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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • plasma membrane 1
  • golgi 1
  • cytosol 2
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, secretory
BaCelLo:secretory
MultiLoc:cytosol
PProwler:mitochondrion
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY18950 Canola cytosol, extracellular, plastid 92.21 94.94
CDX74711 Canola extracellular 100.0 93.49
CDY18946 Canola extracellular 97.95 89.85
CDX83404 Canola extracellular 81.56 76.83
AT2G45110.1 Thale cress extracellular 78.69 74.13
CDY72505 Canola cytosol 48.36 73.75
CDY72655 Canola cytosol, plastid 49.59 71.6
AT1G65681.1 Thale cress cytosol 65.16 71.3
CDX96901 Canola extracellular 73.77 67.92
CDY14888 Canola extracellular 72.95 67.17
CDX95627 Canola extracellular 76.64 67.03
HORVU2Hr1G013380.1 Barley cytosol, extracellular, mitochondrion 54.1 55.7
TraesCS2B01G095600.1 Wheat extracellular 56.15 53.73
HORVU2Hr1G013360.1 Barley extracellular 54.92 53.39
TraesCS2B01G607400.1 Wheat extracellular 53.69 52.61
TraesCSU01G009600.1 Wheat extracellular 54.51 52.57
TraesCS2A01G081200.1 Wheat extracellular 54.51 52.36
TraesCS2D01G078900.1 Wheat extracellular 54.51 52.36
TraesCS2D01G592900.1 Wheat extracellular 53.28 52.21
TraesCS2A01G580300.1 Wheat extracellular 52.46 51.41
Zm00001d051368_P001 Maize extracellular 33.2 51.27
TraesCS2D01G078800.1 Wheat extracellular 53.28 51.18
GSMUA_Achr2P13740_001 Banana extracellular 54.92 51.15
TraesCS2A01G580200.1 Wheat extracellular 52.46 51.0
TraesCS2B01G095700.1 Wheat extracellular 52.46 50.79
TraesCS2A01G080800.1 Wheat extracellular 52.87 50.79
TraesCS2B01G122100.1 Wheat extracellular 39.75 50.79
EES07509 Sorghum extracellular 54.92 50.76
Zm00001d017493_P001 Maize extracellular 55.33 50.56
GSMUA_Achr2P13730_001 Banana extracellular 54.1 50.38
KXG19818 Sorghum extracellular 53.28 50.19
TraesCS2D01G104800.1 Wheat extracellular 52.05 50.0
HORVU0Hr1G016380.2 Barley extracellular 54.1 49.81
GSMUA_Achr2P13750_001 Banana extracellular 53.28 49.81
EER88254 Sorghum extracellular 52.87 49.81
Os04t0552000-00 Rice extracellular 53.28 49.24
Zm00001d045861_P001 Maize mitochondrion 53.28 49.06
TraesCS2D01G078600.1 Wheat extracellular 47.95 48.95
TraesCS6A01G249700.1 Wheat extracellular 53.28 48.87
TraesCS6D01G231400.1 Wheat extracellular 52.87 48.5
TraesCS2A01G413600.1 Wheat extracellular 52.05 48.47
TraesCS2B01G432300.1 Wheat plastid 52.05 48.47
Zm00001d026170_P001 Maize extracellular 52.05 48.47
TraesCS6A01G249400.2 Wheat extracellular 52.46 48.3
Solyc10g018500.1.1 Tomato extracellular 52.46 48.3
Zm00001d045792_P001 Maize extracellular 53.28 48.15
TraesCS2A01G105200.1 Wheat extracellular 50.0 48.03
CDX67835 Canola extracellular 52.05 47.74
Os05t0246300-01 Rice extracellular 51.64 47.73
TraesCS2D01G411000.1 Wheat extracellular 51.23 47.71
CDY18948 Canola extracellular 38.11 47.69
Os02t0658600-00 Rice plastid 52.87 47.25
CDY71186 Canola extracellular 52.46 47.23
EES11234 Sorghum extracellular 50.41 46.77
Solyc01g090820.1.1 Tomato extracellular 48.36 45.91
CDY70406 Canola extracellular 50.41 44.89
CDX74710 Canola extracellular 50.0 44.53
HORVU2Hr1G097480.1 Barley extracellular 51.64 44.52
