Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- extracellular 4
- endoplasmic reticulum 2
- vacuole 2
- plasma membrane 2
- golgi 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU4Hr1G087070.2 | Barley | extracellular, mitochondrion, peroxisome | 99.27 | 96.8 |
| HORVU4Hr1G086830.1 | Barley | extracellular | 93.8 | 96.62 |
| TraesCS5A01G530700.1 | Wheat | extracellular | 84.67 | 85.93 |
| TraesCS5A01G530100.1 | Wheat | extracellular | 84.31 | 85.56 |
| TraesCS4B01G362100.1 | Wheat | extracellular | 83.94 | 85.19 |
| TraesCS4D01G355800.1 | Wheat | extracellular | 83.58 | 84.81 |
| TraesCS4B01G362500.1 | Wheat | extracellular | 83.58 | 84.81 |
| TraesCS4B01G362600.1 | Wheat | extracellular, unclear | 83.58 | 84.81 |
| TraesCS4D01G355100.1 | Wheat | extracellular | 83.58 | 84.81 |
| TraesCS4D01G355700.1 | Wheat | extracellular | 82.48 | 84.33 |
| OQU93456 | Sorghum | cytosol, extracellular | 51.82 | 66.98 |
| Zm00001d017736_P001 | Maize | cytosol | 46.72 | 66.32 |
| Zm00001d017735_P001 | Maize | extracellular | 59.85 | 64.82 |
| Zm00001d017740_P001 | Maize | extracellular | 59.49 | 64.43 |
| EER95684 | Sorghum | extracellular | 62.04 | 63.91 |
| Zm00001d048384_P001 | Maize | extracellular | 62.41 | 63.57 |
| Zm00001d040609_P001 | Maize | extracellular | 62.41 | 63.57 |
| OQU93457 | Sorghum | extracellular | 61.68 | 63.53 |
| EER95683 | Sorghum | extracellular | 61.68 | 63.53 |
| OQU93459 | Sorghum | extracellular | 61.68 | 63.53 |
| OQU93458 | Sorghum | extracellular | 61.68 | 63.53 |
| Zm00001d040608_P001 | Maize | extracellular | 61.68 | 63.06 |
| Os03t0106500-01 | Rice | plasma membrane | 61.31 | 62.92 |
| Os03t0106900-00 | Rice | extracellular | 61.31 | 62.92 |
| OQU93455 | Sorghum | extracellular | 58.76 | 62.89 |
| Zm00001d017737_P001 | Maize | extracellular | 60.22 | 61.11 |
| Os03t0106800-01 | Rice | plasma membrane | 59.49 | 61.05 |
| Os03t0106700-00 | Rice | extracellular | 50.37 | 60.53 |
| Zm00001d017733_P001 | Maize | extracellular | 59.12 | 60.0 |
| Zm00001d017732_P001 | Maize | extracellular | 59.12 | 60.0 |
| Zm00001d017731_P001 | Maize | extracellular | 49.27 | 57.94 |
| HORVU1Hr1G053300.1 | Barley | extracellular | 55.84 | 55.23 |
| HORVU3Hr1G076110.1 | Barley | cytosol, extracellular | 24.09 | 47.83 |
| HORVU3Hr1G073140.1 | Barley | plastid | 45.62 | 47.53 |
| HORVU3Hr1G105170.1 | Barley | plastid | 45.62 | 47.53 |
| HORVU6Hr1G055090.1 | Barley | extracellular | 45.26 | 46.27 |
| HORVU0Hr1G005490.1 | Barley | extracellular | 48.18 | 46.15 |
| HORVU3Hr1G001920.2 | Barley | extracellular | 46.35 | 45.2 |
| HORVU2Hr1G013380.1 | Barley | cytosol, extracellular, mitochondrion | 37.23 | 43.04 |
| HORVU6Hr1G005760.1 | Barley | extracellular | 44.53 | 42.81 |
| HORVU1Hr1G054210.1 | Barley | extracellular | 41.97 | 42.44 |
| HORVU3Hr1G073120.1 | Barley | extracellular | 47.08 | 42.16 |
| HORVU3Hr1G105180.1 | Barley | extracellular | 47.08 | 42.16 |
| HORVU6Hr1G005810.3 | Barley | extracellular | 46.35 | 41.91 |
| HORVU2Hr1G013360.1 | Barley | extracellular | 37.96 | 41.43 |
| HORVU0Hr1G016380.2 | Barley | extracellular | 39.05 | 40.38 |
| GSMUA_AchrUn_... | Banana | extracellular | 13.14 | 39.13 |
| HORVU2Hr1G097480.1 | Barley | extracellular | 39.78 | 38.52 |
| HORVU1Hr1G054240.2 | Barley | plastid | 44.53 | 38.49 |
| HORVU3Hr1G105520.1 | Barley | extracellular | 47.45 | 37.68 |
| HORVU6Hr1G063180.1 | Barley | extracellular | 37.96 | 36.24 |
