Factsheet for GSMUA_Achr2P13750_001

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 9
endoplasmic reticulum 5
vacuole 5
plasma membrane 5
golgi 5
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	plastid, secretory
BaCelLo:	secretory
EpiLoc:	extracellular
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr2P13740_001	Banana	extracellular	90.8	90.46
GSMUA_Achr2P13730_001	Banana	extracellular	89.66	89.31
GSMUA_AchrUn_...	Banana	extracellular	67.05	66.29
GSMUA_Achr2P11930_001	Banana	extracellular	35.63	57.06
VIT_15s0021g02670.t01	Wine grape	extracellular	58.62	56.04
GSMUA_AchrUn_...	Banana	extracellular	37.93	55.0
VIT_15s0021g02700.t01	Wine grape	extracellular	56.7	54.21
CDY72345	Canola	cytosol	49.81	53.28
GSMUA_Achr4P26910_001	Banana	extracellular	55.17	52.94
KRH33426	Soybean	extracellular	55.17	52.94
CDY18950	Canola	cytosol, extracellular, plastid	47.51	52.32
GSMUA_AchrUn_...	Banana	extracellular	18.39	52.17
GSMUA_Achr7P07040_001	Banana	extracellular	55.94	51.96
Solyc01g090820.1.1	Tomato	extracellular	50.96	51.75
CDX74711	Canola	extracellular	50.96	50.96
AT1G65680.1	Thale cress	extracellular	52.87	50.55
CDY18951	Canola	extracellular	53.26	50.55
KRG88934	Soybean	extracellular, vacuole	53.64	50.54
KRH33423	Soybean	extracellular	53.64	50.54
KRH75302	Soybean	extracellular	53.64	50.54
Solyc01g090810.2.1	Tomato	extracellular	52.87	50.18
CDX83404	Canola	extracellular	49.43	49.81
Bra000370.1-P	Field mustard	extracellular	49.43	49.81
CDY18948	Canola	extracellular	37.16	49.74
PGSC0003DMT400048506	Potato	plastid	36.78	49.48
AT2G45110.1	Thale cress	extracellular	49.04	49.42
AT1G65681.1	Thale cress	cytosol	42.15	49.33
Solyc10g018500.1.1	Tomato	extracellular	49.81	49.06
CDY18946	Canola	extracellular	49.81	48.87
CDY70406	Canola	extracellular	50.96	48.54
CDX74710	Canola	extracellular	50.96	48.54
Bra004889.1-P	Field mustard	extracellular	50.96	48.36
KRH65410	Soybean	extracellular	49.43	48.31
CDY72505	Canola	cytosol	29.5	48.12
VIT_09s0002g08510.t01	Wine grape	extracellular	51.34	48.03
CDX96901	Canola	extracellular	48.66	47.92
Solyc07g049540.1.1	Tomato	extracellular	46.74	47.47
CDY72655	Canola	cytosol, plastid	30.65	47.34
Bra035987.1-P	Field mustard	extracellular	47.89	47.17
CDY14888	Canola	extracellular	47.89	47.17
Solyc05g052330.1.1	Tomato	extracellular	48.28	47.01
PGSC0003DMT400095086	Potato	plastid	43.68	45.6
AT3G60570.1	Thale cress	extracellular	45.98	45.45
PGSC0003DMT400030395	Potato	cytosol, extracellular, mitochondrion, nucleus	22.61	45.38
Solyc03g093390.2.1	Tomato	extracellular, nucleus	49.04	44.91
Bra003421.1-P	Field mustard	extracellular	44.06	43.23
CDX67835	Canola	extracellular	44.06	43.23
CDY71186	Canola	extracellular	44.83	43.17
CDX95627	Canola	extracellular	45.98	43.01
GSMUA_AchrUn_...	Banana	extracellular	43.3	42.97
GSMUA_Achr1P00120_001	Banana	extracellular	42.91	42.11
GSMUA_Achr5P12080_001	Banana	extracellular	42.53	41.57
Bra004891.1-P	Field mustard	cytosol, nucleus, plastid	21.46	40.58
Bra004890.1-P	Field mustard	extracellular	49.43	40.57
CDX74713	Canola	extracellular	49.81	37.9
GSMUA_Achr11P...	Banana	extracellular	33.33	34.25
CDY48362	Canola	extracellular	44.83	32.77
Bra014484.1-P	Field mustard	extracellular	44.83	32.5
GSMUA_AchrUn_...	Banana	extracellular	31.03	31.89
GSMUA_Achr11P...	Banana	extracellular	32.18	31.58
GSMUA_Achr5P19030_001	Banana	extracellular	29.89	29.55
GSMUA_Achr5P11590_001	Banana	extracellular	29.5	29.5
GSMUA_AchrUn_...	Banana	extracellular	20.69	28.72
GSMUA_Achr11P...	Banana	extracellular	27.97	27.55
PGSC0003DMT400066943	Potato	cytosol, plastid, vacuole	46.74	26.58
GSMUA_Achr1P02170_001	Banana	extracellular, peroxisome, plastid	31.03	26.38
GSMUA_Achr5P12710_001	Banana	extracellular, nucleus, plasma membrane	26.44	21.63

