 40.54 40.86
CDY05789 Canola extracellular 40.54 39.62
CDY31940 Canola extracellular 40.15 39.25
CDY70556 Canola extracellular 40.15 39.25
PGSC0003DMT400095086 Potato plastid 37.84 39.2
CDY58728 Canola extracellular 39.77 38.87
TraesCS5B01G376500.1 Wheat extracellular 45.95 38.51
TraesCS5D01G384200.1 Wheat extracellular 45.56 38.31
KXG37946 Sorghum extracellular 47.1 37.54
EER93754 Sorghum extracellular 43.63 36.93
Os03t0645000-00 Rice mitochondrion 43.63 36.1
CDY48362 Canola extracellular 48.65 35.29
CDX74713 Canola extracellular 45.95 34.69
CDY09659 Canola plasma membrane 28.57 29.6
CDY65447 Canola extracellular 28.57 29.6
CDY42954 Canola extracellular 28.19 29.2
CDY35606 Canola extracellular 27.8 28.8
HORVU5Hr1G092910.9 Barley plastid 45.56 28.5
CDX90493 Canola cytosol, extracellular, nucleus 13.9 27.48
CDY69288 Canola extracellular 25.48 25.0
CDY52801 Canola extracellular 25.48 24.54
CDY61895 Canola extracellular 25.1 24.16
CDY72634 Canola extracellular 24.71 24.15
CDY64278 Canola extracellular 24.71 24.15
Zm00001d033231_P003 Maize extracellular 42.86 15.55
Protein Annotations
Gene3D:2.40.40.10Gene3D:2.60.40.760MapMan:35.1GO:A0A078D508EnsemblPlants:CDX83404ProteinID:CDX83404
ProteinID:CDX83404.1InterPro:Expan_Lol_pIInterPro:Expansin/allergen_DPBB_domInterPro:Expansin_CBDInterPro:Expansin_CBD_sfGO:GO:0000003
GO:GO:0005575GO:GO:0005576GO:GO:0008150GO:GO:0019953EnsemblPlantsGene:GSBRNA2T00138974001InterPro:IPR007112
InterPro:IPR007117InterPro:IPR036749InterPro:IPR036908InterPro:LolPIPFAM:PF01357PFAM:PF03330
PRINTS:PR00829PRINTS:PR01225PFscan:PS50842PFscan:PS50843PANTHER:PTHR31692PANTHER:PTHR31692:SF3
InterPro:RlpA-like_DPBBInterPro:RlpA-like_sfSMART:SM00837SUPFAM:SSF49590SUPFAM:SSF50685SignalP:SignalP-noTM
UniParc:UPI000253FE33SEG:seg::::
Description
BnaA03g21020D
Coordinates
chrLK031832:-:1417052..1418503
Molecular Weight (calculated)
27048.3 Da
IEP (calculated)
7.828
GRAVY (calculated)
0.134
Length
259 amino acids
Sequence
(BLAST)
001: MASSSHIYIA LLALFAVSLK CCYCQNETLA AGWGNAGVTW YGEPEGAGST GGACGYGMVV ANPPLYAMVS AGGPSLFNNG QGCGTCYQIV CTGTAACSGR
101: PITVTITDEC PGGPCASEPF HFDLSGKAIG ALAKPGQAGS LRAAGVLRVS YRRAPCLYRG TNIAFHVDAG ATPFYMAFVV EYENGDGDLA SVEIQPAGGG
201: FIAMQEMRSA LWKVNSGSAL RGPFNIRLTS RESRKVVVAQ GVIPANWRAD QTYRSIINF
Best Arabidopsis Sequence Match ( AT2G45110.1 )
(BLAST)
001: MASSQRYFAL LALFAVSLKF CYCQNETIDV AGSGTAGVTW YGEPFGAGST GGACGYGSAV ANPPLYAMVS AGGPSLFNNG KGCGTCYQVV CIGHPACSGS
101: PITVTITDEC PGGPCASEPV HIDLSGKAMG ALAKPGQADQ LRSAGVIRVN YKRAACLYRG TNIVFRMDAG ANPYYISFVV EYENGDGDLS NVEIQPAGGS
201: FISMQEMRSA VWKVNSGSAL RGPFNIRLTS GESHKVIVAY NVIPANWKPD ESYRSIVNF
Arabidopsis Description
EXPB4Expansin-B4 [Source:UniProtKB/Swiss-Prot;Acc:Q9SHD1]
SUBAcon: [extracellular]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.