Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- extracellular 7
- endoplasmic reticulum 5
- vacuole 5
- plasma membrane 6
- golgi 5
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d029906_P001 | Maize | extracellular | 79.22 | 91.04 |
| EER91942 | Sorghum | extracellular | 76.95 | 89.1 |
| Os10t0555900-02 | Rice | extracellular | 70.78 | 81.34 |
| TraesCS1A01G212400.1 | Wheat | extracellular | 69.16 | 80.38 |
| TraesCS1D01G215400.1 | Wheat | extracellular | 68.83 | 80.3 |
| TraesCS1B01G226000.2 | Wheat | extracellular | 68.83 | 78.52 |
| OQU92156 | Sorghum | plastid | 80.19 | 76.0 |
| KXG38933 | Sorghum | mitochondrion | 76.3 | 73.67 |
| EES05315 | Sorghum | extracellular | 72.4 | 70.13 |
| HORVU1Hr1G054240.2 | Barley | plastid | 68.51 | 66.56 |
| EER91947 | Sorghum | extracellular | 56.49 | 64.68 |
| EER94500 | Sorghum | extracellular | 60.39 | 64.14 |
| EER94506 | Sorghum | extracellular | 58.44 | 63.83 |
| EER91949 | Sorghum | extracellular | 58.44 | 63.83 |
| KXG40416 | Sorghum | extracellular, vacuole | 64.29 | 61.88 |
| KXG40417 | Sorghum | mitochondrion | 59.09 | 61.28 |
| EER91945 | Sorghum | extracellular | 53.9 | 60.14 |
| OQU93456 | Sorghum | cytosol, extracellular | 38.31 | 55.66 |
| KXG38969 | Sorghum | extracellular | 47.08 | 54.51 |
| EER94537 | Sorghum | extracellular | 46.75 | 54.14 |
| KXG38972 | Sorghum | extracellular | 46.75 | 54.14 |
| EER91948 | Sorghum | extracellular | 47.4 | 52.52 |
| OQU93455 | Sorghum | extracellular | 42.53 | 51.17 |
| OQU93459 | Sorghum | extracellular | 42.86 | 49.62 |
| EER95683 | Sorghum | extracellular | 42.53 | 49.25 |
| OQU93457 | Sorghum | extracellular | 42.53 | 49.25 |
| OQU93458 | Sorghum | extracellular | 42.53 | 49.25 |
| GSMUA_AchrUn_... | Banana | extracellular | 14.61 | 48.91 |
| EER95684 | Sorghum | extracellular | 42.21 | 48.87 |
| EES07509 | Sorghum | extracellular | 41.88 | 48.86 |
| EES11234 | Sorghum | extracellular | 41.23 | 48.29 |
| EES07508 | Sorghum | extracellular | 45.78 | 47.96 |
| EES05780 | Sorghum | extracellular | 45.45 | 47.46 |
| EER88254 | Sorghum | extracellular | 39.61 | 47.1 |
| KXG19818 | Sorghum | extracellular | 39.61 | 47.1 |
| EES11235 | Sorghum | extracellular | 41.88 | 44.33 |
| EES11233 | Sorghum | extracellular | 40.58 | 43.4 |
| EER98447 | Sorghum | extracellular | 41.56 | 41.69 |
| EER98449 | Sorghum | extracellular | 42.21 | 41.67 |
| EER93754 | Sorghum | extracellular | 40.26 | 40.52 |
| KXG37946 | Sorghum | extracellular | 41.88 | 39.69 |
| EES05488 | Sorghum | extracellular | 34.42 | 38.83 |
| EER95568 | Sorghum | extracellular | 24.03 | 27.41 |
