Factsheet for GSMUA_Achr11P22460_001

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 8
endoplasmic reticulum 5
vacuole 5
plasma membrane 5
golgi 5
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	plastid, secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr11P...	Banana	extracellular	77.74	77.44
GSMUA_Achr5P19030_001	Banana	extracellular	73.58	73.86
GSMUA_Achr5P11590_001	Banana	extracellular	68.3	69.35
GSMUA_AchrUn_...	Banana	extracellular	45.28	63.83
GSMUA_Achr1P02170_001	Banana	extracellular, peroxisome, plastid	70.57	60.91
KRH29091	Soybean	extracellular	59.25	60.62
KRH24119	Soybean	extracellular	59.25	60.15
VIT_03s0038g03430.t01	Wine grape	extracellular	58.11	59.46
PGSC0003DMT400047948	Potato	extracellular	56.6	57.69
Solyc01g112000.2.1	Tomato	extracellular	56.6	57.47
EER95568	Sorghum	extracellular	58.49	57.41
TraesCS4D01G324000.1	Wheat	extracellular	58.11	56.41
TraesCS4B01G327200.1	Wheat	extracellular	56.98	56.34
TraesCS5A01G499300.1	Wheat	nucleus	57.36	55.68
TraesCS5A01G498900.1	Wheat	extracellular	57.74	55.64
TraesCS4B01G326900.1	Wheat	extracellular	57.74	55.64
HORVU4Hr1G081990.2	Barley	extracellular	57.74	54.64
TraesCS4D01G323600.1	Wheat	extracellular	56.98	54.51
Zm00001d027520_P001	Maize	extracellular	56.98	54.32
EER99370	Sorghum	extracellular	55.85	54.01
Os07t0475400-01	Rice	extracellular	56.23	53.99
Os10t0542400-01	Rice	extracellular	55.85	53.82
KXG38992	Sorghum	extracellular	56.98	53.55
Zm00001d029783_P003	Maize	extracellular	55.47	53.45
Zm00001d006360_P001	Maize	extracellular	54.72	53.31
Zm00001d048344_P002	Maize	extracellular	55.09	53.28
AT4G38400.1	Thale cress	extracellular	53.21	53.21
CDY61895	Canola	extracellular	53.58	52.79
Bra011899.1-P	Field mustard	extracellular	53.58	52.79
TraesCS4D01G323900.1	Wheat	golgi	53.96	52.77
Bra033563.1-P	Field mustard	extracellular	52.45	52.65
CDY69288	Canola	extracellular	52.45	52.65
CDY52801	Canola	extracellular	53.21	52.42
Os03t0132200-01	Rice	extracellular, plastid	55.09	52.33
AT3G45970.1	Thale cress	extracellular	52.08	52.08
TraesCS4B01G327100.1	Wheat	golgi	53.21	52.03
TraesCS5A01G499100.1	Wheat	extracellular	49.06	52.0
AT3G45960.2	Thale cress	extracellular	51.32	51.71
CDY64278	Canola	extracellular	51.7	51.7
CDY72634	Canola	extracellular	51.7	51.7
TraesCS1B01G217200.1	Wheat	extracellular	53.58	51.64
TraesCS1A01G203200.1	Wheat	extracellular	54.34	51.06
HORVU1Hr1G052290.4	Barley	extracellular	53.21	50.9
TraesCS5A01G499200.1	Wheat	extracellular	50.19	50.57
TraesCS1D01G206700.1	Wheat	extracellular	53.96	50.53
HORVU4Hr1G081800.6	Barley	extracellular, golgi, plastid	56.98	50.5
TraesCS4D01G323800.2	Wheat	extracellular	54.72	48.01
TraesCS7A01G545900.1	Wheat	extracellular	43.77	37.54
HORVU7Hr1G119340.3	Barley	extracellular, golgi, plastid	43.77	37.54
Os06t0725300-01	Rice	endoplasmic reticulum	43.02	36.42
TraesCS7D01G532200.1	Wheat	extracellular	42.26	36.25
TraesCS7A01G545800.1	Wheat	extracellular	41.13	36.21
HORVU7Hr1G119220.1	Barley	extracellular, golgi, plastid	42.26	35.78
TraesCS7B01G468700.1	Wheat	endoplasmic reticulum, extracellular	42.26	35.44
TraesCSU01G099200.1	Wheat	endoplasmic reticulum, extracellular	40.75	35.06
TraesCS7D01G532400.1	Wheat	extracellular	40.75	35.06
TraesCS7D01G532500.1	Wheat	extracellular	42.26	34.89
TraesCS7A01G546000.1	Wheat	endoplasmic reticulum, extracellular	42.26	34.67
HORVU7Hr1G119200.1	Barley	golgi, plastid, vacuole	41.13	34.49
GSMUA_AchrUn_...	Banana	extracellular	32.83	34.25
Zm00001d014826_P001	Maize	endoplasmic reticulum, extracellular, vacuole	40.75	33.86
TraesCSU01G099100.1	Wheat	extracellular, golgi	39.62	33.65
TraesCS7A01G546300.1	Wheat	endoplasmic reticulum, extracellular	40.75	33.64
TraesCS7B01G469200.1	Wheat	endoplasmic reticulum, extracellular	40.38	33.54
GSMUA_Achr11P...	Banana	extracellular	31.32	32.68
GSMUA_AchrUn_...	Banana	extracellular	10.94	31.52
GSMUA_Achr2P13740_001	Banana	extracellular	27.92	28.24
GSMUA_AchrUn_...	Banana	extracellular	27.92	28.03
GSMUA_Achr2P13750_001	Banana	extracellular	27.55	27.97
GSMUA_Achr2P13730_001	Banana	extracellular	27.17	27.48
GSMUA_Achr7P07040_001	Banana	extracellular	28.68	27.05
GSMUA_Achr4P26910_001	Banana	extracellular	27.17	26.47
GSMUA_Achr2P11930_001	Banana	extracellular	16.23	26.38
KXG20919	Sorghum	plastid	42.26	25.28
GSMUA_AchrUn_...	Banana	extracellular	24.91	25.1
GSMUA_AchrUn_...	Banana	extracellular	16.23	23.89
GSMUA_Achr1P00120_001	Banana	extracellular	23.77	23.68
GSMUA_Achr5P12080_001	Banana	extracellular	23.4	23.22
GSMUA_Achr5P12710_001	Banana	extracellular, nucleus, plasma membrane	27.55	22.88
TraesCS7B01G469100.1	Wheat	endoplasmic reticulum, extracellular, plasma membrane	42.26	17.39

