Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- extracellular 10
- endoplasmic reticulum 5
- vacuole 5
- plasma membrane 5
- golgi 5
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| OQU93459 | Sorghum | extracellular | 98.5 | 98.5 |
| OQU93457 | Sorghum | extracellular | 98.12 | 98.12 |
| OQU93458 | Sorghum | extracellular | 97.74 | 97.74 |
| EER95683 | Sorghum | extracellular | 97.74 | 97.74 |
| OQU93455 | Sorghum | extracellular | 93.23 | 96.88 |
| OQU93456 | Sorghum | cytosol, extracellular | 76.69 | 96.23 |
| Zm00001d048384_P001 | Maize | extracellular | 86.09 | 85.13 |
| Zm00001d017736_P001 | Maize | cytosol | 61.65 | 84.97 |
| Zm00001d017740_P001 | Maize | extracellular | 80.08 | 84.19 |
| Zm00001d017735_P001 | Maize | extracellular | 79.7 | 83.79 |
| Zm00001d040609_P001 | Maize | extracellular | 84.59 | 83.64 |
| Zm00001d040608_P001 | Maize | extracellular | 83.83 | 83.21 |
| Zm00001d017737_P001 | Maize | extracellular | 84.21 | 82.96 |
| Zm00001d017732_P001 | Maize | extracellular | 83.08 | 81.85 |
| Zm00001d017733_P001 | Maize | extracellular | 83.08 | 81.85 |
| Zm00001d017731_P001 | Maize | extracellular | 66.92 | 76.39 |
| Os03t0106900-00 | Rice | extracellular | 65.04 | 64.79 |
| Os03t0106500-01 | Rice | plasma membrane | 65.04 | 64.79 |
| HORVU4Hr1G086830.1 | Barley | extracellular | 63.91 | 63.91 |
| TraesCS4B01G362100.1 | Wheat | extracellular | 64.66 | 63.7 |
| TraesCS4B01G362600.1 | Wheat | extracellular, unclear | 64.29 | 63.33 |
| TraesCS4B01G362500.1 | Wheat | extracellular | 64.29 | 63.33 |
| TraesCS4D01G355700.1 | Wheat | extracellular | 63.53 | 63.06 |
| TraesCS5A01G530700.1 | Wheat | extracellular | 63.91 | 62.96 |
| TraesCS4D01G355800.1 | Wheat | extracellular | 63.91 | 62.96 |
| TraesCS4D01G355100.1 | Wheat | extracellular | 63.91 | 62.96 |
| Os03t0106800-01 | Rice | plasma membrane | 63.16 | 62.92 |
| TraesCS5A01G530100.1 | Wheat | extracellular | 63.53 | 62.59 |
| HORVU4Hr1G086930.1 | Barley | extracellular | 63.91 | 62.04 |
| Os03t0106700-00 | Rice | extracellular | 52.26 | 60.96 |
| HORVU4Hr1G087070.2 | Barley | extracellular, mitochondrion, peroxisome | 63.91 | 60.5 |
| EER94537 | Sorghum | extracellular | 54.51 | 54.51 |
| KXG38969 | Sorghum | extracellular | 54.14 | 54.14 |
| KXG38972 | Sorghum | extracellular | 54.14 | 54.14 |
| Zm00001d017734_P001 | Maize | cytosol | 82.33 | 47.82 |
| EER91942 | Sorghum | extracellular | 47.74 | 47.74 |
| EER91945 | Sorghum | extracellular | 48.12 | 46.38 |
| EER91949 | Sorghum | extracellular | 48.12 | 45.39 |
| EER94506 | Sorghum | extracellular | 48.12 | 45.39 |
| EER91947 | Sorghum | extracellular | 45.86 | 45.35 |
| EER94500 | Sorghum | extracellular | 48.12 | 44.14 |
| OQU92157 | Sorghum | extracellular | 48.87 | 42.21 |
| EES05315 | Sorghum | extracellular | 49.62 | 41.51 |
| KXG40417 | Sorghum | mitochondrion | 46.24 | 41.41 |
| KXG40416 | Sorghum | extracellular, vacuole | 49.25 | 40.94 |
| KXG38933 | Sorghum | mitochondrion | 48.87 | 40.75 |
| EES11234 | Sorghum | extracellular | 40.23 | 40.68 |
| EER91948 | Sorghum | extracellular | 42.48 | 40.65 |
| KXG19818 | Sorghum | extracellular | 38.72 | 39.77 |
| EES11235 | Sorghum | extracellular | 43.23 | 39.52 |
| EER88254 | Sorghum | extracellular | 38.35 | 39.38 |
