Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, plastid, extracellular
Predictor Summary:
Predictor Summary:
- mitochondrion 2
- extracellular 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2A01G413400.1 | Wheat | extracellular | 85.25 | 90.8 |
| TraesCS2B01G432100.1 | Wheat | extracellular | 84.89 | 90.42 |
| TraesCS2D01G411200.1 | Wheat | extracellular | 84.53 | 90.04 |
| HORVU2Hr1G013380.1 | Barley | cytosol, extracellular, mitochondrion | 50.0 | 58.65 |
| HORVU0Hr1G016380.2 | Barley | extracellular | 54.32 | 56.98 |
| Os04t0552200-00 | Rice | plasma membrane | 55.4 | 56.0 |
| HORVU2Hr1G013360.1 | Barley | extracellular | 48.92 | 54.18 |
| HORVU6Hr1G063180.1 | Barley | extracellular | 53.6 | 51.92 |
| HORVU0Hr1G016410.1 | Barley | extracellular | 53.6 | 51.92 |
| HORVU2Hr1G097480.1 | Barley | extracellular | 51.44 | 50.53 |
| HORVU0Hr1G018320.1 | Barley | extracellular | 52.52 | 50.52 |
| HORVU2Hr1G097490.1 | Barley | plastid | 54.32 | 48.55 |
| HORVU3Hr1G073140.1 | Barley | plastid | 42.81 | 45.25 |
| HORVU3Hr1G105170.1 | Barley | plastid | 42.81 | 45.25 |
| HORVU2Hr1G013340.1 | Barley | extracellular | 46.76 | 44.52 |
| HORVU3Hr1G076110.1 | Barley | cytosol, extracellular | 21.94 | 44.2 |
| HORVU3Hr1G001920.2 | Barley | extracellular | 44.24 | 43.77 |
| HORVU6Hr1G055090.1 | Barley | extracellular | 41.37 | 42.91 |
| HORVU6Hr1G005760.1 | Barley | extracellular | 43.17 | 42.11 |
| HORVU1Hr1G054210.1 | Barley | extracellular | 41.01 | 42.07 |
| HORVU1Hr1G053300.1 | Barley | extracellular | 41.73 | 41.88 |
| HORVU6Hr1G005810.3 | Barley | extracellular | 44.96 | 41.25 |
| HORVU6Hr1G060410.7 | Barley | extracellular | 39.57 | 41.04 |
| HORVU3Hr1G105180.1 | Barley | extracellular | 44.6 | 40.52 |
| HORVU3Hr1G073120.1 | Barley | extracellular | 44.6 | 40.52 |
| HORVU1Hr1G054240.2 | Barley | plastid | 44.24 | 38.8 |
| HORVU4Hr1G086830.1 | Barley | extracellular | 36.33 | 37.97 |
| HORVU0Hr1G005490.1 | Barley | extracellular | 38.49 | 37.41 |
| HORVU4Hr1G086930.1 | Barley | extracellular | 35.25 | 35.77 |
| HORVU4Hr1G087070.2 | Barley | extracellular, mitochondrion, peroxisome | 35.25 | 34.88 |
| HORVU5Hr1G019100.1 | Barley | extracellular, plasma membrane | 44.24 | 34.84 |
| HORVU3Hr1G105520.1 | Barley | extracellular | 42.81 | 34.49 |
| HORVU5Hr1G092910.9 | Barley | plastid | 50.36 | 33.82 |
| HORVU4Hr1G088080.4 | Barley | plastid | 43.88 | 30.27 |
| HORVU4Hr1G081990.2 | Barley | extracellular | 30.22 | 30.0 |
| HORVU4Hr1G081800.6 | Barley | extracellular, golgi, plastid | 28.78 | 26.76 |
