CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 8
endoplasmic reticulum 5
vacuole 5
plasma membrane 5
golgi 6
plastid 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	plastid, secretory
BaCelLo:	secretory
ChloroP:	plastid
EpiLoc:	golgi
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d019560_P001	Maize	plasma membrane	91.03	92.21
EER98447	Sorghum	extracellular	82.05	83.39
TraesCS6A01G249300.1	Wheat	extracellular	69.23	74.74
TraesCS6D01G231300.1	Wheat	extracellular	68.91	74.39
TraesCS6B01G275700.1	Wheat	extracellular	67.63	73.01
HORVU0Hr1G018320.1	Barley	extracellular	66.99	72.32
TraesCS3D01G482800.1	Wheat	extracellular	66.67	72.22
TraesCS3B01G535800.1	Wheat	extracellular	66.03	71.28
EES07508	Sorghum	extracellular	66.67	70.75
TraesCS6A01G249200.1	Wheat	extracellular	65.06	70.73
EES05780	Sorghum	extracellular	66.67	70.51
TraesCS3A01G488000.1	Wheat	extracellular	65.06	70.24
TraesCS6B01G275800.1	Wheat	extracellular	64.42	70.03
TraesCS6D01G231200.1	Wheat	extracellular	64.42	70.03
HORVU6Hr1G063180.1	Barley	extracellular	63.14	68.64
HORVU0Hr1G016410.1	Barley	extracellular	63.14	68.64
EES11234	Sorghum	extracellular	46.47	55.13
EES07509	Sorghum	extracellular	45.19	53.41
EES11235	Sorghum	extracellular	49.36	52.92
EER88254	Sorghum	extracellular	42.95	51.74
KXG19818	Sorghum	extracellular	42.95	51.74
EES11233	Sorghum	extracellular	47.76	51.74
EER91942	Sorghum	extracellular	41.03	48.12
EER93754	Sorghum	extracellular	45.83	46.73
EER91947	Sorghum	extracellular	38.78	44.98
EER91945	Sorghum	extracellular	38.78	43.84
OQU92157	Sorghum	extracellular	41.67	42.21
KXG37946	Sorghum	extracellular	43.91	42.15
KXG40417	Sorghum	mitochondrion	39.42	41.41
KXG38972	Sorghum	extracellular	35.26	41.35
EER94537	Sorghum	extracellular	35.26	41.35
EER94500	Sorghum	extracellular	38.14	41.03
KXG38969	Sorghum	extracellular	34.94	40.98
EER91949	Sorghum	extracellular	36.86	40.78
EER94506	Sorghum	extracellular	36.86	40.78
KXG38933	Sorghum	mitochondrion	41.35	40.44
EER91948	Sorghum	extracellular	35.9	40.29
OQU92156	Sorghum	plastid	41.67	40.0
OQU93455	Sorghum	extracellular	32.37	39.45
OQU93456	Sorghum	cytosol, extracellular	26.6	39.15
OQU93457	Sorghum	extracellular	33.33	39.1
OQU93458	Sorghum	extracellular	33.33	39.1
EER95683	Sorghum	extracellular	33.33	39.1
EES05488	Sorghum	extracellular	33.97	38.83
KXG40416	Sorghum	extracellular, vacuole	39.74	38.75
OQU93459	Sorghum	extracellular	33.01	38.72
EER95684	Sorghum	extracellular	33.01	38.72
EES05315	Sorghum	extracellular	39.42	38.68
EER95568	Sorghum	extracellular	23.08	26.67
EER99370	Sorghum	extracellular	23.08	26.28
KXG38992	Sorghum	extracellular	23.08	25.53
OQU89980	Sorghum	extracellular, plasma membrane, vacuole	14.42	20.0
KXG20919	Sorghum	plastid	19.55	13.77

Protein Annotations

Gene3D:2.40.40.10	Gene3D:2.60.40.760	MapMan:35.1	EntrezGene:8057965	UniProt:C5X543	EnsemblPlants:EER98449
ProteinID:EER98449	ProteinID:EER98449.1	InterPro:Expan_Lol_pI	InterPro:Expansin/allergen_DPBB_dom	InterPro:Expansin_CBD	InterPro:Expansin_CBD_sf
GO:GO:0000003	GO:GO:0005575	GO:GO:0005576	GO:GO:0008150	GO:GO:0019953	InterPro:IPR007112
InterPro:IPR007117	InterPro:IPR036749	InterPro:IPR036908	InterPro:LolPI	PFAM:PF01357	PFAM:PF03330
PRINTS:PR00829	PRINTS:PR01225	PFscan:PS50842	PFscan:PS50843	PANTHER:PTHR31692	PANTHER:PTHR31692:SF8
InterPro:RlpA-like_DPBB	InterPro:RlpA-like_sf	SMART:SM00837	EnsemblPlantsGene:SORBI_3002G124500	SUPFAM:SSF49590	SUPFAM:SSF50685
unigene:Sbi.8510	SignalP:SignalP-noTM	TMHMM:TMhelix	UniParc:UPI0001A840F0	RefSeq:XP_002461928.1	SEG:seg

Description

hypothetical protein

Coordinates

chr2:-:16648054..16649441

Molecular Weight (calculated)

33032.8 Da

IEP (calculated)

9.926

GRAVY (calculated)

-0.190

Length

312 amino acids

Sequence
(BLAST)

001: MAKLCTLLLA AVVVLSLLVS PIACNRKFSK PKPKPASHRR PVTAVKPKPK PVSYKPAPVA AKPPRSNHTA TPRPSPIVYG SGGWLSGAGA TYYGATNGDG
101: SDGGACGYQT AVGKKPFDSM IAAGSTPLYK GGEGCGACYE VKCKTNAACS GQPVTIVITD QSPGDLFPGE VEHFDMSGTA MGAMARPGMA DKLRAGGVLR
201: ILYRRVPCKY PGVNVAFKVD QGANPFYFDV LIEFEDDDGD LKAVDLMEAG SSVWTPMAHN WGATWRLNNG RRLRAPFGLR LTSDSGRVLV ANNAIPAAWK
301: PGKAYRSLVN YP

Best Arabidopsis Sequence Match ( AT1G65680.1 )
(BLAST)

001: MTILVVDRYY MLMNLLFALT CLLLNLTHCF SPKKFNISAA TTSDSDWSIA GSTWYGNPTG YGSDGGACGY GNAVAQPPFS KMVSAGGPSL FKSGKGCGAC
101: YQVKCTSKSA CSKNPVTVVI TDECPGCVKE SVHFDLSGTA FGAMAISGQD SQLRNVGELQ ILYKKVECNY IGKTVTFQVD KGSNANSFAV LVAYVNGDGE
201: IGRIELKQAL DSDKWLSMSQ SWGAVWKLDV SSPLRAPLSL RVTSLESGKT VVASNVIPAN WQPGAIYKSN VNF

Arabidopsis Description

EXPB2Putative expansin-B2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SHY6]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.