Skip to main content
crop-pal logo
Sorghum
Search for another protein from :
Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular

Predictor Summary:
  • extracellular 8
  • endoplasmic reticulum 5
  • vacuole 5
  • plasma membrane 5
  • golgi 6
  • plastid 2
Predictors GFP MS/MS Papers
Winner Takes All:extracellular
Any Predictor:plastid, secretory
BaCelLo:secretory
ChloroP:plastid
EpiLoc:golgi
iPSORT:secretory
MultiLoc:extracellular
Plant-mPloc:extracellular
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plastid
YLoc:extracellular
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d017495_P001 Maize extracellular 94.24 94.56
EES07508 Sorghum extracellular 93.56 93.88
Os02t0658800-01 Rice extracellular 83.05 83.9
EER98449 Sorghum extracellular 70.51 66.67
EER98447 Sorghum extracellular 69.15 66.45
EES11235 Sorghum extracellular 61.02 61.86
EES07509 Sorghum extracellular 55.25 61.74
EES11234 Sorghum extracellular 54.24 60.84
EES11233 Sorghum extracellular 59.32 60.76
KXG19818 Sorghum extracellular 50.17 57.14
EER88254 Sorghum extracellular 50.17 57.14
EER91942 Sorghum extracellular 46.78 51.88
EER93754 Sorghum extracellular 50.85 49.02
EER91947 Sorghum extracellular 41.69 45.72
OQU92157 Sorghum extracellular 47.46 45.45
EER94537 Sorghum extracellular 40.68 45.11
KXG38972 Sorghum extracellular 40.68 45.11
KXG38969 Sorghum extracellular 40.68 45.11
KXG37946 Sorghum extracellular 48.81 44.31
EER91945 Sorghum extracellular 41.36 44.2
OQU93456 Sorghum cytosol, extracellular 31.19 43.4
EER94506 Sorghum extracellular 41.36 43.26
EER91949 Sorghum extracellular 41.36 43.26
EER94500 Sorghum extracellular 42.37 43.1
KXG40417 Sorghum mitochondrion 43.39 43.1
OQU92156 Sorghum plastid 47.46 43.08
OQU93455 Sorghum extracellular 37.29 42.97
KXG38933 Sorghum mitochondrion 46.44 42.95
KXG40416 Sorghum extracellular, vacuole 46.1 42.5
OQU93459 Sorghum extracellular 38.31 42.48
EER95683 Sorghum extracellular 37.97 42.11
EER95684 Sorghum extracellular 37.97 42.11
OQU93457 Sorghum extracellular 37.97 42.11
OQU93458 Sorghum extracellular 37.97 42.11
EES05315 Sorghum extracellular 44.75 41.51
EES05488 Sorghum extracellular 38.31 41.39
EER91948 Sorghum extracellular 38.64 41.01
EER95568 Sorghum extracellular 27.8 30.37
EER99370 Sorghum extracellular 27.12 29.2
KXG38992 Sorghum extracellular 26.44 27.66
OQU89980 Sorghum extracellular, plasma membrane, vacuole 16.27 21.33
KXG20919 Sorghum plastid 21.02 14.0
Protein Annotations
Gene3D:2.40.40.10Gene3D:2.60.40.760MapMan:35.1EntrezGene:8073951UniProt:C5XRX1EnsemblPlants:EES05780
ProteinID:EES05780ProteinID:EES05780.1InterPro:Expan_Lol_pIInterPro:Expansin/allergen_DPBB_domInterPro:Expansin_CBDInterPro:Expansin_CBD_sf
GO:GO:0000003GO:GO:0005575GO:GO:0005576GO:GO:0008150GO:GO:0019953InterPro:IPR007112
InterPro:IPR007117InterPro:IPR036749InterPro:IPR036908InterPro:LolPIPFAM:PF01357PFAM:PF03330
PRINTS:PR00829PRINTS:PR01225PFscan:PS50842PFscan:PS50843PANTHER:PTHR31692PANTHER:PTHR31692:SF50
InterPro:RlpA-like_DPBBInterPro:RlpA-like_sfSMART:SM00837EnsemblPlantsGene:SORBI_3004G294300SUPFAM:SSF49590SUPFAM:SSF50685
unigene:Sbi.20760SignalP:SignalP-noTMTMHMM:TMhelixUniParc:UPI0001A85F68RefSeq:XP_002452804.1SEG:seg
Description
hypothetical protein
Coordinates
chr4:+:63429826..63431751
Molecular Weight (calculated)
30772.6 Da
IEP (calculated)
8.660
GRAVY (calculated)
-0.069
Length
295 amino acids
Sequence
(BLAST)
001: MAKSYTFLFG ALVVLALLVS PIACSRKLAK PNKHKPTHKP AARVVAPRSN YTSTPSASDA YGSGGWLSAG ATYYGAPNGD GSDGGACGYQ TAVGQRPFSS
101: MIAAGSPSLF KGGKGCGACY EVKCDSNAAC SGQPATVVIT DECPGGVCLA EAAHFDMSGT SMGAMAKPGM ADRLRAAGIL KIQYKRVPCK YSGVNIAFRV
201: DQGSNPFYLE VLVEFEDGDG DLSAVDLMEA GCGTWTPMVQ NWGALWRYNS NTGKALKAPF SLRLTSDSGK VLVANNVIPA GWNPGATYRS LVNYS
Best Arabidopsis Sequence Match ( AT2G45110.1 )
(BLAST)
001: MASSQRYFAL LALFAVSLKF CYCQNETIDV AGSGTAGVTW YGEPFGAGST GGACGYGSAV ANPPLYAMVS AGGPSLFNNG KGCGTCYQVV CIGHPACSGS
101: PITVTITDEC PGGPCASEPV HIDLSGKAMG ALAKPGQADQ LRSAGVIRVN YKRAACLYRG TNIVFRMDAG ANPYYISFVV EYENGDGDLS NVEIQPAGGS
201: FISMQEMRSA VWKVNSGSAL RGPFNIRLTS GESHKVIVAY NVIPANWKPD ESYRSIVNF
Arabidopsis Description
EXPB4Expansin-B4 [Source:UniProtKB/Swiss-Prot;Acc:Q9SHD1]
SUBAcon: [extracellular]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.