Skip to main content
crop-pal logo
Canola
Search for another protein from :
Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular

Predictor Summary:
  • extracellular 3
  • endoplasmic reticulum 1
  • vacuole 1
  • plasma membrane 1
  • golgi 1
  • mitochondrion 2
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:extracellular
Any Predictor:mitochondrion, plastid, secretory
BaCelLo:secretory
MultiLoc:extracellular
Predotar:mitochondrion
PProwler:mitochondrion
WoLF PSORT:plastid
YLoc:extracellular
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY18951 Canola extracellular 89.23 63.27
CDX74710 Canola extracellular 77.95 55.47
CDY70406 Canola extracellular 77.44 55.11
AT1G65680.1 Thale cress extracellular 72.31 51.65
CDX74713 Canola extracellular 87.69 49.85
Zm00001d051368_P001 Maize extracellular 40.0 49.37
VIT_15s0021g02700.t01 Wine grape extracellular 62.56 44.69
VIT_15s0021g02670.t01 Wine grape extracellular 61.03 43.59
Os04t0552000-00 Rice extracellular 57.95 42.8
TraesCS2B01G432300.1 Wheat plastid 57.44 42.75
TraesCS2D01G411000.1 Wheat extracellular 56.92 42.37
TraesCS2A01G413600.1 Wheat extracellular 56.92 42.37
Os05t0246300-01 Rice extracellular 56.92 42.05
Zm00001d026170_P001 Maize extracellular 55.38 41.22
EES11234 Sorghum extracellular 55.38 41.06
TraesCS2B01G607400.1 Wheat extracellular 52.31 40.96
HORVU2Hr1G013380.1 Barley cytosol, extracellular, mitochondrion 49.74 40.93
EES07509 Sorghum extracellular 55.38 40.91
KRH65410 Soybean extracellular 55.9 40.82
GSMUA_AchrUn_... Banana extracellular 37.44 40.56
TraesCS2D01G592900.1 Wheat extracellular 51.28 40.16
GSMUA_Achr2P13730_001 Banana extracellular 53.85 40.08
HORVU2Hr1G097480.1 Barley extracellular 57.95 39.93
Zm00001d017493_P001 Maize extracellular 54.36 39.7
TraesCS2A01G580200.1 Wheat extracellular 50.77 39.44
TraesCS2A01G580300.1 Wheat extracellular 50.26 39.36
KRG88934 Soybean extracellular, vacuole 55.9 39.35
GSMUA_Achr2P13740_001 Banana extracellular 52.82 39.31
HORVU2Hr1G013360.1 Barley extracellular 50.26 39.04
EER88254 Sorghum extracellular 51.79 39.0
KXG19818 Sorghum extracellular 51.79 39.0
KRH75302 Soybean extracellular 55.38 38.99
HORVU0Hr1G016380.2 Barley extracellular 52.82 38.87
CDY18950 Canola cytosol, extracellular, plastid 47.18 38.82
TraesCS6D01G231400.1 Wheat extracellular 52.82 38.72
TraesCS6A01G249700.1 Wheat extracellular 52.82 38.72
CDY72345 Canola cytosol 47.69 38.11
TraesCS2D01G078800.1 Wheat extracellular 49.23 37.8
Zm00001d045861_P001 Maize mitochondrion 51.28 37.74
TraesCS6A01G249400.2 Wheat extracellular 51.28 37.74
TraesCSU01G009600.1 Wheat extracellular 48.72 37.55
TraesCS2D01G078900.1 Wheat extracellular 48.72 37.4
TraesCS2B01G095700.1 Wheat extracellular 48.21 37.3
TraesCS2B01G095600.1 Wheat extracellular 48.72 37.25
GSMUA_Achr2P13750_001 Banana extracellular 49.74 37.16
KRH33426 Soybean extracellular 51.79 37.13
Zm00001d045792_P001 Maize extracellular 51.28 37.04
TraesCS2A01G081200.1 Wheat extracellular 48.21 37.01
Os02t0658600-00 Rice plastid 51.79 37.0
KRH33423 Soybean extracellular 52.31 36.82
TraesCS2A01G080800.1 Wheat extracellular 47.69 36.61
TraesCS2D01G104800.1 Wheat extracellular 47.18 36.22
CDX74711 Canola extracellular 47.69 35.63
CDY18946 Canola extracellular 47.18 34.59