| HORVU1Hr1G052290.4 | Barley | extracellular | 26.62 | 26.71 |
| HORVU4Hr1G088140.3 | Barley | extracellular | 29.5 | 25.47 |
| HORVU7Hr1G119340.3 | Barley | extracellular, golgi, plastid | 24.82 | 22.33 |
| HORVU7Hr1G119200.1 | Barley | golgi, plastid, vacuole | 24.82 | 21.84 |
| HORVU7Hr1G119220.1 | Barley | extracellular, golgi, plastid | 24.1 | 21.41 |
Protein Annotations
| Gene3D:2.40.40.10 | Gene3D:2.60.40.760 | MapMan:35.1 | UniProt:A0A287J2P1 | InterPro:Expan_Lol_pI | InterPro:Expansin/allergen_DPBB_dom |
| InterPro:Expansin_CBD | InterPro:Expansin_CBD_sf | GO:GO:0000003 | GO:GO:0005575 | GO:GO:0005576 | GO:GO:0008150 |
| GO:GO:0019953 | EnsemblPlantsGene:HORVU2Hr1G097510 | EnsemblPlants:HORVU2Hr1G097510.1 | InterPro:IPR007112 | InterPro:IPR007117 | InterPro:IPR036749 |
| InterPro:IPR036908 | InterPro:LolPI | PFAM:PF01357 | PFAM:PF03330 | PRINTS:PR00829 | PRINTS:PR01225 |
| PFscan:PS50842 | PFscan:PS50843 | PANTHER:PTHR31692 | PANTHER:PTHR31692:SF22 | InterPro:RlpA-like_DPBB | InterPro:RlpA-like_sf |
| SMART:SM00837 | SUPFAM:SSF49590 | SUPFAM:SSF50685 | UniParc:UPI000B46BF43 | SEG:seg | : |
Description
No Description!
Coordinates
chrchr2H:+:679425383..679426777
Molecular Weight (calculated)
29511.0 Da
IEP (calculated)
8.671
GRAVY (calculated)
-0.292
Length
278 amino acids
Sequence
(BLAST)
(BLAST)
001: YRPSNSTFSS FRQPGETMAC SRGTFLFATL AVLSILSLPR ATHGWANGGA TWYGGPSGDG SEGGACGYKS DVGQDPFSSM IAAAGAALFK KGKGCGACYQ
101: VRCKDNPECS GKHVTVVITD ECPDAQCQKR PHFDMSGTAF GALAKPGMAD KLRNAGVLNI EFERVPCKYH GKKISFKMDS GANPYYLAML VEYEAGDGDL
201: ASVEVMEAGG KKGSVKWEKM RQSWGALWCM DSKSGKPLEA PFSFRLTSGS GKVLVANNVV PAGWSAGKAY QSNVNYPA
101: VRCKDNPECS GKHVTVVITD ECPDAQCQKR PHFDMSGTAF GALAKPGMAD KLRNAGVLNI EFERVPCKYH GKKISFKMDS GANPYYLAML VEYEAGDGDL
201: ASVEVMEAGG KKGSVKWEKM RQSWGALWCM DSKSGKPLEA PFSFRLTSGS GKVLVANNVV PAGWSAGKAY QSNVNYPA
001: MQLFPVMLAT LCIVLQLLIG SSALATTNRH VSNSHWLPAV ATWYGSPNGD GSDGGACGYG TLVDVKPLHA RVGAVNPILF KNGEGCGACY KVRCLDKSIC
101: SRRAVTVIIT DECPGCSKTS THFDLSGAVF GRLAIAGESG PLRNRGLIPV IYRRTACKYR GKNIAFHVNE GSTDFWLSLL VEFEDGEGDI GSMHIRQAGA
201: REWLEMKHVW GANWCIIGGP LKGPFSIKLT TLSAGKTLSA TDVVPRNWAP KATYSSRLNF SPVL
101: SRRAVTVIIT DECPGCSKTS THFDLSGAVF GRLAIAGESG PLRNRGLIPV IYRRTACKYR GKNIAFHVNE GSTDFWLSLL VEFEDGEGDI GSMHIRQAGA
201: REWLEMKHVW GANWCIIGGP LKGPFSIKLT TLSAGKTLSA TDVVPRNWAP KATYSSRLNF SPVL
Arabidopsis Description
EXPB3EXPB3 [Source:UniProtKB/TrEMBL;Acc:A0A178USU9]
SUBAcon: [extracellular]
SUBAcon: [extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.