| EER99370 | Sorghum | extracellular | 22.08 | 24.82 |
| KXG38992 | Sorghum | extracellular | 21.1 | 23.05 |
| OQU89980 | Sorghum | extracellular, plasma membrane, vacuole | 14.61 | 20.0 |
| KXG20919 | Sorghum | plastid | 20.45 | 14.22 |
Protein Annotations
| Gene3D:2.40.40.10 | Gene3D:2.60.40.760 | MapMan:35.1 | UniProt:A0A1Z5S8B7 | InterPro:Expan_Lol_pI | InterPro:Expansin/allergen_DPBB_dom |
| InterPro:Expansin_CBD | InterPro:Expansin_CBD_sf | GO:GO:0000003 | GO:GO:0005575 | GO:GO:0005576 | GO:GO:0008150 |
| GO:GO:0019953 | InterPro:IPR007112 | InterPro:IPR007117 | InterPro:IPR036749 | InterPro:IPR036908 | InterPro:LolPI |
| EnsemblPlants:OQU92157 | ProteinID:OQU92157 | ProteinID:OQU92157.1 | PFAM:PF01357 | PFAM:PF03330 | PRINTS:PR00829 |
| PRINTS:PR01225 | PFscan:PS50842 | PFscan:PS50843 | PANTHER:PTHR31692 | PANTHER:PTHR31692:SF17 | InterPro:RlpA-like_DPBB |
| InterPro:RlpA-like_sf | SMART:SM00837 | EnsemblPlantsGene:SORBI_3001G300900 | SUPFAM:SSF49590 | SUPFAM:SSF50685 | SignalP:SignalP-noTM |
| TMHMM:TMhelix | UniParc:UPI000B8BA20F | SEG:seg | : | : | : |
Description
hypothetical protein
Coordinates
chr1:+:58244005..58250989
Molecular Weight (calculated)
33465.4 Da
IEP (calculated)
6.156
GRAVY (calculated)
-0.086
Length
308 amino acids
Sequence
(BLAST)
(BLAST)
001: MATLSSTVVA LALGALLFLL LATCGSCAIP ASFNVSDFTA DPNWEAARAT WYGAPTGAGP DDNGGACGFK NVNLPPFSAM TSCGNEPLFK DGKGCGSCYQ
101: IRCQQHPACS GNPETVIITD MNYYPVAKYH FDLSGTAFGA MAKPGRNDEL RHAGIIDIQF KRVPCYYPGQ KVTFHVEVGS NPVYFAVLVE FEDGDGDVVQ
201: VDLMEANSGS WTPMRESWGS IWRLDSDHRL TAPFSLRITN ESGKTLVANQ VIPANWTPNT YYRSMVQYNW LSAAAHHNNS VSSHHNNSVS LWLISLVLVS
301: YCCMGPSH
101: IRCQQHPACS GNPETVIITD MNYYPVAKYH FDLSGTAFGA MAKPGRNDEL RHAGIIDIQF KRVPCYYPGQ KVTFHVEVGS NPVYFAVLVE FEDGDGDVVQ
201: VDLMEANSGS WTPMRESWGS IWRLDSDHRL TAPFSLRITN ESGKTLVANQ VIPANWTPNT YYRSMVQYNW LSAAAHHNNS VSSHHNNSVS LWLISLVLVS
301: YCCMGPSH
001: MTILVVDRYY MLMNLLFALT CLLLNLTHCF SPKKFNISAA TTSDSDWSIA GSTWYGNPTG YGSDGGACGY GNAVAQPPFS KMVSAGGPSL FKSGKGCGAC
101: YQVKCTSKSA CSKNPVTVVI TDECPGCVKE SVHFDLSGTA FGAMAISGQD SQLRNVGELQ ILYKKVECNY IGKTVTFQVD KGSNANSFAV LVAYVNGDGE
201: IGRIELKQAL DSDKWLSMSQ SWGAVWKLDV SSPLRAPLSL RVTSLESGKT VVASNVIPAN WQPGAIYKSN VNF
101: YQVKCTSKSA CSKNPVTVVI TDECPGCVKE SVHFDLSGTA FGAMAISGQD SQLRNVGELQ ILYKKVECNY IGKTVTFQVD KGSNANSFAV LVAYVNGDGE
201: IGRIELKQAL DSDKWLSMSQ SWGAVWKLDV SSPLRAPLSL RVTSLESGKT VVASNVIPAN WQPGAIYKSN VNF
Arabidopsis Description
EXPB2Putative expansin-B2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SHY6]
SUBAcon: [extracellular]
SUBAcon: [extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.