CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum

Predictor Summary:

extracellular 8
endoplasmic reticulum 5
vacuole 5
plasma membrane 5
golgi 5
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum
Any Predictor:	plastid, secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	extracellular

endoplasmic reticulum: 27224218

msms PMID: 27224218 doi

X Wang, S Komatsu

Graduate School of Life and Environmental Sciences, University of Tsukuba , Tsukuba 305-8572, Japan., National Institute of Crop Science, National Agriculture and Food Research Organization , Tsukuba 305-8518, Japan.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH57508	Soybean	endoplasmic reticulum	89.11	90.57
KRH57512	Soybean	extracellular	72.58	72.87
KRH04221	Soybean	extracellular	71.77	72.06
KRH04215	Soybean	nucleus	66.13	65.6
KRH04218	Soybean	extracellular	66.13	65.6
KRH04222	Soybean	extracellular	61.69	60.96
KRH57515	Soybean	extracellular	60.48	59.76
KRH77296	Soybean	extracellular	55.65	54.98
KRH28194	Soybean	extracellular	55.65	54.98
VIT_00s0309g00090.t01	Wine grape	extracellular	51.21	50.6
VIT_00s1455g00010.t01	Wine grape	extracellular	50.81	50.2
VIT_00s0309g00050.t01	Wine grape	extracellular	50.4	49.8
Bra012684.1-P	Field mustard	extracellular	47.58	47.2
Bra012687.1-P	Field mustard	extracellular	47.58	47.2
CDY65447	Canola	extracellular	47.58	47.2
Bra040107.1-P	Field mustard	extracellular	47.18	46.8
CDY09659	Canola	plasma membrane	46.77	46.4
CDY35606	Canola	extracellular	46.77	46.4
CDY42954	Canola	extracellular	46.77	46.4
AT4G17030.1	Thale cress	extracellular	45.56	45.2
Solyc08g077910.2.1	Tomato	extracellular	43.15	42.63
PGSC0003DMT400067459	Potato	extracellular	42.74	42.23
Solyc08g077900.2.1	Tomato	extracellular	42.34	41.5
PGSC0003DMT400067456	Potato	extracellular	42.34	41.5
KRH57566	Soybean	extracellular	40.73	40.4
KRH77254	Soybean	extracellular	41.53	40.39
Solyc06g060970.1.1	Tomato	extracellular	39.92	39.92
KRH04284	Soybean	extracellular	40.32	39.84
PGSC0003DMT400068379	Potato	mitochondrion	35.08	38.67
PGSC0003DMT400067458	Potato	extracellular	39.11	38.65
KRH28238	Soybean	extracellular	39.52	38.43
CDX90493	Canola	cytosol, extracellular, nucleus	20.16	38.17
KRH76358	Soybean	extracellular, plasma membrane, vacuole	32.66	37.16
KRH29091	Soybean	extracellular	32.66	31.27
KRH24119	Soybean	extracellular	32.66	31.03
KRH33426	Soybean	extracellular	32.66	29.78
KRH22402	Soybean	extracellular	29.44	28.29
KRG88934	Soybean	extracellular, vacuole	31.05	27.8
KRH26935	Soybean	extracellular	29.03	27.59
KRH33423	Soybean	extracellular	30.24	27.08
KRH75302	Soybean	extracellular	29.44	26.35
KRH25552	Soybean	extracellular	27.02	25.09
KRH55988	Soybean	extracellular	26.61	24.72
KRH65410	Soybean	extracellular	25.81	23.97

Protein Annotations

EntrezGene:100778424	Gene3D:2.40.40.10	Gene3D:2.60.40.760	MapMan:21.4.2.4	EMBL:ACUP02010392	InterPro:Expan_Lol_pI
InterPro:Expansin/allergen_DPBB_dom	InterPro:Expansin_CBD	InterPro:Expansin_CBD_sf	EnsemblPlantsGene:GLYMA_17G147400	GO:GO:0005575	GO:GO:0005576
UniProt:I1MV70	InterPro:IPR007112	InterPro:IPR007117	InterPro:IPR036749	InterPro:IPR036908	EnsemblPlants:KRH04220
ProteinID:KRH04220	ProteinID:KRH04220.1	PFAM:PF01357	PFAM:PF03330	PRINTS:PR01225	PFscan:PS50842
PFscan:PS50843	PANTHER:PTHR31692	PANTHER:PTHR31692:SF10	InterPro:RlpA-like_DPBB	InterPro:RlpA-like_sf	SUPFAM:SSF49590
SUPFAM:SSF50685	SignalP:SignalP-noTM	UniParc:UPI000233EAB9	:	:	:

Description

hypothetical protein

Coordinates

chr17:+:12147021..12148922

Molecular Weight (calculated)

27428.1 Da

IEP (calculated)

9.179

GRAVY (calculated)

-0.119

Length

248 amino acids

Sequence
(BLAST)

001: MEFGFRHQLG LVCVILLFPA LCNCQEYFTK SRATYYGTPD GFGTPTGACG FGEFGRLMDG YGGRVAGVSG LWRNGAGCGT CYQVKCLMPK LCDVNGVTLV
101: ATDYGQGDRT DFIMSPSAFS RLGVNKIASE EIKKKGTVDI EFKRVPCKYT GNVLFHVQQT SSNPGYLAVV ILNVNGKYDV TAVEMWQKSQ QRWVPLRRSY
201: GAVFDFANPP SGEILLRFKV GSNWKLPKIP IPAYWKPGAT YDTKVQVY

Best Arabidopsis Sequence Match ( AT4G17030.1 )
(BLAST)

001: MKHSHVLLLL FVQVIVLLPL LCLSDDFVNS RATYYGSPDC KANPRGHCGY GEFGRDINNG EVSGVSWRLW NNGTGCGACY QVRCKIPPHC SEEGVYVVAT
101: DSGEGDGTDF ILSPKAYGRM ARPGTENQLY SFGVVNVEYQ RIPCRYAGYN LVYKIHEKSY NPHYLAILVL YVGGVNDILA VEVWQEDCKE WRRMRRVFGA
201: VHDLQNPPRG TLTLRFLVYG SAGINWIQSP NAIPADWTAG ATYDSNILLT

Arabidopsis Description

EXLB1Expansin-like protein [Source:UniProtKB/TrEMBL;Acc:Q0WRS3]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.