CDX83404 Canola extracellular 45.64 34.36
CDX96901 Canola extracellular 46.67 34.34
CDY14888 Canola extracellular 46.67 34.34
TraesCS2A01G105200.1 Wheat extracellular 44.62 34.25
TraesCS2D01G078600.1 Wheat extracellular 41.54 33.89
TraesCS2B01G122100.1 Wheat extracellular 32.82 33.51
CDX95627 Canola extracellular 46.67 32.62
HORVU2Hr1G013340.1 Barley extracellular 48.21 32.19
CDY72655 Canola cytosol, plastid 27.69 31.95
CDY72505 Canola cytosol 25.64 31.25
TraesCS5D01G384200.1 Wheat extracellular 48.72 30.84
TraesCS5B01G376500.1 Wheat extracellular 48.21 30.42
EER93754 Sorghum extracellular 47.69 30.39
KXG37946 Sorghum extracellular 49.23 29.54
Os03t0645000-00 Rice mitochondrion 47.18 29.39
CDY05789 Canola extracellular 39.49 29.06
CDX67835 Canola extracellular 39.49 28.95
CDY18990 Canola extracellular 38.97 28.68
CDY31940 Canola extracellular 38.97 28.68
CDY58728 Canola extracellular 38.97 28.68
CDY71186 Canola extracellular 39.49 28.41
CDY70556 Canola extracellular 38.46 28.3
CDY35606 Canola extracellular 31.28 24.4
CDY42954 Canola extracellular 31.28 24.4
CDY09659 Canola plasma membrane 30.77 24.0
CDY65447 Canola extracellular 30.77 24.0
HORVU5Hr1G092910.9 Barley plastid 47.69 22.46
CDY48362 Canola extracellular 41.03 22.41
CDY52801 Canola extracellular 30.26 21.93
CDY61895 Canola extracellular 29.74 21.56
CDY69288 Canola extracellular 28.21 20.83
CDY64278 Canola extracellular 27.69 20.38
CDY72634 Canola extracellular 27.69 20.38
CDX90493 Canola cytosol, extracellular, nucleus 13.33 19.85
Zm00001d033231_P003 Maize extracellular 47.18 12.89
Protein Annotations
Gene3D:2.40.40.10Gene3D:2.60.40.760MapMan:35.1GO:A0A078G2R2UniProt:A0A078G2R2EnsemblPlants:CDY18948
ProteinID:CDY18948ProteinID:CDY18948.1InterPro:Expan_Lol_pIInterPro:Expansin/allergen_DPBB_domInterPro:Expansin_CBDInterPro:Expansin_CBD_sf
GO:GO:0000003GO:GO:0005575GO:GO:0005576GO:GO:0008150GO:GO:0019953EnsemblPlantsGene:GSBRNA2T00006161001
InterPro:IPR007112InterPro:IPR007117InterPro:IPR036749InterPro:IPR036908InterPro:LolPIPFAM:PF01357
PFAM:PF03330PRINTS:PR00829PRINTS:PR01225PFscan:PS50842PFscan:PS50843PANTHER:PTHR31692
PANTHER:PTHR31692:SF3InterPro:RlpA-like_DPBBInterPro:RlpA-like_sfSMART:SM00837SUPFAM:SSF49590SUPFAM:SSF50685
UniParc:UPI0004EEA634:::::
Description
BnaC04g04020DBnaC04g04020D protein [Source:UniProtKB/TrEMBL;Acc:A0A078G2R2]
Coordinates
chrLK032090:-:558949..576390
Molecular Weight (calculated)
20411.0 Da
IEP (calculated)
4.641
GRAVY (calculated)
0.013
Length
195 amino acids
Sequence
(BLAST)
001: MVRNFKITIK SLGLTGGSDW SLAGATFYGL PTGYGTDAGA CGYKNAVAQA PFSSMVSAGG PSLYKSGRGC GACYQIKCTS NQACSTNPVT AVITDECGQG
101: CLTESVHFDL SGTAFGAMAV PGQDSQLRTA GVLQILYRKV ECNYNSETVV FQVDGGSNAY YFAALVEYVN GDGEIGLVEL KQALDSDTWL PMSHS
Best Arabidopsis Sequence Match ( AT1G65680.1 )
(BLAST)
001: MTILVVDRYY MLMNLLFALT CLLLNLTHCF SPKKFNISAA TTSDSDWSIA GSTWYGNPTG YGSDGGACGY GNAVAQPPFS KMVSAGGPSL FKSGKGCGAC
101: YQVKCTSKSA CSKNPVTVVI TDECPGCVKE SVHFDLSGTA FGAMAISGQD SQLRNVGELQ ILYKKVECNY IGKTVTFQVD KGSNANSFAV LVAYVNGDGE
201: IGRIELKQAL DSDKWLSMSQ SWGAVWKLDV SSPLRAPLSL RVTSLESGKT VVASNVIPAN WQPGAIYKSN VNF
Arabidopsis Description
EXPB2Putative expansin-B2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SHY6]
SUBAcon: [extracellular]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.