CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 7
endoplasmic reticulum 5
vacuole 5
plasma membrane 5
golgi 5
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra026272.1-P	Field mustard	extracellular	98.87	98.87
AT4G28250.1	Thale cress	extracellular	91.32	91.67
CDY70556	Canola	extracellular	91.32	91.32
CDY58728	Canola	extracellular	90.94	90.94
CDY05789	Canola	extracellular	73.21	73.21
CDY31940	Canola	extracellular	72.83	72.83
KRH26935	Soybean	extracellular	69.43	70.5
KRH55988	Soybean	extracellular	69.06	68.54
VIT_12s0059g00190.t01	Wine grape	extracellular	66.79	68.34
KRH25552	Soybean	extracellular	68.68	68.16
GSMUA_AchrUn_...	Banana	extracellular	67.17	67.68
KRH22402	Soybean	extracellular	65.28	67.05
TraesCS6A01G235800.1	Wheat	extracellular	66.04	65.54
Os02t0639500-01	Rice	extracellular	64.15	65.13
TraesCS6D01G218500.1	Wheat	extracellular	65.66	64.93
GSMUA_Achr1P00120_001	Banana	extracellular	64.91	64.66
TraesCS6B01G264400.1	Wheat	extracellular	65.28	64.55
Zm00001d017377_P001	Maize	extracellular	64.91	64.18
Solyc07g054170.2.1	Tomato	extracellular	64.53	64.04
HORVU6Hr1G060410.7	Barley	extracellular	64.53	63.81
PGSC0003DMT400055827	Potato	extracellular	63.02	63.74
GSMUA_Achr5P12080_001	Banana	extracellular	64.15	63.67
EES05488	Sorghum	extracellular	65.28	63.37
TraesCS2B01G390000.1	Wheat	extracellular	67.17	63.35
TraesCS2A01G373000.1	Wheat	extracellular	67.17	63.35
PGSC0003DMT400047177	Potato	extracellular	63.77	63.3
TraesCS2D01G369200.2	Wheat	extracellular	66.42	63.08
Solyc10g008440.2.1	Tomato	extracellular	62.26	62.98
Zm00001d002860_P002	Maize	extracellular	66.79	58.03
CDY18950	Canola	cytosol, extracellular, plastid	39.25	43.88
CDY72345	Canola	cytosol	40.38	43.85
CDX83404	Canola	extracellular	41.51	42.47
CDX74711	Canola	extracellular	41.51	42.15
CDY70406	Canola	extracellular	43.02	41.61
CDX74710	Canola	extracellular	43.02	41.61
CDY18946	Canola	extracellular	40.75	40.6
CDY18951	Canola	extracellular	41.13	39.64
CDY18948	Canola	extracellular	28.68	38.97
CDY72505	Canola	cytosol	23.4	38.75
CDY72655	Canola	cytosol, plastid	24.53	38.46
CDX96901	Canola	extracellular	38.11	38.11
CDY71186	Canola	extracellular	38.87	38.01
CDX67835	Canola	extracellular	38.11	37.97
CDY14888	Canola	extracellular	37.74	37.74
CDX95627	Canola	extracellular	37.74	35.84
Os04t0530100-01	Rice	extracellular, mitochondrion, vacuole	38.11	31.27
CDY09659	Canola	plasma membrane	28.68	30.4
CDY65447	Canola	extracellular	28.68	30.4
CDY42954	Canola	extracellular	28.68	30.4
CDY35606	Canola	extracellular	28.3	30.0
CDX74713	Canola	extracellular	38.49	29.74
CDY48362	Canola	extracellular	36.6	27.17
CDX90493	Canola	cytosol, extracellular, nucleus	13.21	26.72
CDY69288	Canola	extracellular	26.04	26.14
CDY72634	Canola	extracellular	25.28	25.28
CDY64278	Canola	extracellular	25.28	25.28
CDY52801	Canola	extracellular	25.66	25.28
CDY61895	Canola	extracellular	25.28	24.91

Protein Annotations

Gene3D:2.40.40.10	Gene3D:2.60.40.760	MapMan:21.4.2.3	GO:A0A078FX64	UniProt:A0A078FX64	EnsemblPlants:CDY18990
ProteinID:CDY18990	ProteinID:CDY18990.1	InterPro:Expan_Lol_pI	InterPro:Expansin/allergen_DPBB_dom	InterPro:Expansin_CBD	InterPro:Expansin_CBD_sf
GO:GO:0000003	GO:GO:0005575	GO:GO:0005576	GO:GO:0008150	GO:GO:0019953	EnsemblPlantsGene:GSBRNA2T00006228001
InterPro:IPR007112	InterPro:IPR007117	InterPro:IPR036749	InterPro:IPR036908	InterPro:LolPI	PFAM:PF01357
PFAM:PF03330	PRINTS:PR00829	PRINTS:PR01225	PFscan:PS50842	PFscan:PS50843	PANTHER:PTHR31692
PANTHER:PTHR31692:SF5	InterPro:RlpA-like_DPBB	InterPro:RlpA-like_sf	SMART:SM00837	SUPFAM:SSF49590	SUPFAM:SSF50685
SignalP:SignalP-noTM	UniParc:UPI0004EE4A56	SEG:seg	:	:	:

Description

BnaC01g20780DBnaC01g20780D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FX64]

Coordinates

chrLK032091:+:204009..205846

Molecular Weight (calculated)

28418.1 Da

IEP (calculated)

8.705

GRAVY (calculated)

0.025

Length

265 amino acids

Sequence
(BLAST)

001: MQLSLAIILA TLCIFLRLLN SSSAPVTSNS HASNSHWLPA VATWYGSANG DGSDGGACGY GTLVDVKPLH ARVGAVNPIL FKNGEGCGAC YKVRCLDRSI
101: CSRRAVTVII TDECPGCSKT NTHFDLSGAA FGRLAISGES GPLRNRGLIP VIYRRTACKY RGKNIAFHVN EGSTDFWLSL LVEFEDGEGD IGSMHIRQAG
201: ASEWLEMKHV WGANWCIVGG PLKGPFSIKL NTLSAGKTLS ATDVVPRNWA PKATYTSRLN FSPVL

Best Arabidopsis Sequence Match ( AT4G28250.1 )
(BLAST)

001: MQLFPVMLAT LCIVLQLLIG SSALATTNRH VSNSHWLPAV ATWYGSPNGD GSDGGACGYG TLVDVKPLHA RVGAVNPILF KNGEGCGACY KVRCLDKSIC
101: SRRAVTVIIT DECPGCSKTS THFDLSGAVF GRLAIAGESG PLRNRGLIPV IYRRTACKYR GKNIAFHVNE GSTDFWLSLL VEFEDGEGDI GSMHIRQAGA
201: REWLEMKHVW GANWCIIGGP LKGPFSIKLT TLSAGKTLSA TDVVPRNWAP KATYSSRLNF SPVL

Arabidopsis Description

EXPB3EXPB3 [Source:UniProtKB/TrEMBL;Acc:A0A178USU9]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.