CDY18951 Canola extracellular 50.0 44.36
Solyc07g049540.1.1 Tomato extracellular 46.72 44.36
HORVU2Hr1G013340.1 Barley extracellular 50.82 42.47
Solyc05g052330.1.1 Tomato extracellular 46.31 42.16
PGSC0003DMT400030395 Potato cytosol, extracellular, mitochondrion, nucleus 22.13 41.54
GSMUA_AchrUn_... Banana extracellular 29.92 40.56
CDY18990 Canola extracellular 43.85 40.38
PGSC0003DMT400095086 Potato plastid 40.98 40.0
CDY05789 Canola extracellular 42.21 38.87
TraesCS5B01G376500.1 Wheat extracellular 48.77 38.51
CDY58728 Canola extracellular 41.8 38.49
CDY31940 Canola extracellular 41.8 38.49
CDY70556 Canola extracellular 41.8 38.49
TraesCS5D01G384200.1 Wheat extracellular 48.36 38.31
Os03t0645000-00 Rice mitochondrion 47.13 36.74
KXG37946 Sorghum extracellular 48.77 36.62
EER93754 Sorghum extracellular 45.49 36.27
CDY48362 Canola extracellular 50.41 34.45
CDX74713 Canola extracellular 47.95 34.11
CDY42954 Canola extracellular 29.92 29.2
CDY65447 Canola extracellular 29.51 28.8
CDY35606 Canola extracellular 29.51 28.8
CDY09659 Canola plasma membrane 29.51 28.8
HORVU5Hr1G092910.9 Barley plastid 47.95 28.26
CDX90493 Canola cytosol, extracellular, nucleus 14.34 26.72
CDY52801 Canola extracellular 27.87 25.28
CDY69288 Canola extracellular 27.05 25.0
CDY61895 Canola extracellular 27.46 24.91
CDY72634 Canola extracellular 26.64 24.53
CDY64278 Canola extracellular 26.64 24.53
Zm00001d033231_P003 Maize extracellular 45.08 15.41
Protein Annotations
Gene3D:2.40.40.10Gene3D:2.60.40.760MapMan:35.1GO:A0A078K0Z6UniProt:A0A078K0Z6EnsemblPlants:CDY72345
ProteinID:CDY72345ProteinID:CDY72345.1InterPro:Expan_Lol_pIInterPro:Expansin/allergen_DPBB_domInterPro:Expansin_CBDInterPro:Expansin_CBD_sf
GO:GO:0000003GO:GO:0005575GO:GO:0005576GO:GO:0008150GO:GO:0019953EnsemblPlantsGene:GSBRNA2T00027849001
InterPro:IPR007112InterPro:IPR007117InterPro:IPR036749InterPro:IPR036908InterPro:LolPIPFAM:PF01357
PFAM:PF03330PRINTS:PR00829PRINTS:PR01225PFscan:PS50842PFscan:PS50843PANTHER:PTHR31692
PANTHER:PTHR31692:SF3InterPro:RlpA-like_DPBBInterPro:RlpA-like_sfSMART:SM00837SUPFAM:SSF49590SUPFAM:SSF50685
UniParc:UPI0004EE4C6BSEG:seg::::
Description
BnaCnng77220DBnaCnng77220D protein [Source:UniProtKB/TrEMBL;Acc:A0A078K0Z6]
Coordinates
chrLK050371:+:1..1163
Molecular Weight (calculated)
25275.7 Da
IEP (calculated)
4.544
GRAVY (calculated)
-0.078
Length
244 amino acids
Sequence
(BLAST)
001: FKFCYCQNET INAAGWADAD AGATWYGEPE GAGSTGGACG YGVAVANPPL NAMVSAGGPS LFNNGKGCGT CYQIMCTGNP ACSGSPITVT ITDECPGGPC
101: ASEPVHFDLS GKAMGALAKP GQAAQLRSAG PVSVSYRRAA CLYQGTEIAF HVDAGSTPFY VAFVVEYENG EGDLASVEIQ PASGGFMPMQ EMRSAEWKLN
201: SGGPLSGPFN IRLTSGESRK VVVAQAVIPA DWKPDQTYRS IVNF
Best Arabidopsis Sequence Match ( AT2G45110.1 )
(BLAST)
001: MASSQRYFAL LALFAVSLKF CYCQNETIDV AGSGTAGVTW YGEPFGAGST GGACGYGSAV ANPPLYAMVS AGGPSLFNNG KGCGTCYQVV CIGHPACSGS
101: PITVTITDEC PGGPCASEPV HIDLSGKAMG ALAKPGQADQ LRSAGVIRVN YKRAACLYRG TNIVFRMDAG ANPYYISFVV EYENGDGDLS NVEIQPAGGS
201: FISMQEMRSA VWKVNSGSAL RGPFNIRLTS GESHKVIVAY NVIPANWKPD ESYRSIVNF
Arabidopsis Description
EXPB4Expansin-B4 [Source:UniProtKB/Swiss-Prot;Acc:Q9SHD1]
SUBAcon: [extracellular]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.