Protein Annotations

Gene3D:2.40.40.10	Gene3D:2.60.40.760	MapMan:21.4.2.2	InterPro:Expan_Lol_pI	InterPro:Expansin/allergen_DPBB_dom	InterPro:Expansin_CBD
InterPro:Expansin_CBD_sf	GO:GO:0005575	GO:GO:0005576	EnsemblPlantsGene:GSMUA_Achr11G22460_001	EnsemblPlants:GSMUA_Achr11P22460_001	EnsemblPlants:GSMUA_Achr11T22460_001
InterPro:IPR007112	InterPro:IPR007117	InterPro:IPR036749	InterPro:IPR036908	UniProt:M0RUH6	PFAM:PF01357
PFAM:PF03330	PRINTS:PR01225	PFscan:PS50842	PFscan:PS50843	PANTHER:PTHR31692	PANTHER:PTHR31692:SF4
InterPro:RlpA-like_DPBB	InterPro:RlpA-like_sf	SMART:SM00837	SUPFAM:SSF49590	SUPFAM:SSF50685	SignalP:SignalP-noTM
TMHMM:TMhelix	UniParc:UPI000295F368	SEG:seg	:	:	:

Description

Expansin-like A1 [Source:GMGC_GENE;Acc:GSMUA_Achr11G22460_001]

Coordinates

chr11:-:22758053..22759334

Molecular Weight (calculated)

28842.6 Da

IEP (calculated)

8.553

GRAVY (calculated)

-0.067

Length

265 amino acids

Sequence
(BLAST)

001: MLHLAPHMGG DTVFTFFLLF LFISYATARD RCVHQSKAAY SSSSGLSVGA CGYGSMALGF NGGYTAAGSS TLHRGGVGCG ACFQIRCKNT SVCGTEGVSV
101: ILTDLNKSNH TDFVLGDPAF MAMARNGKEQ ELKKLGILDV EYKRIPCEYK NRNLSVRVEE SSRSPSHLAI KFLYQGGQTD MVAVDVAQVG SPNWRFMRRD
201: YGPVWSISRA PVGPLQLRMV VTGGYGGRWV WAQKAVLPAE WTTGSVYDLG VQITDIAREG CRIEE

Best Arabidopsis Sequence Match ( AT3G45970.1 )
(BLAST)

001: MGSFLFLIVV IFLFSSSVNA CDRCLHRSKA AYFSSASALS SGACAYGSMA TSFFAGHIAA AIPSIYKDGA GCGACFQVRC KNPKLCSTKG TIVMITDLNK
101: SNQTDLVLSS RAFRAMAKPI VGADKDLLKQ GIVDIEYQRV PCDYGNKNMN VRVEEASKKP NYLEIKLLYQ GGQTEVVSID IAQVGSSPNW GYMTRSHGAV
201: WVTDKVPTGA IQFRFVVTGG YDGKMIWSQS VLPSNWEAGK IYDAGVQITD IAQEGCDPCD AHIWN

Arabidopsis Description

EXLA1Expansin-like A1 [Source:UniProtKB/Swiss-Prot;Acc:Q9LZT4]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.