Factsheet for TraesCS1D01G215400.1

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 7
endoplasmic reticulum 4
vacuole 4
plasma membrane 4
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1A01G212400.1	Wheat	extracellular	99.62	99.25
TraesCS1B01G226000.2	Wheat	extracellular	99.62	97.41
HORVU1Hr1G054240.2	Barley	plastid	98.48	82.02
Os10t0555900-02	Rice	extracellular	82.95	81.72
EER91942	Sorghum	extracellular	80.68	80.08
Zm00001d047090_P002	Maize	extracellular	81.06	79.26
Zm00001d029903_P002	Maize	extracellular	79.55	78.65
Zm00001d029906_P001	Maize	extracellular	79.55	78.36
Zm00001d047089_P001	Maize	extracellular	79.17	78.28
OQU92157	Sorghum	extracellular	80.3	68.83
OQU92156	Sorghum	plastid	81.82	66.46
TraesCS1D01G215300.1	Wheat	extracellular	68.56	66.06
TraesCS3D01G000400.1	Wheat	cytosol	50.38	65.52
KXG38933	Sorghum	mitochondrion	78.41	64.89
TraesCS3D01G000500.1	Wheat	extracellular	65.53	63.14
TraesCS6D01G037700.1	Wheat	extracellular	65.15	63.0
TraesCS1D01G215100.1	Wheat	plastid	67.42	62.9
TraesCS6D01G037500.1	Wheat	extracellular	64.77	62.64
EES05315	Sorghum	extracellular	75.0	62.26
Zm00001d004586_P001	Maize	extracellular	73.48	61.98
TraesCS6D01G198400.1	Wheat	extracellular	69.7	61.54
TraesCS6D01G037600.1	Wheat	mitochondrion	26.89	61.21
TraesCS4D01G361900.1	Wheat	extracellular	68.56	60.94
TraesCS1D01G215500.1	Wheat	extracellular	72.35	60.63
TraesCS3D01G476800.1	Wheat	extracellular	42.8	58.25
TraesCS3D01G476700.1	Wheat	extracellular	65.15	56.03
TraesCS3D01G474800.1	Wheat	extracellular	65.15	54.78
TraesCS4D01G361700.1	Wheat	extracellular	65.53	54.75
TraesCS1D01G211500.1	Wheat	extracellular	51.52	51.32
TraesCS5D01G086000.1	Wheat	extracellular, plasma membrane	67.05	51.01
TraesCS1D01G215200.1	Wheat	extracellular, mitochondrion, nucleus, plastid	60.23	50.64
GSMUA_AchrUn_...	Banana	extracellular	17.05	48.91
TraesCS6D01G231400.1	Wheat	extracellular	48.86	48.5
TraesCS2D01G078900.1	Wheat	extracellular	46.59	48.43
TraesCS2D01G411000.1	Wheat	extracellular	47.73	48.09
TraesCS2D01G592900.1	Wheat	extracellular	44.7	47.39
TraesCS2D01G411200.1	Wheat	extracellular	46.59	47.13
TraesCS2D01G104800.1	Wheat	extracellular	45.08	46.85
TraesCS2D01G459300.1	Wheat	extracellular	46.97	46.79
TraesCS4D01G355800.1	Wheat	extracellular	47.35	46.3
TraesCS4D01G355100.1	Wheat	extracellular	47.35	46.3
TraesCS2D01G078800.1	Wheat	extracellular	44.32	46.06
TraesCS6D01G231200.1	Wheat	extracellular	50.0	45.99
TraesCS4D01G355700.1	Wheat	extracellular	46.59	45.9
TraesCS2D01G078600.1	Wheat	extracellular	41.29	45.61
TraesCS6D01G231300.1	Wheat	extracellular	48.86	44.64
TraesCS3D01G482800.1	Wheat	extracellular	48.11	44.1
TraesCS2D01G411100.1	Wheat	extracellular, plastid	43.18	40.57
TraesCS5D01G384200.1	Wheat	extracellular	45.45	38.96
TraesCS6D01G218500.1	Wheat	extracellular	36.36	35.82
TraesCS2D01G369200.2	Wheat	extracellular	35.23	33.33
TraesCS4D01G323900.1	Wheat	golgi	26.52	25.83
TraesCS4D01G323600.1	Wheat	extracellular	26.89	25.63
TraesCS4D01G324000.1	Wheat	extracellular	26.14	25.27
TraesCS1D01G206700.1	Wheat	extracellular	25.0	23.32
TraesCS4D01G323800.2	Wheat	extracellular	24.62	21.52
TraesCS7D01G532400.1	Wheat	extracellular	21.97	18.83
TraesCS7D01G532200.1	Wheat	extracellular	21.97	18.77
TraesCS7D01G532500.1	Wheat	extracellular	22.35	18.38

Protein Annotations

Gene3D:2.40.40.10	Gene3D:2.60.40.760	MapMan:35.1	InterPro:Expan_Lol_pI	InterPro:Expansin/allergen_DPBB_dom	InterPro:Expansin_CBD
InterPro:Expansin_CBD_sf	GO:GO:0000003	GO:GO:0005575	GO:GO:0005576	GO:GO:0008150	GO:GO:0019953
InterPro:IPR007112	InterPro:IPR007117	InterPro:IPR036749	InterPro:IPR036908	InterPro:LolPI	PFAM:PF01357
PFAM:PF03330	PRINTS:PR00829	PRINTS:PR01225	PFscan:PS50842	PFscan:PS50843	PANTHER:PTHR31692
PANTHER:PTHR31692:SF17	InterPro:RlpA-like_DPBB	InterPro:RlpA-like_sf	SMART:SM00837	SUPFAM:SSF49590	SUPFAM:SSF50685
SignalP:SignalP-noTM	EnsemblPlantsGene:TraesCS1D01G215400	EnsemblPlants:TraesCS1D01G215400.1	SEG:seg	:	:

Description

No Description!

Coordinates

chr1D:-:300718039..300719324

Molecular Weight (calculated)

28688.5 Da

IEP (calculated)

4.763

GRAVY (calculated)

-0.248

Length

264 amino acids

Sequence
(BLAST)

001: MAPLSSKAVA LVALFSLLVT YAAGAGNFND SAFTADPNWE DARATWYGAP TGAGPDDDGG ACGFKNTNQY PFSSMTSCGN EPIFKDGKGC GSCYQIRCTN
101: DQSCSGNPET VVITDMNYYP VAKYHFDLSG TAFGAMAKPG LSEKLRHSGI IDIQFKRVPC EFPGLKVTFH VEQGSNPVYF AVLVEYEDGD GDVVQVDLME
201: ANSGTWTPMR ESWGSIWRLD SGHRLQAPFS MRITNESGKT LVADKVIPAN WAPSTFYRSI VQYS

Best Arabidopsis Sequence Match ( AT1G65680.1 )
(BLAST)

001: MTILVVDRYY MLMNLLFALT CLLLNLTHCF SPKKFNISAA TTSDSDWSIA GSTWYGNPTG YGSDGGACGY GNAVAQPPFS KMVSAGGPSL FKSGKGCGAC
101: YQVKCTSKSA CSKNPVTVVI TDECPGCVKE SVHFDLSGTA FGAMAISGQD SQLRNVGELQ ILYKKVECNY IGKTVTFQVD KGSNANSFAV LVAYVNGDGE
201: IGRIELKQAL DSDKWLSMSQ SWGAVWKLDV SSPLRAPLSL RVTSLESGKT VVASNVIPAN WQPGAIYKSN VNF

Arabidopsis Description

EXPB2Putative expansin-B2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SHY6]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.