Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 4
- extracellular 3
- cytosol 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1A01G212400.1 | Wheat | extracellular | 82.33 | 98.49 |
| TraesCS1D01G215400.1 | Wheat | extracellular | 82.02 | 98.48 |
| TraesCS1B01G226000.2 | Wheat | extracellular | 82.33 | 96.67 |
| Os10t0555900-02 | Rice | extracellular | 68.14 | 80.6 |
| EER91942 | Sorghum | extracellular | 66.88 | 79.7 |
| Zm00001d047090_P002 | Maize | extracellular | 67.19 | 78.89 |
| Zm00001d029906_P001 | Maize | extracellular | 65.93 | 77.99 |
| Zm00001d029903_P002 | Maize | extracellular | 65.3 | 77.53 |
| Zm00001d047089_P001 | Maize | extracellular | 64.98 | 77.15 |
| OQU92157 | Sorghum | extracellular | 66.56 | 68.51 |
| OQU92156 | Sorghum | plastid | 68.14 | 66.46 |
| HORVU6Hr1G055090.1 | Barley | extracellular | 55.84 | 66.04 |
| HORVU3Hr1G076110.1 | Barley | cytosol, extracellular | 28.39 | 65.22 |
| KXG38933 | Sorghum | mitochondrion | 65.62 | 65.2 |
| HORVU3Hr1G105170.1 | Barley | plastid | 51.42 | 61.98 |
| HORVU3Hr1G073140.1 | Barley | plastid | 51.42 | 61.98 |
| EES05315 | Sorghum | extracellular | 61.83 | 61.64 |
| Zm00001d004586_P001 | Maize | extracellular | 60.57 | 61.34 |
| HORVU3Hr1G001920.2 | Barley | extracellular | 52.68 | 59.43 |
| HORVU6Hr1G005760.1 | Barley | extracellular | 51.73 | 57.54 |
| HORVU6Hr1G005810.3 | Barley | extracellular | 53.31 | 55.78 |
| HORVU1Hr1G054210.1 | Barley | extracellular | 47.63 | 55.72 |
| HORVU3Hr1G073120.1 | Barley | extracellular | 53.63 | 55.56 |
| HORVU3Hr1G105180.1 | Barley | extracellular | 53.63 | 55.56 |
| HORVU3Hr1G105520.1 | Barley | extracellular | 55.2 | 50.72 |
| HORVU0Hr1G016380.2 | Barley | extracellular | 41.96 | 50.19 |
| HORVU2Hr1G013380.1 | Barley | cytosol, extracellular, mitochondrion | 37.22 | 49.79 |
| GSMUA_AchrUn_... | Banana | extracellular | 14.2 | 48.91 |
| HORVU5Hr1G019100.1 | Barley | extracellular, plasma membrane | 53.94 | 48.44 |
| HORVU1Hr1G053300.1 | Barley | extracellular | 41.96 | 48.01 |
| HORVU2Hr1G013360.1 | Barley | extracellular | 37.85 | 47.81 |
| HORVU4Hr1G086830.1 | Barley | extracellular | 39.12 | 46.62 |
| HORVU0Hr1G016410.1 | Barley | extracellular | 40.38 | 44.6 |
| HORVU6Hr1G063180.1 | Barley | extracellular | 40.38 | 44.6 |
| HORVU4Hr1G086930.1 | Barley | extracellular | 38.49 | 44.53 |
| HORVU2Hr1G097480.1 | Barley | extracellular | 39.75 | 44.52 |
| HORVU2Hr1G097510.1 | Barley | extracellular, mitochondrion, plastid | 38.8 | 44.24 |
| HORVU4Hr1G087070.2 | Barley | extracellular, mitochondrion, peroxisome | 39.12 | 44.13 |
| HORVU0Hr1G005490.1 | Barley | extracellular | 39.43 | 43.71 |
| HORVU4Hr1G088080.4 | Barley | plastid | 55.52 | 43.67 |
| HORVU0Hr1G018320.1 | Barley | extracellular | 39.43 | 43.25 |
| HORVU2Hr1G013340.1 | Barley | extracellular | 37.22 | 40.41 |
| HORVU2Hr1G097490.1 | Barley | plastid | 37.22 | 37.94 |
