CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 8
endoplasmic reticulum 5
vacuole 5
plasma membrane 6
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra012684.1-P	Field mustard	extracellular	100.0	100.0
CDX90493	Canola	cytosol, extracellular, nucleus	51.6	98.47
CDY09659	Canola	plasma membrane	96.4	96.4
CDY35606	Canola	extracellular	90.8	90.8
CDY42954	Canola	extracellular	90.4	90.4
AT4G17030.1	Thale cress	extracellular	88.4	88.4
KRH04222	Soybean	extracellular	62.0	61.75
KRH77296	Soybean	extracellular	61.2	60.96
KRH57515	Soybean	extracellular	60.4	60.16
KRH28194	Soybean	extracellular	60.0	59.76
VIT_00s1455g00010.t01	Wine grape	extracellular	54.4	54.18
VIT_00s0309g00050.t01	Wine grape	extracellular	52.4	52.19
VIT_00s0309g00090.t01	Wine grape	extracellular	51.6	51.39
Solyc08g077900.2.1	Tomato	extracellular	52.0	51.38
KRH04218	Soybean	extracellular	50.8	50.8
KRH04215	Soybean	nucleus	50.8	50.8
PGSC0003DMT400067456	Potato	extracellular	51.2	50.59
PGSC0003DMT400068379	Potato	mitochondrion	44.8	49.78
Solyc06g060970.1.1	Tomato	extracellular	48.4	48.79
KRH57508	Soybean	endoplasmic reticulum	47.2	48.36
KRH04220	Soybean	endoplasmic reticulum	47.2	47.58
KRH04221	Soybean	extracellular	46.8	47.37
KRH57512	Soybean	extracellular	46.0	46.56
PGSC0003DMT400067458	Potato	extracellular	44.8	44.62
PGSC0003DMT400067459	Potato	extracellular	42.8	42.63
Solyc08g077910.2.1	Tomato	extracellular	42.4	42.23
CDY69288	Canola	extracellular	35.2	33.33
CDY64278	Canola	extracellular	34.8	32.83
CDY72634	Canola	extracellular	34.8	32.83
CDY52801	Canola	extracellular	35.2	32.71
CDY61895	Canola	extracellular	35.2	32.71
CDY18951	Canola	extracellular	34.8	31.64
CDY70406	Canola	extracellular	34.4	31.39
CDY18948	Canola	extracellular	24.0	30.77
CDX74710	Canola	extracellular	33.6	30.66
CDY72345	Canola	cytosol	28.8	29.51
CDY18990	Canola	extracellular	30.4	28.68
CDX83404	Canola	extracellular	29.6	28.57
CDX74711	Canola	extracellular	29.6	28.35
CDY14888	Canola	extracellular	30.0	28.3
CDY70556	Canola	extracellular	30.0	28.3
CDY05789	Canola	extracellular	30.0	28.3
CDY58728	Canola	extracellular	29.6	27.92
CDY31940	Canola	extracellular	29.6	27.92
CDY18950	Canola	cytosol, extracellular, plastid	26.4	27.85
CDX96901	Canola	extracellular	29.2	27.55
CDY72655	Canola	cytosol, plastid	18.4	27.22
CDY18946	Canola	extracellular	28.8	27.07
CDY72505	Canola	cytosol	16.4	25.62
CDX74713	Canola	extracellular	33.6	24.49
CDX95627	Canola	extracellular	26.4	23.66
CDY71186	Canola	extracellular	25.2	23.25
CDX67835	Canola	extracellular	24.4	22.93
CDY48362	Canola	extracellular	25.2	17.65

Protein Annotations

Gene3D:2.40.40.10	Gene3D:2.60.40.760	MapMan:21.4.2.4	GO:A0A078JJB9	UniProt:A0A078JJB9	EnsemblPlants:CDY65447
ProteinID:CDY65447	ProteinID:CDY65447.1	InterPro:Expan_Lol_pI	InterPro:Expansin/allergen_DPBB_dom	InterPro:Expansin_CBD	InterPro:Expansin_CBD_sf
GO:GO:0000003	GO:GO:0005575	GO:GO:0005576	GO:GO:0008150	GO:GO:0019953	EnsemblPlantsGene:GSBRNA2T00046620001
InterPro:IPR007112	InterPro:IPR007117	InterPro:IPR036749	InterPro:IPR036908	InterPro:LolPI	PFAM:PF01357
PFAM:PF03330	PRINTS:PR00829	PRINTS:PR01225	PFscan:PS50842	PFscan:PS50843	PANTHER:PTHR31692
PANTHER:PTHR31692:SF10	InterPro:RlpA-like_DPBB	InterPro:RlpA-like_sf	SMART:SM00837	SUPFAM:SSF49590	SUPFAM:SSF50685
SignalP:SignalP-noTM	TMHMM:TMhelix	UniParc:UPI0002540933	SEG:seg	:	:

Description

BnaA03g58070DBnaA03g58070D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JJB9]

Coordinates

chrLK034794:+:1295..4240

Molecular Weight (calculated)

27877.2 Da

IEP (calculated)

6.969

GRAVY (calculated)

-0.153

Length

250 amino acids

Sequence
(BLAST)

001: MKKSHVLLLL LVQVIVLLPL LCLSDDFVSS RATYYGSPDC KGNSRGACGY GEFGRDINDG EVSGVSSRLW KNGAGCGACY QVRCKIPPHC NEEGVYVVAT
101: DYGEGDGTDF IFSPKAYGRM ARPGTEFQLY SFGVVDVEYQ RVPCRYGGYN LVYKIHEKSY NPHYLAVLIL YVGGVNDILA VEFWQEDCKE WKRMRRVFGA
201: VHDYQNPPRG TLSLRFLVYG SAGLNWVESQ NALPADWTAG ATYNSNILLT

Best Arabidopsis Sequence Match ( AT4G17030.1 )
(BLAST)

001: MKHSHVLLLL FVQVIVLLPL LCLSDDFVNS RATYYGSPDC KANPRGHCGY GEFGRDINNG EVSGVSWRLW NNGTGCGACY QVRCKIPPHC SEEGVYVVAT
101: DSGEGDGTDF ILSPKAYGRM ARPGTENQLY SFGVVNVEYQ RIPCRYAGYN LVYKIHEKSY NPHYLAILVL YVGGVNDILA VEVWQEDCKE WRRMRRVFGA
201: VHDLQNPPRG TLTLRFLVYG SAGINWIQSP NAIPADWTAG ATYDSNILLT

Arabidopsis Description

EXLB1Expansin-like protein [Source:UniProtKB/TrEMBL;Acc:Q0WRS3]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.