CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 9
endoplasmic reticulum 5
vacuole 5
plasma membrane 5
golgi 6

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	secretory
BaCelLo:	secretory
EpiLoc:	golgi
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH55988	Soybean	extracellular	98.13	98.13
KRH26935	Soybean	extracellular	77.15	78.93
KRH22402	Soybean	extracellular	68.91	71.32
AT4G28250.1	Thale cress	extracellular	69.29	70.08
Bra024215.1-P	Field mustard	extracellular	68.54	69.06
CDY58728	Canola	extracellular	68.54	69.06
CDY70556	Canola	extracellular	68.54	69.06
Solyc07g054170.2.1	Tomato	extracellular	68.91	68.91
VIT_12s0059g00190.t01	Wine grape	extracellular	66.67	68.73
CDY18990	Canola	extracellular	68.16	68.68
Bra026272.1-P	Field mustard	extracellular	68.16	68.68
PGSC0003DMT400047177	Potato	extracellular	68.54	68.54
GSMUA_AchrUn_...	Banana	extracellular	67.42	68.44
GSMUA_Achr1P00120_001	Banana	extracellular	64.79	65.04
CDY05789	Canola	extracellular	64.04	64.53
CDY31940	Canola	extracellular	64.04	64.53
Bra036499.1-P	Field mustard	extracellular	64.04	64.53
Solyc10g008440.2.1	Tomato	extracellular	63.3	64.5
PGSC0003DMT400055827	Potato	extracellular	63.3	64.5
GSMUA_Achr5P12080_001	Banana	extracellular	62.92	62.92
AT2G20750.1	Thale cress	extracellular	63.3	62.36
Os02t0639500-01	Rice	extracellular	59.93	61.3
Zm00001d017377_P001	Maize	extracellular	61.42	61.19
TraesCS6A01G235800.1	Wheat	extracellular	60.67	60.67
TraesCS2D01G369200.2	Wheat	extracellular	63.3	60.57
TraesCS2B01G390000.1	Wheat	extracellular	63.67	60.5
TraesCS6D01G218500.1	Wheat	extracellular	60.67	60.45
EES05488	Sorghum	extracellular	61.42	60.07
TraesCS2A01G373000.1	Wheat	extracellular	62.92	59.79
TraesCS6B01G264400.1	Wheat	extracellular	59.93	59.7
HORVU6Hr1G060410.7	Barley	extracellular	59.93	59.7
Zm00001d002860_P002	Maize	extracellular	62.92	55.08
KRH33426	Soybean	extracellular	44.57	43.75
KRH75302	Soybean	extracellular	44.94	43.32
KRG88934	Soybean	extracellular, vacuole	44.94	43.32
KRH33423	Soybean	extracellular	42.32	40.79
KRH65410	Soybean	extracellular	38.58	38.58
Os04t0530100-01	Rice	extracellular, mitochondrion, vacuole	40.07	33.13
KRH57566	Soybean	extracellular	26.97	28.8
KRH04284	Soybean	extracellular	26.22	27.89
KRH57508	Soybean	endoplasmic reticulum	25.47	27.87
KRH04220	Soybean	endoplasmic reticulum	25.09	27.02
KRH57515	Soybean	extracellular	25.09	26.69
KRH77254	Soybean	extracellular	25.47	26.67
KRH28238	Soybean	extracellular	25.47	26.67
KRH76358	Soybean	extracellular, plasma membrane, vacuole	21.72	26.61
KRH77296	Soybean	extracellular	24.72	26.29
KRH28194	Soybean	extracellular	24.72	26.29
KRH29091	Soybean	extracellular	25.47	26.25
KRH04218	Soybean	extracellular	24.34	26.0
KRH04215	Soybean	nucleus	24.34	26.0
KRH04221	Soybean	extracellular	23.97	25.91
KRH57512	Soybean	extracellular	23.97	25.91
KRH24119	Soybean	extracellular	25.09	25.67
KRH04222	Soybean	extracellular	23.97	25.5

Protein Annotations

EntrezGene:100804525	Gene3D:2.40.40.10	Gene3D:2.60.40.760	MapMan:21.4.2.3	EMBL:ACUP02007277	InterPro:Expan_Lol_pI
InterPro:Expansin/allergen_DPBB_dom	InterPro:Expansin_CBD	InterPro:Expansin_CBD_sf	EnsemblPlantsGene:GLYMA_12G111200	GO:GO:0000003	GO:GO:0005575
GO:GO:0005576	GO:GO:0006949	GO:GO:0008150	GO:GO:0009506	GO:GO:0009653	GO:GO:0009987
GO:GO:0019953	UniProt:H9TN49	InterPro:IPR007112	InterPro:IPR007117	InterPro:IPR036749	InterPro:IPR036908
EMBL:JQ303253	EnsemblPlants:KRH25552	ProteinID:KRH25552	ProteinID:KRH25552.1	InterPro:LolPI	PFAM:PF01357
PFAM:PF03330	PRINTS:PR00829	PRINTS:PR01225	PFscan:PS50842	PFscan:PS50843	PANTHER:PTHR31692
PANTHER:PTHR31692:SF5	InterPro:RlpA-like_DPBB	InterPro:RlpA-like_sf	SMART:SM00837	SUPFAM:SSF49590	SUPFAM:SSF50685
SignalP:SignalP-noTM	UniParc:UPI000233C729	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr12:-:10632859..10638492

Molecular Weight (calculated)

29087.0 Da

IEP (calculated)

8.408

GRAVY (calculated)

-0.132

Length

267 amino acids

Sequence
(BLAST)

001: MQLHRVSAAS KLSLTCLSLA LKLVLLYAAE AQLQHRGPDL HWYPGTATWY GDPEGDGSTG GACGYGTMVD VKPFRARVGA LGPLLFMKGE GCGACYKVKC
101: LDKSICSRRA VTVIITDECP GCPSDQTHFD LSGAAFGRMA IAGENGPLRD RGQIPVIYRR TPCKYPGRKI AFHVNEGSTP FWLSLLVEFE DAEGDIGSMH
201: IREAGSTEWL QMNHLWGANW CIIGGPLRGP FSVKLSSSTG RSLSARDVIP TNWVPKATYT SRLNFYP

Best Arabidopsis Sequence Match ( AT4G28250.1 )
(BLAST)

001: MQLFPVMLAT LCIVLQLLIG SSALATTNRH VSNSHWLPAV ATWYGSPNGD GSDGGACGYG TLVDVKPLHA RVGAVNPILF KNGEGCGACY KVRCLDKSIC
101: SRRAVTVIIT DECPGCSKTS THFDLSGAVF GRLAIAGESG PLRNRGLIPV IYRRTACKYR GKNIAFHVNE GSTDFWLSLL VEFEDGEGDI GSMHIRQAGA
201: REWLEMKHVW GANWCIIGGP LKGPFSIKLT TLSAGKTLSA TDVVPRNWAP KATYSSRLNF SPVL

Arabidopsis Description

EXPB3EXPB3 [Source:UniProtKB/TrEMBL;Acc:A0A178USU9]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.