Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- extracellular 9
- endoplasmic reticulum 5
- vacuole 5
- plasma membrane 5
- golgi 5
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400068379 | Potato | mitochondrion | 81.85 | 90.22 |
| Solyc08g077910.2.1 | Tomato | extracellular | 57.66 | 56.97 |
| Solyc08g077900.2.1 | Tomato | extracellular | 52.82 | 51.78 |
| CDX90493 | Canola | cytosol, extracellular, nucleus | 26.21 | 49.62 |
| Bra012687.1-P | Field mustard | extracellular | 50.0 | 49.6 |
| KRH77296 | Soybean | extracellular | 50.0 | 49.4 |
| CDY09659 | Canola | plasma membrane | 49.19 | 48.8 |
| VIT_00s1455g00010.t01 | Wine grape | extracellular | 49.19 | 48.61 |
| KRH28194 | Soybean | extracellular | 49.19 | 48.61 |
| Bra012684.1-P | Field mustard | extracellular | 48.79 | 48.4 |
| CDY65447 | Canola | extracellular | 48.79 | 48.4 |
| AT4G17030.1 | Thale cress | extracellular | 48.79 | 48.4 |
| Bra040107.1-P | Field mustard | extracellular | 48.79 | 48.4 |
| KRH04222 | Soybean | extracellular | 48.79 | 48.21 |
| CDY42954 | Canola | extracellular | 48.39 | 48.0 |
| CDY35606 | Canola | extracellular | 48.39 | 48.0 |
| KRH57515 | Soybean | extracellular | 47.98 | 47.41 |
| VIT_00s0309g00050.t01 | Wine grape | extracellular | 47.58 | 47.01 |
| VIT_00s0309g00090.t01 | Wine grape | extracellular | 47.18 | 46.61 |
| KRH57508 | Soybean | endoplasmic reticulum | 42.74 | 43.44 |
| KRH04218 | Soybean | extracellular | 43.55 | 43.2 |
| KRH04215 | Soybean | nucleus | 43.55 | 43.2 |
| KRH57512 | Soybean | extracellular | 42.34 | 42.51 |
| KRH04221 | Soybean | extracellular | 41.94 | 42.11 |
| KRH04220 | Soybean | endoplasmic reticulum | 39.92 | 39.92 |
| Solyc08g077330.2.1 | Tomato | extracellular | 40.73 | 39.61 |
| Solyc01g112000.2.1 | Tomato | extracellular | 39.52 | 37.55 |
| Solyc07g054170.2.1 | Tomato | extracellular | 30.65 | 28.46 |
| Solyc01g090820.1.1 | Tomato | extracellular | 28.63 | 27.63 |
| Solyc05g052330.1.1 | Tomato | extracellular | 29.44 | 27.24 |
| Solyc01g090810.2.1 | Tomato | extracellular | 29.84 | 26.91 |
| Solyc10g008440.2.1 | Tomato | extracellular | 28.23 | 26.72 |
| Solyc10g018500.1.1 | Tomato | extracellular | 28.23 | 26.42 |
| Solyc03g093390.2.1 | Tomato | extracellular, nucleus | 30.24 | 26.32 |
| Solyc07g049540.1.1 | Tomato | extracellular | 27.02 | 26.07 |
Protein Annotations
| Gene3D:2.40.40.10 | Gene3D:2.60.40.760 | MapMan:21.4.2.4 | InterPro:Expan_Lol_pI | InterPro:Expansin/allergen_DPBB_dom | InterPro:Expansin_CBD |
| InterPro:Expansin_CBD_sf | GO:GO:0005575 | GO:GO:0005576 | InterPro:IPR007112 | InterPro:IPR007117 | InterPro:IPR036749 |
| InterPro:IPR036908 | UniProt:K4C6S7 | PFAM:PF01357 | PFAM:PF03330 | PRINTS:PR01225 | PFscan:PS50842 |
| PFscan:PS50843 | PANTHER:PTHR31692 | PANTHER:PTHR31692:SF10 | InterPro:RlpA-like_DPBB | InterPro:RlpA-like_sf | SUPFAM:SSF49590 |
| SUPFAM:SSF50685 | SignalP:SignalP-noTM | EnsemblPlantsGene:Solyc06g060970.1 | EnsemblPlants:Solyc06g060970.1.1 | UniParc:UPI000276656C | SEG:seg |
Description
No Description!
Coordinates
chr6:-:38948213..38950042
Molecular Weight (calculated)
27156.2 Da
IEP (calculated)
6.350
GRAVY (calculated)
-0.282
Length
248 amino acids
Sequence
(BLAST)
(BLAST)
001: MDSLKNTFIF IVLLLPTLCY SNNYVSTVSY YTTPDGMGTP SGACGYGDYG KDVNSGDVCT TSKRLYKNGA ACGACYQVRC KDKEMCSDEG TKVVVTDNGE
101: GHGTDFILSS RAYAKMAKQP NMAQHLFAKG VVEVEYRRVS CKYGGGNLMV KVNEHSKHPN YLAIVVMNQG GATDIHSVEV FEEETKEWIS MRRAYGAVFD
201: LSNPPSGELK VRFLTSAGAE TKWVESDKAV IPAEWKAGIT IETDIQLS
101: GHGTDFILSS RAYAKMAKQP NMAQHLFAKG VVEVEYRRVS CKYGGGNLMV KVNEHSKHPN YLAIVVMNQG GATDIHSVEV FEEETKEWIS MRRAYGAVFD
201: LSNPPSGELK VRFLTSAGAE TKWVESDKAV IPAEWKAGIT IETDIQLS
001: MKHSHVLLLL FVQVIVLLPL LCLSDDFVNS RATYYGSPDC KANPRGHCGY GEFGRDINNG EVSGVSWRLW NNGTGCGACY QVRCKIPPHC SEEGVYVVAT
101: DSGEGDGTDF ILSPKAYGRM ARPGTENQLY SFGVVNVEYQ RIPCRYAGYN LVYKIHEKSY NPHYLAILVL YVGGVNDILA VEVWQEDCKE WRRMRRVFGA
201: VHDLQNPPRG TLTLRFLVYG SAGINWIQSP NAIPADWTAG ATYDSNILLT
101: DSGEGDGTDF ILSPKAYGRM ARPGTENQLY SFGVVNVEYQ RIPCRYAGYN LVYKIHEKSY NPHYLAILVL YVGGVNDILA VEVWQEDCKE WRRMRRVFGA
201: VHDLQNPPRG TLTLRFLVYG SAGINWIQSP NAIPADWTAG ATYDSNILLT
Arabidopsis Description
EXLB1Expansin-like protein [Source:UniProtKB/TrEMBL;Acc:Q0WRS3]
SUBAcon: [extracellular]
SUBAcon: [extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.