Protein Annotations

Gene3D:2.40.40.10	Gene3D:2.60.40.760	MapMan:35.1	InterPro:Expan_Lol_pI	InterPro:Expansin/allergen_DPBB_dom	InterPro:Expansin_CBD
InterPro:Expansin_CBD_sf	GO:GO:0000003	GO:GO:0005575	GO:GO:0005576	GO:GO:0008150	GO:GO:0019953
EnsemblPlantsGene:GSMUA_Achr2G13750_001	EnsemblPlants:GSMUA_Achr2P13750_001	EnsemblPlants:GSMUA_Achr2T13750_001	InterPro:IPR007112	InterPro:IPR007117	InterPro:IPR036749
InterPro:IPR036908	InterPro:LolPI	UniProt:M0S7R6	PFAM:PF01357	PFAM:PF03330	PRINTS:PR00829
PRINTS:PR01225	PFscan:PS50842	PFscan:PS50843	PANTHER:PTHR31692	PANTHER:PTHR31692:SF3	InterPro:RlpA-like_DPBB
InterPro:RlpA-like_sf	SMART:SM00837	SUPFAM:SSF49590	SUPFAM:SSF50685	SignalP:SignalP-noTM	UniParc:UPI0002961B5E
SEG:seg	:	:	:	:	:

Description

Expansin-B15 [Source:GMGC_GENE;Acc:GSMUA_Achr2G13750_001]

Coordinates

chr2:-:15781674..15782718

Molecular Weight (calculated)

27205.1 Da

IEP (calculated)

8.253

GRAVY (calculated)

0.076

Length

261 amino acids

Sequence
(BLAST)

001: MASSFRRLSS LLVFVGFLSL LRPCACYNRM NSSDTDLAMS PAVATWYGAA EGPGSTGGAC GYGDGVAKAP FESKISAGNS ALFKSGKGCG ACYQVACTAN
101: PACSGRPVTV VITDQCPGAC DNDPLHFDLS GAAFGAMAKP GEAAALRSAG FIHVQYARVP CSYRGFHIAF RVDNGSNPNY FAVLPEFVNG DGEISAAEVG
201: QGSSWSPMQF SWGALWKLNA PVHGPASIRL TSAVSRKTIV ATNVIPAGWR PGATYYSNVN F

Best Arabidopsis Sequence Match ( AT3G60570.1 )
(BLAST)

001: MASSSLKCFS FIVVLTTFFA ISLKPCYCHN KTHWNTAGIT WYGDREGPGT TGGACGYGDA VAKHPYRCMV SAGGPSLFKD GKGCGACYRL KCDHPLCTKK
101: PIKVMISDEC PGCTKESVHF DLSGKAFGAL AKRGKGDQLR NLGELKVSYK RACCKHPKTM IAIHVDAGAN PYYMSFAVKF ANGDGNFACI EVQPAGGQYM
201: KMEEMRSAVW RLSPGVPLKG PFNIRLTSAV SGKKIIAKGV IPEKWSPGAI YHSKVNFPVQ RKQK

Arabidopsis Description

EXPB5Expansin-B5 [Source:UniProtKB/Swiss-Prot;Acc:Q9M203]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.