Factsheet for GSMUA_Achr11P00090_001

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 8
endoplasmic reticulum 5
vacuole 5
plasma membrane 5
golgi 5
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	plastid, secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_AchrUn_...	Banana	extracellular	70.87	70.87
Os07t0496250-01	Rice	extracellular	61.42	60.94
VIT_02s0012g00830.t01	Wine grape	extracellular	60.63	60.39
KRH28238	Soybean	extracellular	59.84	59.61
PGSC0003DMT400052810	Potato	extracellular	58.66	58.89
KRH77254	Soybean	extracellular	59.06	58.82
PGSC0003DMT400004660	Potato	extracellular	59.06	58.82
Solyc08g077330.2.1	Tomato	extracellular	58.66	58.43
KRH57566	Soybean	extracellular	57.09	58.0
KRH04284	Soybean	extracellular	56.69	57.37
KRH76358	Soybean	extracellular, plasma membrane, vacuole	48.82	56.88
OQU89980	Sorghum	extracellular, plasma membrane, vacuole	42.52	48.0
GSMUA_Achr5P12710_001	Banana	extracellular, nucleus, plasma membrane	58.27	46.4
GSMUA_AchrUn_...	Banana	extracellular	27.95	37.77
GSMUA_Achr5P11590_001	Banana	extracellular	35.43	34.48
GSMUA_Achr11P...	Banana	extracellular	35.43	33.83
GSMUA_Achr2P13750_001	Banana	extracellular	34.25	33.33
GSMUA_Achr2P13740_001	Banana	extracellular	34.25	33.21
GSMUA_Achr5P19030_001	Banana	extracellular	34.25	32.95
GSMUA_AchrUn_...	Banana	extracellular	34.25	32.95
GSMUA_Achr2P13730_001	Banana	extracellular	33.46	32.44
GSMUA_Achr2P11930_001	Banana	extracellular	20.47	31.9
GSMUA_Achr4P26910_001	Banana	extracellular	33.86	31.62
GSMUA_Achr11P...	Banana	extracellular	32.68	31.32
GSMUA_Achr1P02170_001	Banana	extracellular, peroxisome, plastid	35.04	28.99
GSMUA_Achr7P07040_001	Banana	extracellular	31.1	28.11
GSMUA_AchrUn_...	Banana	extracellular	19.68	27.78
GSMUA_AchrUn_...	Banana	extracellular	9.84	27.17
GSMUA_AchrUn_...	Banana	extracellular	27.17	26.24
GSMUA_Achr5P12080_001	Banana	extracellular	26.77	25.47
GSMUA_Achr1P00120_001	Banana	extracellular	26.38	25.19

Protein Annotations

Gene3D:2.40.40.10	Gene3D:2.60.40.760	MapMan:21.4.2.4	InterPro:Expan_Lol_pI	InterPro:Expansin/allergen_DPBB_dom	InterPro:Expansin_CBD
InterPro:Expansin_CBD_sf	GO:GO:0005575	GO:GO:0005576	EnsemblPlantsGene:GSMUA_Achr11G00090_001	EnsemblPlants:GSMUA_Achr11P00090_001	EnsemblPlants:GSMUA_Achr11T00090_001
InterPro:IPR007112	InterPro:IPR007117	InterPro:IPR036749	InterPro:IPR036908	UniProt:M0RN40	PFAM:PF01357
PFAM:PF03330	PRINTS:PR01225	PFscan:PS50842	PFscan:PS50843	PANTHER:PTHR31692	PANTHER:PTHR31692:SF2
InterPro:RlpA-like_DPBB	InterPro:RlpA-like_sf	SUPFAM:SSF49590	SUPFAM:SSF50685	SignalP:SignalP-noTM	UniParc:UPI00029519D5
SEG:seg	:	:	:	:	:

Description

Expansin-like B1 [Source:GMGC_GENE;Acc:GSMUA_Achr11G00090_001]

Coordinates

chr11:-:37050..38175

Molecular Weight (calculated)

27327.4 Da

IEP (calculated)

6.639

GRAVY (calculated)

0.015

Length

254 amino acids

Sequence
(BLAST)

001: MTPSAAQLLL FSLLILGSPA TAATCSSCFS RSRAVHYPDS DRRGTETGAC EYGALGATLY GGDVSAASKL YRNGVGCGAC YLVRCTIRGY CSRDGVVVVI
101: TDHGASDSAD FILSQHAFAK MGRSASAGAA LLALGVVDVQ YRRVPCSYPK KNITFKMDHS SDFPYYFAFQ IWYQQGDRDI VAVQLCETES LTCKLVDRSH
201: GAVWAVAMPP RGPLSARMLL SGDDGDVTWL VPPNDVPEDW RAGAMYDSGI QVYS

Best Arabidopsis Sequence Match ( AT4G17030.1 )
(BLAST)

001: MKHSHVLLLL FVQVIVLLPL LCLSDDFVNS RATYYGSPDC KANPRGHCGY GEFGRDINNG EVSGVSWRLW NNGTGCGACY QVRCKIPPHC SEEGVYVVAT
101: DSGEGDGTDF ILSPKAYGRM ARPGTENQLY SFGVVNVEYQ RIPCRYAGYN LVYKIHEKSY NPHYLAILVL YVGGVNDILA VEVWQEDCKE WRRMRRVFGA
201: VHDLQNPPRG TLTLRFLVYG SAGINWIQSP NAIPADWTAG ATYDSNILLT

Arabidopsis Description

EXLB1Expansin-like protein [Source:UniProtKB/TrEMBL;Acc:Q0WRS3]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.