Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- extracellular 9
- endoplasmic reticulum 5
- vacuole 5
- plasma membrane 5
- golgi 5
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EER91949 | Sorghum | extracellular | 99.29 | 99.29 |
| Zm00001d047096_P001 | Maize | extracellular | 90.78 | 90.78 |
| EER91942 | Sorghum | extracellular | 64.89 | 68.8 |
| EER91947 | Sorghum | extracellular | 62.06 | 65.06 |
| EER91945 | Sorghum | extracellular | 62.77 | 64.13 |
| OQU92157 | Sorghum | extracellular | 63.83 | 58.44 |
| EER94500 | Sorghum | extracellular | 58.87 | 57.24 |
| KXG40416 | Sorghum | extracellular, vacuole | 64.18 | 56.56 |
| KXG38933 | Sorghum | mitochondrion | 63.12 | 55.8 |
| EES05315 | Sorghum | extracellular | 62.77 | 55.66 |
| EER91948 | Sorghum | extracellular | 54.26 | 55.04 |
| OQU92156 | Sorghum | plastid | 62.77 | 54.46 |
| OQU93456 | Sorghum | cytosol, extracellular | 40.07 | 53.3 |
| KXG38969 | Sorghum | extracellular | 49.65 | 52.63 |
| EER94537 | Sorghum | extracellular | 49.29 | 52.26 |
| KXG38972 | Sorghum | extracellular | 49.29 | 52.26 |
| KXG40417 | Sorghum | mitochondrion | 53.9 | 51.18 |
| OQU93455 | Sorghum | extracellular | 45.74 | 50.39 |
| EER95684 | Sorghum | extracellular | 45.39 | 48.12 |
| OQU93458 | Sorghum | extracellular | 45.39 | 48.12 |
| OQU93457 | Sorghum | extracellular | 45.39 | 48.12 |
| EER95683 | Sorghum | extracellular | 45.39 | 48.12 |
| OQU93459 | Sorghum | extracellular | 45.39 | 48.12 |
| EES11234 | Sorghum | extracellular | 44.68 | 47.91 |
| EES07509 | Sorghum | extracellular | 43.62 | 46.59 |
| EER88254 | Sorghum | extracellular | 41.13 | 44.79 |
| KXG19818 | Sorghum | extracellular | 41.13 | 44.79 |
| EES11235 | Sorghum | extracellular | 46.1 | 44.67 |
| GSMUA_AchrUn_... | Banana | extracellular | 14.54 | 44.57 |
| EES11233 | Sorghum | extracellular | 44.68 | 43.75 |
| EES05780 | Sorghum | extracellular | 43.26 | 41.36 |
| EES07508 | Sorghum | extracellular | 42.91 | 41.16 |
| EER93754 | Sorghum | extracellular | 43.26 | 39.87 |
| KXG37946 | Sorghum | extracellular | 44.33 | 38.46 |
| EER98447 | Sorghum | extracellular | 40.43 | 37.13 |
| EER98449 | Sorghum | extracellular | 40.78 | 36.86 |
| EES05488 | Sorghum | extracellular | 32.98 | 34.07 |
| EER95568 | Sorghum | extracellular | 23.05 | 24.07 |
| EER99370 | Sorghum | extracellular | 21.28 | 21.9 |
| KXG38992 | Sorghum | extracellular | 20.92 | 20.92 |
| OQU89980 | Sorghum | extracellular, plasma membrane, vacuole | 15.96 | 20.0 |
| KXG20919 | Sorghum | plastid | 18.79 | 11.96 |
Protein Annotations
| Gene3D:2.40.40.10 | Gene3D:2.60.40.760 | MapMan:35.1 | EntrezGene:8058097 | UniProt:C5WSG0 | EnsemblPlants:EER94506 |
| ProteinID:EER94506 | ProteinID:EER94506.1 | InterPro:Expan_Lol_pI | InterPro:Expansin/allergen_DPBB_dom | InterPro:Expansin_CBD | InterPro:Expansin_CBD_sf |
| GO:GO:0000003 | GO:GO:0005575 | GO:GO:0005576 | GO:GO:0008150 | GO:GO:0019953 | InterPro:IPR007112 |
| InterPro:IPR007117 | InterPro:IPR036749 | InterPro:IPR036908 | InterPro:LolPI | PFAM:PF01357 | PFAM:PF03330 |
| PRINTS:PR00829 | PRINTS:PR01225 | PFscan:PS50842 | PFscan:PS50843 | PANTHER:PTHR31692 | PANTHER:PTHR31692:SF17 |
| InterPro:RlpA-like_DPBB | InterPro:RlpA-like_sf | SMART:SM00837 | EnsemblPlantsGene:SORBI_3001G301600 | SUPFAM:SSF49590 | SUPFAM:SSF50685 |
| unigene:Sbi.20291 | SignalP:SignalP-noTM | TMHMM:TMhelix | UniParc:UPI0001A82F48 | RefSeq:XP_002467508.1 | SEG:seg |
Description
hypothetical protein
Coordinates
chr1:-:58350449..58351958
Molecular Weight (calculated)
30855.3 Da
IEP (calculated)
7.133
GRAVY (calculated)
-0.294
Length
282 amino acids
Sequence
(BLAST)
(BLAST)
001: MATALSFKAA FAVAALLSVV AVTYGAPAQQ QPDLHNATDS QSQDRSLLSY SSGWLPAKAT WYGAPTGAGP DDNGGACGFK GTNQYPFSSM TSCGNEPIFK
101: DGKGCGSCYQ IRCLKSNHPA CSGVPQTVII TDMNYYPVAK YHFDLSGTAF GAMASWGLND KLRHAGIIDM QFRRVPCNFP GLTITFRVQH GSNPMYLAVL
201: IEHENQDGDV VQADIMQNNS GYWEPMHESW GSIWRIDPNR PLRGPFSIRI TNESGKQLVA KNIIPANYVA DVDYRSYVQY TN
101: DGKGCGSCYQ IRCLKSNHPA CSGVPQTVII TDMNYYPVAK YHFDLSGTAF GAMASWGLND KLRHAGIIDM QFRRVPCNFP GLTITFRVQH GSNPMYLAVL
201: IEHENQDGDV VQADIMQNNS GYWEPMHESW GSIWRIDPNR PLRGPFSIRI TNESGKQLVA KNIIPANYVA DVDYRSYVQY TN
001: MTILVVDRYY MLMNLLFALT CLLLNLTHCF SPKKFNISAA TTSDSDWSIA GSTWYGNPTG YGSDGGACGY GNAVAQPPFS KMVSAGGPSL FKSGKGCGAC
101: YQVKCTSKSA CSKNPVTVVI TDECPGCVKE SVHFDLSGTA FGAMAISGQD SQLRNVGELQ ILYKKVECNY IGKTVTFQVD KGSNANSFAV LVAYVNGDGE
201: IGRIELKQAL DSDKWLSMSQ SWGAVWKLDV SSPLRAPLSL RVTSLESGKT VVASNVIPAN WQPGAIYKSN VNF
101: YQVKCTSKSA CSKNPVTVVI TDECPGCVKE SVHFDLSGTA FGAMAISGQD SQLRNVGELQ ILYKKVECNY IGKTVTFQVD KGSNANSFAV LVAYVNGDGE
201: IGRIELKQAL DSDKWLSMSQ SWGAVWKLDV SSPLRAPLSL RVTSLESGKT VVASNVIPAN WQPGAIYKSN VNF
Arabidopsis Description
EXPB2Putative expansin-B2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SHY6]
SUBAcon: [extracellular]
SUBAcon: [extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.