Factsheet for TraesCS2A01G413400.1

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 7
endoplasmic reticulum 4
vacuole 4
plasma membrane 4
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2D01G411200.1	Wheat	extracellular	99.23	99.23
TraesCS2B01G432100.1	Wheat	extracellular	97.32	97.32
HORVU2Hr1G097510.1	Barley	extracellular, mitochondrion, plastid	90.8	85.25
TraesCS6A01G249400.2	Wheat	extracellular	58.62	57.74
TraesCS2A01G080800.1	Wheat	extracellular	55.94	57.48
TraesCS2A01G081200.1	Wheat	extracellular	55.94	57.48
TraesCS6A01G249700.1	Wheat	extracellular	57.85	56.77
Os04t0552200-00	Rice	plasma membrane	58.62	55.64
TraesCS2A01G580300.1	Wheat	extracellular	52.49	55.02
TraesCS2A01G413600.1	Wheat	extracellular	55.17	54.96
TraesCS2A01G580200.1	Wheat	extracellular	52.11	54.18
TraesCS2A01G413500.1	Wheat	extracellular, plastid	58.24	54.09
TraesCS6A01G249200.1	Wheat	extracellular	58.62	53.31
TraesCS5A01G537300.1	Wheat	cytosol, extracellular, plastid	32.18	52.17
TraesCS6A01G249300.1	Wheat	extracellular	55.94	50.52
TraesCS2A01G105200.1	Wheat	extracellular	49.04	50.39
TraesCS3A01G488000.1	Wheat	extracellular	52.87	47.75
TraesCS1A01G212400.1	Wheat	extracellular	47.51	46.79
TraesCS1A01G212000.1	Wheat	extracellular	48.28	46.67
TraesCS3A01G011200.1	Wheat	cytosol	28.35	46.25
TraesCS6A01G032700.1	Wheat	extracellular	48.28	46.15
TraesCS3A01G011100.1	Wheat	extracellular	47.89	45.62
TraesCS1A01G212300.1	Wheat	extracellular	46.36	44.16
TraesCS1A01G212600.1	Wheat	extracellular	46.74	43.88
TraesCS1A01G208200.1	Wheat	extracellular	44.06	43.4
TraesCS1A01G212200.1	Wheat	extracellular	44.06	42.44
TraesCS5A01G538000.1	Wheat	extracellular	45.21	41.55
TraesCS2A01G458900.1	Wheat	extracellular	42.15	41.51
TraesCS6A01G235800.1	Wheat	extracellular	41.76	40.82
TraesCS6A01G217100.1	Wheat	extracellular	45.59	40.07
TraesCS5A01G530700.1	Wheat	extracellular	40.23	38.89
TraesCS3A01G480000.1	Wheat	extracellular	47.51	38.63
TraesCS3A01G479900.1	Wheat	extracellular	47.13	38.56
TraesCS5A01G530100.1	Wheat	extracellular	39.85	38.52
TraesCS2A01G373000.1	Wheat	extracellular	41.0	38.08
TraesCS5A01G073100.1	Wheat	extracellular, plasma membrane	45.98	35.09
TraesCS5A01G498900.1	Wheat	extracellular	30.65	29.09
TraesCS5A01G499100.1	Wheat	extracellular	27.2	28.4
TraesCS5A01G499300.1	Wheat	nucleus	29.5	28.21
TraesCS5A01G499200.1	Wheat	extracellular	27.2	27.0
TraesCS1A01G203200.1	Wheat	extracellular	27.2	25.18
TraesCS7A01G545900.1	Wheat	extracellular	26.44	22.33
TraesCS7A01G545800.1	Wheat	extracellular	25.29	21.93
TraesCS7A01G546000.1	Wheat	endoplasmic reticulum, extracellular	26.05	21.05
TraesCS7A01G546300.1	Wheat	endoplasmic reticulum, extracellular	24.52	19.94

Protein Annotations

Gene3D:2.40.40.10	Gene3D:2.60.40.760	MapMan:35.1	InterPro:Expan_Lol_pI	InterPro:Expansin/allergen_DPBB_dom	InterPro:Expansin_CBD
InterPro:Expansin_CBD_sf	GO:GO:0000003	GO:GO:0005575	GO:GO:0005576	GO:GO:0008150	GO:GO:0019953
InterPro:IPR007112	InterPro:IPR007117	InterPro:IPR036749	InterPro:IPR036908	InterPro:LolPI	PFAM:PF01357
PFAM:PF03330	PRINTS:PR00829	PRINTS:PR01225	PFscan:PS50842	PFscan:PS50843	PANTHER:PTHR31692
PANTHER:PTHR31692:SF22	InterPro:RlpA-like_DPBB	InterPro:RlpA-like_sf	SMART:SM00837	SUPFAM:SSF49590	SUPFAM:SSF50685
SignalP:SignalP-noTM	EnsemblPlantsGene:TraesCS2A01G413400	EnsemblPlants:TraesCS2A01G413400.1	:	:	:

Description

No Description!

Coordinates

chr2A:-:670665337..670666422

Molecular Weight (calculated)

27789.1 Da

IEP (calculated)

8.470

GRAVY (calculated)

-0.269

Length

261 amino acids

Sequence
(BLAST)

001: MACSRGIFLS ATFAVLSILS LPRATHGWAN GGATWYGGPN GDGSEGGACG YKSDVGQDPF SSLIAAGGVG IFKNGKGCGS CYQVRCKENP ECSGKHVTVV
101: ITDQCPDAQC QKRPHFDMSG TAFGAMAKPG MADKLRNAGV LNIEFERVPC KYHGKKISFK MDSGANPFYL AMLVEYEAGD GDLNSVEVME AGGKKGYAKW
201: EKMRQSWGAL WCMDSKTGKP LEAPFSFRLT SSSGKVLVAN NVVPAGWNAG KCYESKVNYP A

Best Arabidopsis Sequence Match ( AT1G65680.1 )
(BLAST)

001: MTILVVDRYY MLMNLLFALT CLLLNLTHCF SPKKFNISAA TTSDSDWSIA GSTWYGNPTG YGSDGGACGY GNAVAQPPFS KMVSAGGPSL FKSGKGCGAC
101: YQVKCTSKSA CSKNPVTVVI TDECPGCVKE SVHFDLSGTA FGAMAISGQD SQLRNVGELQ ILYKKVECNY IGKTVTFQVD KGSNANSFAV LVAYVNGDGE
201: IGRIELKQAL DSDKWLSMSQ SWGAVWKLDV SSPLRAPLSL RVTSLESGKT VVASNVIPAN WQPGAIYKSN VNF

Arabidopsis Description

EXPB2Putative expansin-B2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SHY6]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.