Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- extracellular 9
- endoplasmic reticulum 5
- vacuole 5
- plasma membrane 5
- golgi 5
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400067459 | Potato | extracellular | 97.21 | 97.21 |
| Solyc06g060970.1.1 | Tomato | extracellular | 56.97 | 57.66 |
| VIT_00s1455g00010.t01 | Wine grape | extracellular | 46.61 | 46.61 |
| VIT_00s0309g00090.t01 | Wine grape | extracellular | 46.61 | 46.61 |
| KRH57508 | Soybean | endoplasmic reticulum | 44.62 | 45.9 |
| Solyc08g077900.2.1 | Tomato | extracellular | 46.22 | 45.85 |
| VIT_00s0309g00050.t01 | Wine grape | extracellular | 45.42 | 45.42 |
| KRH04215 | Soybean | nucleus | 45.02 | 45.2 |
| KRH04218 | Soybean | extracellular | 45.02 | 45.2 |
| KRH04221 | Soybean | extracellular | 43.43 | 44.13 |
| AT4G17030.1 | Thale cress | extracellular | 43.43 | 43.6 |
| KRH28194 | Soybean | extracellular | 43.43 | 43.43 |
| KRH57512 | Soybean | extracellular | 42.63 | 43.32 |
| Bra012687.1-P | Field mustard | extracellular | 43.03 | 43.2 |
| KRH04220 | Soybean | endoplasmic reticulum | 42.63 | 43.15 |
| CDY09659 | Canola | plasma membrane | 42.63 | 42.8 |
| Bra040107.1-P | Field mustard | extracellular | 42.63 | 42.8 |
| KRH77296 | Soybean | extracellular | 42.63 | 42.63 |
| Bra012684.1-P | Field mustard | extracellular | 42.23 | 42.4 |
| CDY65447 | Canola | extracellular | 42.23 | 42.4 |
| CDY42954 | Canola | extracellular | 42.23 | 42.4 |
| CDY35606 | Canola | extracellular | 42.23 | 42.4 |
| KRH04222 | Soybean | extracellular | 41.83 | 41.83 |
| KRH57515 | Soybean | extracellular | 41.43 | 41.43 |
| Solyc08g077330.2.1 | Tomato | extracellular | 40.24 | 39.61 |
| CDX90493 | Canola | cytosol, extracellular, nucleus | 19.92 | 38.17 |
| Solyc01g112000.2.1 | Tomato | extracellular | 36.26 | 34.87 |
| Solyc10g018500.1.1 | Tomato | extracellular | 31.08 | 29.43 |
| Solyc07g049540.1.1 | Tomato | extracellular | 29.88 | 29.18 |
| Solyc05g052330.1.1 | Tomato | extracellular | 31.08 | 29.1 |
| Solyc01g090810.2.1 | Tomato | extracellular | 31.08 | 28.36 |
| Solyc01g090820.1.1 | Tomato | extracellular | 28.29 | 27.63 |
| Solyc03g093390.2.1 | Tomato | extracellular, nucleus | 31.08 | 27.37 |
| Solyc07g054170.2.1 | Tomato | extracellular | 27.89 | 26.22 |
| Solyc10g008440.2.1 | Tomato | extracellular | 27.09 | 25.95 |
Protein Annotations
| Gene3D:2.40.40.10 | Gene3D:2.60.40.760 | MapMan:21.4.2.4 | InterPro:Expan_Lol_pI | InterPro:Expansin/allergen_DPBB_dom | InterPro:Expansin_CBD |
| InterPro:Expansin_CBD_sf | GO:GO:0005575 | GO:GO:0005576 | InterPro:IPR007112 | InterPro:IPR007117 | InterPro:IPR036749 |
| InterPro:IPR036908 | UniProt:K4CNF0 | PFAM:PF01357 | PFAM:PF03330 | PRINTS:PR01225 | PFscan:PS50842 |
| PFscan:PS50843 | PANTHER:PTHR31692 | PANTHER:PTHR31692:SF10 | InterPro:RlpA-like_DPBB | InterPro:RlpA-like_sf | SMART:SM00837 |
| SUPFAM:SSF49590 | SUPFAM:SSF50685 | SignalP:SignalP-noTM | EnsemblPlantsGene:Solyc08g077910.2 | EnsemblPlants:Solyc08g077910.2.1 | TMHMM:TMhelix |
| UniParc:UPI000276C8A4 | : | : | : | : | : |
Description
No Description!
Coordinates
chr8:+:61812783..61815044
Molecular Weight (calculated)
27966.6 Da
IEP (calculated)
8.511
GRAVY (calculated)
-0.225
Length
251 amino acids
Sequence
(BLAST)
(BLAST)
001: MAISFNNCST FMICIILLLP TFSFGTENYY SKATFYKTSD GKGTPTGACG YGEHGRYVND GLVTAASWKL YKNGVGCGAC YQVRCKDEAL CSNEGVKVLV
101: TDSGEGPGTD FILSSDAFAK MAKHPKLAHM LFPKGVVDVD YKRVSCKYGN LKIKINEHSN YHGYLAIFLF NNGGYADIIA IEIYDVKTYK WIPMRRSYGA
201: VFDLANPPKG DLKLRIQIKE GEKTKWINSD KTVIPDYWKP GSIYETDVQI P
101: TDSGEGPGTD FILSSDAFAK MAKHPKLAHM LFPKGVVDVD YKRVSCKYGN LKIKINEHSN YHGYLAIFLF NNGGYADIIA IEIYDVKTYK WIPMRRSYGA
201: VFDLANPPKG DLKLRIQIKE GEKTKWINSD KTVIPDYWKP GSIYETDVQI P
001: MKHSHVLLLL FVQVIVLLPL LCLSDDFVNS RATYYGSPDC KANPRGHCGY GEFGRDINNG EVSGVSWRLW NNGTGCGACY QVRCKIPPHC SEEGVYVVAT
101: DSGEGDGTDF ILSPKAYGRM ARPGTENQLY SFGVVNVEYQ RIPCRYAGYN LVYKIHEKSY NPHYLAILVL YVGGVNDILA VEVWQEDCKE WRRMRRVFGA
201: VHDLQNPPRG TLTLRFLVYG SAGINWIQSP NAIPADWTAG ATYDSNILLT
101: DSGEGDGTDF ILSPKAYGRM ARPGTENQLY SFGVVNVEYQ RIPCRYAGYN LVYKIHEKSY NPHYLAILVL YVGGVNDILA VEVWQEDCKE WRRMRRVFGA
201: VHDLQNPPRG TLTLRFLVYG SAGINWIQSP NAIPADWTAG ATYDSNILLT
Arabidopsis Description
EXLB1Expansin-like protein [Source:UniProtKB/TrEMBL;Acc:Q0WRS3]
SUBAcon: [extracellular]
SUBAcon: [extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.