Factsheet for HORVU1Hr1G052290.4

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

plastid 1
extracellular 4
endoplasmic reticulum 2
vacuole 2
plasma membrane 2
golgi 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	plastid, secretory
ChloroP:	plastid
iPSORT:	secretory
MultiLoc:	extracellular
TargetP:	secretory
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1B01G217200.1	Wheat	extracellular	90.97	91.64
TraesCS1D01G206700.1	Wheat	extracellular	91.34	89.4
TraesCS1A01G203200.1	Wheat	extracellular	90.97	89.36
Zm00001d029783_P003	Maize	extracellular	71.48	72.0
Os10t0542400-01	Rice	extracellular	70.76	71.27
KXG38992	Sorghum	extracellular	71.84	70.57
HORVU4Hr1G081990.2	Barley	extracellular	66.43	65.71
HORVU4Hr1G081800.6	Barley	extracellular, golgi, plastid	64.98	60.2
GSMUA_Achr11P...	Banana	extracellular	54.87	57.14
GSMUA_Achr5P19030_001	Banana	extracellular	54.15	56.82
GSMUA_Achr5P11590_001	Banana	extracellular	52.71	55.94
Solyc01g112000.2.1	Tomato	extracellular	51.26	54.41
PGSC0003DMT400047948	Potato	extracellular	50.54	53.85
VIT_03s0038g03430.t01	Wine grape	extracellular	49.82	53.28
GSMUA_Achr11P...	Banana	extracellular	50.9	53.21
CDY69288	Canola	extracellular	49.46	51.89
Bra033563.1-P	Field mustard	extracellular	49.46	51.89
KRH29091	Soybean	extracellular	47.65	50.97
KRH24119	Soybean	extracellular	48.01	50.96
AT4G38400.1	Thale cress	extracellular	48.74	50.94
GSMUA_AchrUn_...	Banana	extracellular	34.3	50.53
GSMUA_Achr1P02170_001	Banana	extracellular, peroxisome, plastid	55.96	50.49
CDY64278	Canola	extracellular	48.01	50.19
CDY72634	Canola	extracellular	48.01	50.19
CDY52801	Canola	extracellular	48.74	50.19
CDY61895	Canola	extracellular	48.38	49.81
Bra011899.1-P	Field mustard	extracellular	48.38	49.81
AT3G45970.1	Thale cress	extracellular	47.65	49.81
AT3G45960.2	Thale cress	extracellular	46.57	49.05
HORVU7Hr1G119340.3	Barley	extracellular, golgi, plastid	45.85	41.1
HORVU7Hr1G119200.1	Barley	golgi, plastid, vacuole	44.04	38.61
HORVU7Hr1G119220.1	Barley	extracellular, golgi, plastid	40.79	36.1
HORVU6Hr1G060410.7	Barley	extracellular	27.44	28.36
HORVU2Hr1G013360.1	Barley	extracellular	24.55	27.09
HORVU2Hr1G097510.1	Barley	extracellular, mitochondrion, plastid	26.71	26.62
HORVU2Hr1G097480.1	Barley	extracellular	26.71	26.15
HORVU6Hr1G055090.1	Barley	extracellular	25.27	26.12
HORVU0Hr1G016410.1	Barley	extracellular	26.71	25.78
HORVU6Hr1G063180.1	Barley	extracellular	26.71	25.78
HORVU2Hr1G013380.1	Barley	cytosol, extracellular, mitochondrion	22.02	25.74
HORVU3Hr1G105170.1	Barley	plastid	23.83	25.1
HORVU3Hr1G073140.1	Barley	plastid	23.83	25.1
HORVU0Hr1G018320.1	Barley	extracellular	25.99	24.91
HORVU0Hr1G016380.2	Barley	extracellular	23.83	24.91
HORVU3Hr1G105180.1	Barley	extracellular	26.35	23.86
HORVU3Hr1G073120.1	Barley	extracellular	26.35	23.86
HORVU2Hr1G013340.1	Barley	extracellular	24.91	23.63
HORVU3Hr1G001920.2	Barley	extracellular	23.83	23.49
HORVU2Hr1G097490.1	Barley	plastid	26.35	23.47
HORVU3Hr1G076110.1	Barley	cytosol, extracellular	11.19	22.46
HORVU1Hr1G053300.1	Barley	extracellular	22.38	22.38
HORVU0Hr1G005490.1	Barley	extracellular	22.38	21.68
HORVU4Hr1G086830.1	Barley	extracellular	20.58	21.43
HORVU4Hr1G086930.1	Barley	extracellular	20.94	21.17
HORVU6Hr1G005760.1	Barley	extracellular	21.3	20.7
HORVU1Hr1G054210.1	Barley	extracellular	20.22	20.66
HORVU4Hr1G087070.2	Barley	extracellular, mitochondrion, peroxisome	20.94	20.64
HORVU3Hr1G105520.1	Barley	extracellular	24.91	20.0
HORVU1Hr1G054240.2	Barley	plastid	22.74	19.87
HORVU6Hr1G005810.3	Barley	extracellular	21.66	19.8
HORVU5Hr1G019100.1	Barley	extracellular, plasma membrane	24.91	19.55
HORVU4Hr1G088080.4	Barley	plastid	23.47	16.13
HORVU5Hr1G092910.9	Barley	plastid	23.83	15.94
HORVU4Hr1G088140.3	Barley	extracellular	16.97	14.6

