CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 8
endoplasmic reticulum 5
vacuole 6
plasma membrane 5
golgi 6

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	secretory
BaCelLo:	secretory
EpiLoc:	golgi
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH22402	Soybean	extracellular	82.76	83.72
KRH55988	Soybean	extracellular	79.31	77.53
KRH25552	Soybean	extracellular	78.93	77.15
Bra026272.1-P	Field mustard	extracellular	70.5	69.43
CDY18990	Canola	extracellular	70.5	69.43
VIT_12s0059g00190.t01	Wine grape	extracellular	68.58	69.11
GSMUA_AchrUn_...	Banana	extracellular	69.35	68.82
AT4G28250.1	Thale cress	extracellular	68.97	68.18
CDY58728	Canola	extracellular	67.82	66.79
CDY70556	Canola	extracellular	67.43	66.42
Bra024215.1-P	Field mustard	extracellular	67.43	66.42
Solyc07g054170.2.1	Tomato	extracellular	67.82	66.29
GSMUA_Achr5P12080_001	Banana	extracellular	67.43	65.92
Os02t0639500-01	Rice	extracellular	65.9	65.9
TraesCS6A01G235800.1	Wheat	extracellular	67.05	65.54
PGSC0003DMT400047177	Potato	extracellular	67.05	65.54
GSMUA_Achr1P00120_001	Banana	extracellular	66.28	65.04
TraesCS6D01G218500.1	Wheat	extracellular	66.67	64.93
Zm00001d017377_P001	Maize	extracellular	66.67	64.93
TraesCS6B01G264400.1	Wheat	extracellular	66.28	64.55
Solyc10g008440.2.1	Tomato	extracellular	64.75	64.5
EES05488	Sorghum	extracellular	67.43	64.47
PGSC0003DMT400055827	Potato	extracellular	64.37	64.12
HORVU6Hr1G060410.7	Barley	extracellular	65.52	63.81
CDY05789	Canola	extracellular	64.37	63.4
CDY31940	Canola	extracellular	63.98	63.02
Bra036499.1-P	Field mustard	extracellular	63.98	63.02
AT2G20750.1	Thale cress	extracellular	65.13	62.73
TraesCS2D01G369200.2	Wheat	extracellular	67.05	62.72
TraesCS2B01G390000.1	Wheat	extracellular	66.28	61.57
TraesCS2A01G373000.1	Wheat	extracellular	66.28	61.57
Zm00001d002860_P002	Maize	extracellular	66.67	57.05
KRH33426	Soybean	extracellular	45.59	43.75
KRG88934	Soybean	extracellular, vacuole	46.36	43.68
KRH75302	Soybean	extracellular	44.83	42.24
KRH33423	Soybean	extracellular	42.53	40.07
KRH65410	Soybean	extracellular	39.46	38.58
Os04t0530100-01	Rice	extracellular, mitochondrion, vacuole	40.61	32.82
KRH57508	Soybean	endoplasmic reticulum	27.97	29.92
KRH57566	Soybean	extracellular	28.35	29.6
KRH04284	Soybean	extracellular	27.97	29.08
KRH04220	Soybean	endoplasmic reticulum	27.59	29.03
KRH77254	Soybean	extracellular	27.59	28.24
KRH04221	Soybean	extracellular	26.44	27.94
KRH57512	Soybean	extracellular	26.44	27.94
KRH77296	Soybean	extracellular	26.82	27.89
KRH57515	Soybean	extracellular	26.82	27.89
KRH28238	Soybean	extracellular	27.2	27.84
KRH29091	Soybean	extracellular	27.59	27.8
KRH76358	Soybean	extracellular, plasma membrane, vacuole	22.99	27.52
KRH28194	Soybean	extracellular	26.44	27.49
KRH24119	Soybean	extracellular	27.2	27.2
KRH04215	Soybean	nucleus	25.67	26.8
KRH04218	Soybean	extracellular	25.67	26.8
KRH04222	Soybean	extracellular	25.67	26.69

Protein Annotations

EntrezGene:100780112	Gene3D:2.40.40.10	Gene3D:2.60.40.760	MapMan:21.4.2.3	EMBL:ACUP02007760	InterPro:Expan_Lol_pI
InterPro:Expansin/allergen_DPBB_dom	InterPro:Expansin_CBD	InterPro:Expansin_CBD_sf	EnsemblPlantsGene:GLYMA_12G203600	GO:GO:0000003	GO:GO:0005575
GO:GO:0005576	GO:GO:0006949	GO:GO:0008150	GO:GO:0009506	GO:GO:0009653	GO:GO:0009987
GO:GO:0019953	UniProt:H9TN50	InterPro:IPR007112	InterPro:IPR007117	InterPro:IPR036749	InterPro:IPR036908
EMBL:JQ303254	EnsemblPlants:KRH26935	ProteinID:KRH26935	ProteinID:KRH26935.1	InterPro:LolPI	PFAM:PF01357
PFAM:PF03330	PRINTS:PR00829	PRINTS:PR01225	PFscan:PS50842	PFscan:PS50843	PANTHER:PTHR31692
PANTHER:PTHR31692:SF5	InterPro:RlpA-like_DPBB	InterPro:RlpA-like_sf	SMART:SM00837	SUPFAM:SSF49590	SUPFAM:SSF50685
SignalP:SignalP-noTM	UniParc:UPI000233C5AB	:	:	:	:

Description

hypothetical protein

Coordinates

chr12:-:36390283..36394245

Molecular Weight (calculated)

28310.8 Da

IEP (calculated)

8.056

GRAVY (calculated)

-0.136

Length

261 amino acids

Sequence
(BLAST)

001: MQCHRVSAVL FLSLCFRIAL VYAQGEPHLT ALDQHWFPGT ATWYGDPEGD GSTGGACGYG TLVDVKPLKA RVGAVGSVLF KKGEGCGACY KVKCLDHSIC
101: SKRAVTVIIT DECPGCPSDR THFDLSGSAF GRMAVVGENG QLRNRGEIPV IYRRTPCKYA GKNIAFHVNE GSTPFWLSLL VEFEDGDGDI GSMHIQEAGS
201: SEWQQMNHVW GANWCIVKGP LRGPFSVKLS TSTGKSLTAK DVIPSNWTPK ATYTSRLNFL S

Best Arabidopsis Sequence Match ( AT4G28250.1 )
(BLAST)

001: MQLFPVMLAT LCIVLQLLIG SSALATTNRH VSNSHWLPAV ATWYGSPNGD GSDGGACGYG TLVDVKPLHA RVGAVNPILF KNGEGCGACY KVRCLDKSIC
101: SRRAVTVIIT DECPGCSKTS THFDLSGAVF GRLAIAGESG PLRNRGLIPV IYRRTACKYR GKNIAFHVNE GSTDFWLSLL VEFEDGEGDI GSMHIRQAGA
201: REWLEMKHVW GANWCIIGGP LKGPFSIKLT TLSAGKTLSA TDVVPRNWAP KATYSSRLNF SPVL

Arabidopsis Description

EXPB3EXPB3 [Source:UniProtKB/TrEMBL;Acc:A0A178USU9]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.