| HORVU4Hr1G088140.3 | Barley | extracellular | 38.17 | 37.58 |
| HORVU6Hr1G060410.7 | Barley | extracellular | 29.97 | 35.45 |
| HORVU5Hr1G092910.9 | Barley | plastid | 39.43 | 30.19 |
| HORVU4Hr1G081990.2 | Barley | extracellular | 21.77 | 24.64 |
| HORVU4Hr1G081800.6 | Barley | extracellular, golgi, plastid | 22.08 | 23.41 |
| HORVU1Hr1G052290.4 | Barley | extracellular | 19.87 | 22.74 |
| HORVU7Hr1G119340.3 | Barley | extracellular, golgi, plastid | 19.87 | 20.39 |
| HORVU7Hr1G119200.1 | Barley | golgi, plastid, vacuole | 19.87 | 19.94 |
| HORVU7Hr1G119220.1 | Barley | extracellular, golgi, plastid | 18.93 | 19.17 |
Protein Annotations
| Gene3D:2.40.40.10 | Gene3D:2.60.40.760 | MapMan:35.1 | InterPro:Expan_Lol_pI | InterPro:Expansin/allergen_DPBB_dom | InterPro:Expansin_CBD |
| InterPro:Expansin_CBD_sf | GO:GO:0000003 | GO:GO:0005575 | GO:GO:0005576 | GO:GO:0008150 | GO:GO:0019953 |
| EnsemblPlantsGene:HORVU1Hr1G054240 | EnsemblPlants:HORVU1Hr1G054240.2 | InterPro:IPR007112 | InterPro:IPR007117 | InterPro:IPR036749 | InterPro:IPR036908 |
| InterPro:LolPI | UniProt:M0YKC6 | PFAM:PF01357 | PFAM:PF03330 | PRINTS:PR00829 | PRINTS:PR01225 |
| PFscan:PS50842 | PFscan:PS50843 | PANTHER:PTHR31692 | PANTHER:PTHR31692:SF17 | InterPro:RlpA-like_DPBB | InterPro:RlpA-like_sf |
| SMART:SM00837 | SUPFAM:SSF49590 | SUPFAM:SSF50685 | UniParc:UPI000294C1B6 | SEG:seg | : |
Description
No Description!
Coordinates
chrchr1H:-:401043537..401045363
Molecular Weight (calculated)
34551.6 Da
IEP (calculated)
5.661
GRAVY (calculated)
-0.293
Length
317 amino acids
Sequence
(BLAST)
(BLAST)
001: MAIASPGTAP AYKYPGNMLL PEHQSIAQPS NPAWSVRWYT TPTSLKKQRC FDMAPLSSKA VALVALSSLL VTYAAAGAGT FNDSAFTADP NWEDARATWY
101: GAPTGAGPMD DGGACGFKNT NQYPFSSMTS CGNEPIFKDG KGCGSCYQIR CTNDQSCSGN PETVVITDMN YYPVAKYHFD LSGTAFGAMA KPGLSEKLRH
201: SGIIDIQFKR VPCEFPGLKV TFHVEQGSNP VYFAVLVEYE DGDGDVVQVD LMEANSGTWT PMRESWGSIW RLDSGHRLQA PFSMRITNES GKTLVADKVI
301: PANWEPSTFY RSIVQYS
101: GAPTGAGPMD DGGACGFKNT NQYPFSSMTS CGNEPIFKDG KGCGSCYQIR CTNDQSCSGN PETVVITDMN YYPVAKYHFD LSGTAFGAMA KPGLSEKLRH
201: SGIIDIQFKR VPCEFPGLKV TFHVEQGSNP VYFAVLVEYE DGDGDVVQVD LMEANSGTWT PMRESWGSIW RLDSGHRLQA PFSMRITNES GKTLVADKVI
301: PANWEPSTFY RSIVQYS
001: MTILVVDRYY MLMNLLFALT CLLLNLTHCF SPKKFNISAA TTSDSDWSIA GSTWYGNPTG YGSDGGACGY GNAVAQPPFS KMVSAGGPSL FKSGKGCGAC
101: YQVKCTSKSA CSKNPVTVVI TDECPGCVKE SVHFDLSGTA FGAMAISGQD SQLRNVGELQ ILYKKVECNY IGKTVTFQVD KGSNANSFAV LVAYVNGDGE
201: IGRIELKQAL DSDKWLSMSQ SWGAVWKLDV SSPLRAPLSL RVTSLESGKT VVASNVIPAN WQPGAIYKSN VNF
101: YQVKCTSKSA CSKNPVTVVI TDECPGCVKE SVHFDLSGTA FGAMAISGQD SQLRNVGELQ ILYKKVECNY IGKTVTFQVD KGSNANSFAV LVAYVNGDGE
201: IGRIELKQAL DSDKWLSMSQ SWGAVWKLDV SSPLRAPLSL RVTSLESGKT VVASNVIPAN WQPGAIYKSN VNF
Arabidopsis Description
EXPB2Putative expansin-B2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SHY6]
SUBAcon: [extracellular]
SUBAcon: [extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.