Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- extracellular 8
- endoplasmic reticulum 5
- vacuole 5
- plasma membrane 5
- golgi 6
- plastid 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d047094_P001 | Maize | extracellular | 87.05 | 86.74 |
| EER91947 | Sorghum | extracellular | 56.47 | 58.36 |
| EER94506 | Sorghum | extracellular | 55.04 | 54.26 |
| EER91949 | Sorghum | extracellular | 55.04 | 54.26 |
| EER91942 | Sorghum | extracellular | 51.8 | 54.14 |
| TraesCS1D01G215300.1 | Wheat | extracellular | 53.24 | 54.01 |
| TraesCS1A01G212300.1 | Wheat | extracellular | 53.24 | 54.01 |
| EER91945 | Sorghum | extracellular | 53.6 | 53.99 |
| TraesCS1B01G225900.1 | Wheat | extracellular, mitochondrion, plastid | 52.16 | 48.66 |
| OQU92157 | Sorghum | extracellular | 52.52 | 47.4 |
| OQU93456 | Sorghum | cytosol, extracellular | 35.97 | 47.17 |
| KXG40417 | Sorghum | mitochondrion | 49.64 | 46.46 |
| EER94500 | Sorghum | extracellular | 48.2 | 46.21 |
| KXG40416 | Sorghum | extracellular, vacuole | 52.52 | 45.62 |
| OQU92156 | Sorghum | plastid | 53.24 | 45.54 |
| EER94537 | Sorghum | extracellular | 43.17 | 45.11 |
| KXG38972 | Sorghum | extracellular | 43.17 | 45.11 |
| KXG38933 | Sorghum | mitochondrion | 51.44 | 44.83 |
| KXG38969 | Sorghum | extracellular | 42.45 | 44.36 |
| EER88254 | Sorghum | extracellular | 40.65 | 43.63 |
| OQU93455 | Sorghum | extracellular | 39.93 | 43.36 |
| KXG19818 | Sorghum | extracellular | 40.29 | 43.24 |
| EES11234 | Sorghum | extracellular | 40.29 | 42.59 |
| EER95684 | Sorghum | extracellular | 40.65 | 42.48 |
| OQU93459 | Sorghum | extracellular | 40.65 | 42.48 |
| EES05315 | Sorghum | extracellular | 48.56 | 42.45 |
| EES07509 | Sorghum | extracellular | 40.29 | 42.42 |
| EER95683 | Sorghum | extracellular | 39.93 | 41.73 |
| OQU93458 | Sorghum | extracellular | 39.93 | 41.73 |
| OQU93457 | Sorghum | extracellular | 39.93 | 41.73 |
| EES11235 | Sorghum | extracellular | 41.73 | 39.86 |
| EES07508 | Sorghum | extracellular | 41.37 | 39.12 |
| EES05780 | Sorghum | extracellular | 41.01 | 38.64 |
| EES11233 | Sorghum | extracellular | 38.13 | 36.81 |
| EER98449 | Sorghum | extracellular | 40.29 | 35.9 |
| EER98447 | Sorghum | extracellular | 39.57 | 35.83 |
| EES05488 | Sorghum | extracellular | 33.09 | 33.7 |
| GSMUA_AchrUn_... | Banana | extracellular | 11.15 | 33.7 |
| EER93754 | Sorghum | extracellular | 37.05 | 33.66 |
| KXG37946 | Sorghum | extracellular | 36.69 | 31.38 |
| EER99370 | Sorghum | extracellular | 25.54 | 25.91 |