Protein Annotations

Gene3D:2.40.40.10	Gene3D:2.60.40.760	MapMan:21.4.2.2	UniProt:A0A287FKK5	InterPro:Expan_Lol_pI	InterPro:Expansin/allergen_DPBB_dom
InterPro:Expansin_CBD	InterPro:Expansin_CBD_sf	GO:GO:0005575	GO:GO:0005576	EnsemblPlantsGene:HORVU1Hr1G052290	EnsemblPlants:HORVU1Hr1G052290.4
InterPro:IPR007112	InterPro:IPR007117	InterPro:IPR036749	InterPro:IPR036908	PFAM:PF01357	PFAM:PF03330
PRINTS:PR01225	PFscan:PS50842	PFscan:PS50843	PANTHER:PTHR31692	PANTHER:PTHR31692:SF53	InterPro:RlpA-like_DPBB
InterPro:RlpA-like_sf	SUPFAM:SSF49590	SUPFAM:SSF50685	SignalP:SignalP-noTM	UniParc:UPI000B46886E	SEG:seg

Description

No Description!

Coordinates

chrchr1H:-:387687632..387688563

Molecular Weight (calculated)

29124.6 Da

IEP (calculated)

9.780

GRAVY (calculated)

-0.114

Length

277 amino acids

Sequence
(BLAST)

001: APSMASARSR LVLLLVLFAA ASSPASACDR CVRRSNAAYR ASSPALDNGS CGYGSLAATF NGGLLAAASP ALYRGGVGCG ACYRVRCTDA ELCSAAGTTV
101: VVTDQVRTGA TNRTDLVLSG AAYAAMARGG GGTAAARRLR ERRAVGVEYK RVPCEYARRR NLSVRVEERA AGGLTIRFLY QGGQTDIVAV DVAAAGSSGW
201: RSMTRERGGP AWSTGQAPTG PLQLRMVVTG GYDGKWVWAD REVLPRRWTA GRVYDTGVQI ADVALEGCSP CDTREWK

Best Arabidopsis Sequence Match ( AT3G45960.1 )
(BLAST)

001: MATSFFAGHI AAAIPSIYKD GAGCGACFQV RCKNPKLCNS KGTIVMVTDL NTSNQTDLVL SSRAFRAMAK PVVGVDKYLL KQGIVDVEYQ RVPCNYGKRN
101: LNVRVEEASK KPNYLAIKLL YQGGQTEVVG IDIAPVGSSQ WSYMSRSHGA VWATDKVPTG ALQFKFTVTG GYDGKTVWSK RVLPANWNSG RIYDAGVQIT
201: DIAQEGCDTC GHIWN

Arabidopsis Description

EXLA3Expansin-like A3 [Source:UniProtKB/Swiss-Prot;Acc:Q9LZT5]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.