| HORVU0Hr1G016410.1 | Barley | extracellular | 37.96 | 36.24 |
| Zm00001d017734_P001 | Maize | cytosol | 59.49 | 35.59 |
| HORVU0Hr1G018320.1 | Barley | extracellular | 37.23 | 35.29 |
| HORVU2Hr1G097510.1 | Barley | extracellular, mitochondrion, plastid | 35.77 | 35.25 |
| HORVU6Hr1G060410.7 | Barley | extracellular | 33.94 | 34.7 |
| HORVU5Hr1G019100.1 | Barley | extracellular, plasma membrane | 44.53 | 34.56 |
| HORVU2Hr1G097490.1 | Barley | plastid | 38.32 | 33.76 |
| HORVU2Hr1G013340.1 | Barley | extracellular | 35.77 | 33.56 |
| HORVU4Hr1G088080.4 | Barley | plastid | 45.62 | 31.02 |
| HORVU4Hr1G088140.3 | Barley | extracellular | 34.31 | 29.19 |
| HORVU5Hr1G092910.9 | Barley | plastid | 37.59 | 24.88 |
| HORVU4Hr1G081990.2 | Barley | extracellular | 23.72 | 23.21 |
| HORVU4Hr1G081800.6 | Barley | extracellular, golgi, plastid | 23.72 | 21.74 |
| HORVU1Hr1G052290.4 | Barley | extracellular | 21.17 | 20.94 |
| HORVU7Hr1G119340.3 | Barley | extracellular, golgi, plastid | 21.17 | 18.77 |
| HORVU7Hr1G119200.1 | Barley | golgi, plastid, vacuole | 20.8 | 18.04 |
| HORVU7Hr1G119220.1 | Barley | extracellular, golgi, plastid | 19.34 | 16.93 |
Protein Annotations
| Gene3D:2.40.40.10 | Gene3D:2.60.40.760 | MapMan:35.1 | UniProt:A0A287PZY5 | InterPro:Expan_Lol_pI | InterPro:Expansin/allergen_DPBB_dom |
| InterPro:Expansin_CBD | InterPro:Expansin_CBD_sf | GO:GO:0000003 | GO:GO:0005575 | GO:GO:0005576 | GO:GO:0008150 |
| GO:GO:0019953 | EnsemblPlantsGene:HORVU4Hr1G086930 | EnsemblPlants:HORVU4Hr1G086930.1 | InterPro:IPR007112 | InterPro:IPR007117 | InterPro:IPR036749 |
| InterPro:IPR036908 | InterPro:LolPI | PFAM:PF01357 | PFAM:PF03330 | PRINTS:PR00829 | PRINTS:PR01225 |
| PFscan:PS50842 | PFscan:PS50843 | PANTHER:PTHR31692 | PANTHER:PTHR31692:SF21 | InterPro:RlpA-like_DPBB | InterPro:RlpA-like_sf |
| SMART:SM00837 | SUPFAM:SSF49590 | SUPFAM:SSF50685 | SignalP:SignalP-noTM | TMHMM:TMhelix | UniParc:UPI000B474464 |
| SEG:seg | : | : | : | : | : |
Description
No Description!
Coordinates
chrchr4H:-:635613195..635614402
Molecular Weight (calculated)
29745.5 Da
IEP (calculated)
8.130
GRAVY (calculated)
-0.399
Length
274 amino acids
Sequence
(BLAST)
(BLAST)
001: QQRNQDLANQ LKMASSSALL VAVVLAVVVC GAHGIAKVPC GPNITATYVS EWKDAKTTWY GKPTGAGPKD NGGACGYKEV DKAPFFGMTS CGNVPIFKDG
101: RGCGSCFELK CTKPEACSGE PTIVTITDKN EEPIAAYHFD LSGHAFGTMA KKGQEQKLRD AGEVEIKFRR VKCKYPEGTK VNFHVEKGSS PNYLALVIKF
201: LQGDGDVVAV DIKPKGKDKW IELKESWGAV WRIDTPDKLI GPFSVRYTTE GGTKTVAEDV IPEGWKPDTS YETK
101: RGCGSCFELK CTKPEACSGE PTIVTITDKN EEPIAAYHFD LSGHAFGTMA KKGQEQKLRD AGEVEIKFRR VKCKYPEGTK VNFHVEKGSS PNYLALVIKF
201: LQGDGDVVAV DIKPKGKDKW IELKESWGAV WRIDTPDKLI GPFSVRYTTE GGTKTVAEDV IPEGWKPDTS YETK
001: MTILVVDRYY MLMNLLFALT CLLLNLTHCF SPKKFNISAA TTSDSDWSIA GSTWYGNPTG YGSDGGACGY GNAVAQPPFS KMVSAGGPSL FKSGKGCGAC
101: YQVKCTSKSA CSKNPVTVVI TDECPGCVKE SVHFDLSGTA FGAMAISGQD SQLRNVGELQ ILYKKVECNY IGKTVTFQVD KGSNANSFAV LVAYVNGDGE
201: IGRIELKQAL DSDKWLSMSQ SWGAVWKLDV SSPLRAPLSL RVTSLESGKT VVASNVIPAN WQPGAIYKSN VNF
101: YQVKCTSKSA CSKNPVTVVI TDECPGCVKE SVHFDLSGTA FGAMAISGQD SQLRNVGELQ ILYKKVECNY IGKTVTFQVD KGSNANSFAV LVAYVNGDGE
201: IGRIELKQAL DSDKWLSMSQ SWGAVWKLDV SSPLRAPLSL RVTSLESGKT VVASNVIPAN WQPGAIYKSN VNF
Arabidopsis Description
EXPB2Putative expansin-B2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SHY6]
SUBAcon: [extracellular]
SUBAcon: [extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.