| EER95568 | Sorghum | extracellular | 24.1 | 24.81 |
| OQU89980 | Sorghum | extracellular, plasma membrane, vacuole | 18.35 | 22.67 |
| KXG38992 | Sorghum | extracellular | 22.3 | 21.99 |
| KXG20919 | Sorghum | plastid | 22.66 | 14.22 |
Protein Annotations
| Gene3D:2.40.40.10 | Gene3D:2.60.40.760 | MapMan:35.1 | EntrezGene:8055664 | UniProt:C5WSF8 | EnsemblPlants:EER91948 |
| ProteinID:EER91948 | ProteinID:EER91948.1 | InterPro:Expan_Lol_pI | InterPro:Expansin/allergen_DPBB_dom | InterPro:Expansin_CBD | InterPro:Expansin_CBD_sf |
| GO:GO:0000003 | GO:GO:0005575 | GO:GO:0005576 | GO:GO:0008150 | GO:GO:0019953 | InterPro:IPR007112 |
| InterPro:IPR007117 | InterPro:IPR036749 | InterPro:IPR036908 | InterPro:LolPI | PFAM:PF01357 | PFAM:PF03330 |
| PRINTS:PR00829 | PRINTS:PR01225 | PFscan:PS50842 | PFscan:PS50843 | PANTHER:PTHR31692 | PANTHER:PTHR31692:SF12 |
| InterPro:RlpA-like_DPBB | InterPro:RlpA-like_sf | EnsemblPlantsGene:SORBI_3001G301400 | SUPFAM:SSF49590 | SUPFAM:SSF50685 | SignalP:SignalP-noTM |
| UniParc:UPI0001A824C2 | RefSeq:XP_002464950.1 | SEG:seg | : | : | : |
Description
hypothetical protein
Coordinates
chr1:+:58302321..58303918
Molecular Weight (calculated)
29998.5 Da
IEP (calculated)
9.729
GRAVY (calculated)
-0.242
Length
278 amino acids
Sequence
(BLAST)
(BLAST)
001: MAVAISIKVA ALVISVFATH GARAQPSYNN ASSSSARREL YYSSTTGGSW LPAKATWYGR PNGAGPDNNG GGCGYSGTNL YPFNSMTSCG DRNVFRDGKG
101: CGSCYQIKCV SSNNPACSGV PQTIIITDVN YDTSLGPNRF DLSGTAFGAM AKPGLNGKLR NAGALSIQYR RVPCNYKGLN VRFHVMGGCN PFYFAVIVYY
201: AGSDGAVVQV ELKEANSRTW RPLYESWGAV WRIDPGHPLR APLSLRVRSD GGKTLVAYDV IPINWRGNAD YRTIAQFR
101: CGSCYQIKCV SSNNPACSGV PQTIIITDVN YDTSLGPNRF DLSGTAFGAM AKPGLNGKLR NAGALSIQYR RVPCNYKGLN VRFHVMGGCN PFYFAVIVYY
201: AGSDGAVVQV ELKEANSRTW RPLYESWGAV WRIDPGHPLR APLSLRVRSD GGKTLVAYDV IPINWRGNAD YRTIAQFR
001: MTILVVDRYY MLMNLLFALT CLLLNLTHCF SPKKFNISAA TTSDSDWSIA GSTWYGNPTG YGSDGGACGY GNAVAQPPFS KMVSAGGPSL FKSGKGCGAC
101: YQVKCTSKSA CSKNPVTVVI TDECPGCVKE SVHFDLSGTA FGAMAISGQD SQLRNVGELQ ILYKKVECNY IGKTVTFQVD KGSNANSFAV LVAYVNGDGE
201: IGRIELKQAL DSDKWLSMSQ SWGAVWKLDV SSPLRAPLSL RVTSLESGKT VVASNVIPAN WQPGAIYKSN VNF
101: YQVKCTSKSA CSKNPVTVVI TDECPGCVKE SVHFDLSGTA FGAMAISGQD SQLRNVGELQ ILYKKVECNY IGKTVTFQVD KGSNANSFAV LVAYVNGDGE
201: IGRIELKQAL DSDKWLSMSQ SWGAVWKLDV SSPLRAPLSL RVTSLESGKT VVASNVIPAN WQPGAIYKSN VNF
Arabidopsis Description
EXPB2Putative expansin-B2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SHY6]
SUBAcon: [extracellular]
SUBAcon: [extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.