| OQU92156 | Sorghum | plastid | 47.74 | 39.08 |
| EES07509 | Sorghum | extracellular | 38.35 | 38.64 |
| EES07508 | Sorghum | extracellular | 42.11 | 38.1 |
| EES05780 | Sorghum | extracellular | 42.11 | 37.97 |
| EES11233 | Sorghum | extracellular | 40.6 | 37.5 |
| GSMUA_AchrUn_... | Banana | extracellular | 12.03 | 34.78 |
| EER98447 | Sorghum | extracellular | 38.35 | 33.22 |
| EER98449 | Sorghum | extracellular | 38.72 | 33.01 |
| EER93754 | Sorghum | extracellular | 37.22 | 32.35 |
| EES05488 | Sorghum | extracellular | 32.71 | 31.87 |
| KXG37946 | Sorghum | extracellular | 38.35 | 31.38 |
| EER99370 | Sorghum | extracellular | 23.68 | 22.99 |
| EER95568 | Sorghum | extracellular | 23.31 | 22.96 |
| KXG38992 | Sorghum | extracellular | 22.56 | 21.28 |
| OQU89980 | Sorghum | extracellular, plasma membrane, vacuole | 15.79 | 18.67 |
| KXG20919 | Sorghum | plastid | 21.05 | 12.64 |
Protein Annotations
| Gene3D:2.40.40.10 | Gene3D:2.60.40.760 | MapMan:35.1 | EntrezGene:8081543 | UniProt:C5WMS5 | EnsemblPlants:EER95684 |
| ProteinID:EER95684 | ProteinID:EER95684.1 | InterPro:Expan_Lol_pI | InterPro:Expansin/allergen_DPBB_dom | InterPro:Expansin_CBD | InterPro:Expansin_CBD_sf |
| GO:GO:0000003 | GO:GO:0005575 | GO:GO:0005576 | GO:GO:0008150 | GO:GO:0019953 | InterPro:IPR007112 |
| InterPro:IPR007117 | InterPro:IPR036749 | InterPro:IPR036908 | InterPro:LolPI | PFAM:PF01357 | PFAM:PF03330 |
| PRINTS:PR00829 | PRINTS:PR01225 | PFscan:PS50842 | PFscan:PS50843 | PANTHER:PTHR31692 | PANTHER:PTHR31692:SF21 |
| InterPro:RlpA-like_DPBB | InterPro:RlpA-like_sf | SMART:SM00837 | EnsemblPlantsGene:SORBI_3001G539940 | SUPFAM:SSF49590 | SUPFAM:SSF50685 |
| unigene:Sbi.20971 | SignalP:SignalP-noTM | TMHMM:TMhelix | UniParc:UPI0001A8332C | RefSeq:XP_002468686.1 | SEG:seg |
Description
hypothetical protein
Coordinates
chr1:-:80277240..80278527
Molecular Weight (calculated)
28621.1 Da
IEP (calculated)
7.306
GRAVY (calculated)
-0.270
Length
266 amino acids
Sequence
(BLAST)
(BLAST)
001: MGVNMMSWSM QVAVVVALAF LVGGAWCGPP KVAPGKNITA TYGSDWLEAK ATWYGKPTGA GPDDNGGACG YKDVNKAPFN SMGACGNLPI FKDGLGCGSC
101: FEIKCNKPAE CSGEAVVVHI TDMNYEQIAA YHFDLAGTAF GAMAKKGEEE KLRKAGIIDM QFRRVKCKYG EKVTFHVEKG SNPNYLALLV KYVDGDGDVV
201: GVDIKEKGGD AYQSLKHSWG AVWRKDSDKP IKFPVTVQIT TEGGTKTAYE DVIPEGWKAD TTYTAK
101: FEIKCNKPAE CSGEAVVVHI TDMNYEQIAA YHFDLAGTAF GAMAKKGEEE KLRKAGIIDM QFRRVKCKYG EKVTFHVEKG SNPNYLALLV KYVDGDGDVV
201: GVDIKEKGGD AYQSLKHSWG AVWRKDSDKP IKFPVTVQIT TEGGTKTAYE DVIPEGWKAD TTYTAK
001: MTILVVDRYY MLMNLLFALT CLLLNLTHCF SPKKFNISAA TTSDSDWSIA GSTWYGNPTG YGSDGGACGY GNAVAQPPFS KMVSAGGPSL FKSGKGCGAC
101: YQVKCTSKSA CSKNPVTVVI TDECPGCVKE SVHFDLSGTA FGAMAISGQD SQLRNVGELQ ILYKKVECNY IGKTVTFQVD KGSNANSFAV LVAYVNGDGE
201: IGRIELKQAL DSDKWLSMSQ SWGAVWKLDV SSPLRAPLSL RVTSLESGKT VVASNVIPAN WQPGAIYKSN VNF
101: YQVKCTSKSA CSKNPVTVVI TDECPGCVKE SVHFDLSGTA FGAMAISGQD SQLRNVGELQ ILYKKVECNY IGKTVTFQVD KGSNANSFAV LVAYVNGDGE
201: IGRIELKQAL DSDKWLSMSQ SWGAVWKLDV SSPLRAPLSL RVTSLESGKT VVASNVIPAN WQPGAIYKSN VNF
Arabidopsis Description
EXPB2Putative expansin-B2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SHY6]
SUBAcon: [extracellular]
SUBAcon: [extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.